RNA–Protein interactions for RNA: ENST00000507785.2

MSX2-202, Transcript of msh homeobox 2, humanhuman

TSL 2 BASIC

Gene MSX2, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-202ENST00000507785 NFATC2IPQ8NCF5 419 aa37.26■■■■□ 3.56
MSX2-202ENST00000507785 QSER1Q2KHR3 1735 aa37.24■■■■□ 3.55
MSX2-202ENST00000507785 TUBGCP6Q96RT7 1819 aa37.24■■■■□ 3.55
MSX2-202ENST00000507785 GNAT3A8MTJ3 354 aa37.24■■■■□ 3.55
MSX2-202ENST00000507785 SLC52A2Q9HAB3 445 aa37.24■■■■□ 3.55
MSX2-202ENST00000507785 PLEKHF1Q96S99 279 aa37.23■■■■□ 3.55
MSX2-202ENST00000507785 LOC102724428A0A0B4J2F2 783 aa37.22■■■■□ 3.55
MSX2-202ENST00000507785 SIK1P57059 783 aa37.22■■■■□ 3.55
MSX2-202ENST00000507785 ZNF831Q5JPB2 1677 aa37.21■■■■□ 3.55
MSX2-202ENST00000507785 LRP5O75197 1615 aa37.21■■■■□ 3.55
MSX2-202ENST00000507785 IL17REQ8NFR9 667 aa37.21■■■■□ 3.55
MSX2-202ENST00000507785 SIPA1L3O60292 1781 aaPredicted RBP37.19■■■■□ 3.54
MSX2-202ENST00000507785 PDGFDQ9GZP0 370 aaPredicted RBP37.19■■■■□ 3.54
MSX2-202ENST00000507785 DLG5Q8TDM6 1919 aa37.18■■■■□ 3.54
MSX2-202ENST00000507785 C4BP0C0L5 1744 aa37.17■■■■□ 3.54
MSX2-202ENST00000507785 CEMIPQ8WUJ3 1361 aa37.17■■■■□ 3.54
MSX2-202ENST00000507785 SLC4A9Q96Q91 983 aa37.15■■■■□ 3.54
MSX2-202ENST00000507785 PNNQ9H307 717 aaKnown RBP37.15■■■■□ 3.54
MSX2-202ENST00000507785 HMGB2P26583 209 aaKnown RBP37.14■■■■□ 3.54
MSX2-202ENST00000507785 ITPK1Q13572 414 aa37.14■■■■□ 3.54
MSX2-202ENST00000507785 ATP6V1AP38606 617 aa37.12■■■■□ 3.53
MSX2-202ENST00000507785 NEFMP07197 916 aa37.11■■■■□ 3.53
MSX2-202ENST00000507785 LINC00116Q8NCU8 138 aa37.11■■■■□ 3.53
MSX2-202ENST00000507785 CICQ96RK0 1608 aaPredicted RBP37.1■■■■□ 3.53
MSX2-202ENST00000507785 COL5A3P25940 1745 aaPredicted RBP37.1■■■■□ 3.53
MSX2-202ENST00000507785 RBM42Q9BTD8 480 aaKnown RBP37.1■■■■□ 3.53
MSX2-202ENST00000507785 TFCP2L1Q9NZI6 479 aa37.1■■■■□ 3.53
MSX2-202ENST00000507785 PNPLA7Q6ZV29 1317 aa37.1■■■■□ 3.53
MSX2-202ENST00000507785 UBR2Q8IWV8 1755 aa37.09■■■■□ 3.53
MSX2-202ENST00000507785 HTATSF1O43719 755 aaKnown RBP37.09■■■■□ 3.53
MSX2-202ENST00000507785 UBR3Q6ZT12 1888 aa37.09■■■■□ 3.53
MSX2-202ENST00000507785 KCPQ6ZWJ8 1503 aa37.07■■■■□ 3.53
MSX2-202ENST00000507785 ANP32CO43423 234 aa37.07■■■■□ 3.52
MSX2-202ENST00000507785 PTCD1O75127 700 aaKnown RBP37.07■■■■□ 3.52
MSX2-202ENST00000507785 TEFQ10587 303 aa37.07■■■■□ 3.52
MSX2-202ENST00000507785 SLC39A6Q13433 755 aa37.07■■■■□ 3.52
MSX2-202ENST00000507785 WDR43Q15061 677 aaKnown RBP eCLIP37.07■■■■□ 3.52
MSX2-202ENST00000507785 NFE2L2Q16236 605 aa37.07■■■■□ 3.52
MSX2-202ENST00000507785 TJP1Q07157 1748 aa37.07■■■■□ 3.52
MSX2-202ENST00000507785 MAPK8IP3Q9UPT6 1336 aa37.07■■■■□ 3.52
MSX2-202ENST00000507785 RTF1Q92541 710 aaKnown RBP37.06■■■■□ 3.52
MSX2-202ENST00000507785 MCM10Q7L590 875 aa37.05■■■■□ 3.52
MSX2-202ENST00000507785 CCDC184Q52MB2 194 aa37.04■■■■□ 3.52
MSX2-202ENST00000507785 ADAMTS8Q9UP79 889 aa37.04■■■■□ 3.52
MSX2-202ENST00000507785 DCTN1Q14203 1278 aa37.03■■■■□ 3.52
MSX2-202ENST00000507785 MYH14Q7Z406 1995 aaKnown RBP37.03■■■■□ 3.52
MSX2-202ENST00000507785 ZBTB7AO95365 584 aa37.02■■■■□ 3.52
MSX2-202ENST00000507785 SPON1Q9HCB6 807 aa37.02■■■■□ 3.52
MSX2-202ENST00000507785 AMIGO3Q86WK7 504 aa37.01■■■■□ 3.52
MSX2-202ENST00000507785 AK7Q96M32 723 aa37.01■■■■□ 3.52
MSX2-202ENST00000507785 COL23A1Q86Y22 540 aaPredicted RBP36.99■■■■□ 3.51
MSX2-202ENST00000507785 CCDC146Q8IYE0 955 aa36.98■■■■□ 3.51
MSX2-202ENST00000507785 MTFR1LQ9H019 292 aa36.98■■■■□ 3.51
MSX2-202ENST00000507785 COL24A1Q17RW2 1714 aa36.98■■■■□ 3.51
MSX2-202ENST00000507785 CNTNAP4Q9C0A0 1308 aa36.96■■■■□ 3.51
MSX2-202ENST00000507785 ZNF790Q6PG37 636 aa36.96■■■■□ 3.51
MSX2-202ENST00000507785 SLC16A10Q8TF71 515 aa36.96■■■■□ 3.51
MSX2-202ENST00000507785 RUNDC1Q96C34 613 aa36.96■■■■□ 3.51
MSX2-202ENST00000507785 TMPOP42166 694 aaKnown RBP36.95■■■■□ 3.51
MSX2-202ENST00000507785 RC3H1Q5TC82 1133 aaKnown RBP36.95■■■■□ 3.51
MSX2-202ENST00000507785 ATF5Q9Y2D1 282 aaPredicted RBP36.95■■■■□ 3.51
MSX2-202ENST00000507785 FLAD1Q8NFF5 587 aa36.94■■■■□ 3.5
MSX2-202ENST00000507785 BTBD11A6QL63 1104 aa36.93■■■■□ 3.5
MSX2-202ENST00000507785 PTGER2P43116 358 aa36.93■■■■□ 3.5
MSX2-202ENST00000507785 SMIM5Q71RC9 77 aa36.93■■■■□ 3.5
MSX2-202ENST00000507785 TTC5Q8N0Z6 440 aa36.93■■■■□ 3.5
MSX2-202ENST00000507785 VSIG10Q8N0Z9 540 aa36.93■■■■□ 3.5
MSX2-202ENST00000507785 GNPATO15228 680 aa36.92■■■■□ 3.5
MSX2-202ENST00000507785 SSFA2P28290 1259 aa36.92■■■■□ 3.5
MSX2-202ENST00000507785 DNAJC10Q8IXB1 793 aa36.92■■■■□ 3.5
MSX2-202ENST00000507785 RIPK4P57078 832 aa36.91■■■■□ 3.5
MSX2-202ENST00000507785 ZNF496Q96IT1 587 aaPredicted RBP36.91■■■■□ 3.5
MSX2-202ENST00000507785 SGIP1Q9BQI5 828 aa36.91■■■■□ 3.5
MSX2-202ENST00000507785 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP36.9■■■■□ 3.5
MSX2-202ENST00000507785 KCNQ3O43525 872 aa36.9■■■■□ 3.5
MSX2-202ENST00000507785 THUMPD2Q9BTF0 503 aaKnown RBP36.89■■■■□ 3.5
MSX2-202ENST00000507785 PHF14O94880 888 aa36.88■■■■□ 3.49
MSX2-202ENST00000507785 CRKLP46109 303 aaKnown RBP36.88■■■■□ 3.49
MSX2-202ENST00000507785 TAF7Q15545 349 aaPredicted RBP36.88■■■■□ 3.49
MSX2-202ENST00000507785 HEG1Q9ULI3 1381 aa36.88■■■■□ 3.49
MSX2-202ENST00000507785 KDM3BQ7LBC6 1761 aa36.87■■■■□ 3.49
MSX2-202ENST00000507785 MSH5O43196 834 aa36.86■■■■□ 3.49
MSX2-202ENST00000507785 PNISRQ8TF01 805 aaKnown RBP36.86■■■■□ 3.49
MSX2-202ENST00000507785 MRS2Q9HD23 443 aa36.86■■■■□ 3.49
MSX2-202ENST00000507785 RRP7AQ9Y3A4 280 aaKnown RBP36.86■■■■□ 3.49
MSX2-202ENST00000507785 RPS6KA4O75676 772 aa36.85■■■■□ 3.49
MSX2-202ENST00000507785 CYP19A1P11511 503 aaPredicted RBP36.85■■■■□ 3.49
MSX2-202ENST00000507785 INTS5Q6P9B9 1019 aaKnown RBP36.85■■■■□ 3.49
MSX2-202ENST00000507785 FMNL2Q96PY5 1086 aa36.85■■■■□ 3.49
MSX2-202ENST00000507785 RTCBQ9Y3I0 505 aaKnown RBP36.85■■■■□ 3.49
MSX2-202ENST00000507785 LMOD3Q0VAK6 560 aa36.83■■■■□ 3.49
MSX2-202ENST00000507785 C4AP0C0L4 1744 aa36.82■■■■□ 3.48
MSX2-202ENST00000507785 ADRA2BP18089 450 aa36.8■■■■□ 3.48
MSX2-202ENST00000507785 NEUROD2Q15784 382 aa36.8■■■■□ 3.48
MSX2-202ENST00000507785 CCDC87Q9NVE4 849 aa36.8■■■■□ 3.48
MSX2-202ENST00000507785 MIS18AQ9NYP9 233 aa36.8■■■■□ 3.48
MSX2-202ENST00000507785 TRIM35Q9UPQ4 493 aa36.8■■■■□ 3.48
MSX2-202ENST00000507785 TRAPPC3LQ5T215 181 aa36.78■■■■□ 3.48
MSX2-202ENST00000507785 PPP1R1BQ9UD71 204 aaPredicted RBP36.78■■■■□ 3.48
MSX2-202ENST00000507785 ARHGEF1Q92888 912 aaKnown RBP36.77■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms