RNA–Protein interactions for RNA: ENST00000507655.5

SSBP2-208, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 845 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-208ENST00000507655 U2AF1Q01081 240 aaKnown RBP eCLIP24.13■■□□□ 1.45
SSBP2-208ENST00000507655 FCHSD2O94868 740 aa24.12■■□□□ 1.45
SSBP2-208ENST00000507655 HMGB2P26583 209 aaKnown RBP24.12■■□□□ 1.45
SSBP2-208ENST00000507655 PRKAR2BP31323 418 aa24.12■■□□□ 1.45
SSBP2-208ENST00000507655 CICQ96RK0 1608 aaPredicted RBP24.12■■□□□ 1.45
SSBP2-208ENST00000507655 LOC102724428A0A0B4J2F2 783 aa24.11■■□□□ 1.45
SSBP2-208ENST00000507655 RNMTO43148 476 aaKnown RBP24.11■■□□□ 1.45
SSBP2-208ENST00000507655 SIK1P57059 783 aa24.11■■□□□ 1.45
SSBP2-208ENST00000507655 GAS2L2Q8NHY3 880 aa24.11■■□□□ 1.45
SSBP2-208ENST00000507655 LGR6Q9HBX8 967 aa24.11■■□□□ 1.45
SSBP2-208ENST00000507655 NFATC2IPQ8NCF5 419 aa24.1■■□□□ 1.45
SSBP2-208ENST00000507655 PHACTR3Q96KR7 559 aa24.1■■□□□ 1.45
SSBP2-208ENST00000507655 MYBBP1AQ9BQG0 1328 aaKnown RBP24.1■■□□□ 1.45
SSBP2-208ENST00000507655 UBR2Q8IWV8 1755 aa24.09■■□□□ 1.45
SSBP2-208ENST00000507655 MAP3K5Q99683 1374 aa24.09■■□□□ 1.45
SSBP2-208ENST00000507655 SLC52A2Q9HAB3 445 aa24.09■■□□□ 1.45
SSBP2-208ENST00000507655 SPON1Q9HCB6 807 aa24.09■■□□□ 1.45
SSBP2-208ENST00000507655 MYH14Q7Z406 1995 aaKnown RBP24.09■■□□□ 1.45
SSBP2-208ENST00000507655 PNPLA7Q6ZV29 1317 aa24.09■■□□□ 1.45
SSBP2-208ENST00000507655 TJP1Q07157 1748 aa24.08■■□□□ 1.45
SSBP2-208ENST00000507655 ZNF316A6NFI3 1004 aaPredicted RBP24.08■■□□□ 1.45
SSBP2-208ENST00000507655 TFCP2L1Q9NZI6 479 aa24.07■■□□□ 1.44
SSBP2-208ENST00000507655 GNAT3A8MTJ3 354 aa24.06■■□□□ 1.44
SSBP2-208ENST00000507655 PRKRIP1Q9H875 184 aaPredicted RBP24.06■■□□□ 1.44
SSBP2-208ENST00000507655 ZBTB7AO95365 584 aa24.05■■□□□ 1.44
SSBP2-208ENST00000507655 ATP6V1AP38606 617 aa24.05■■□□□ 1.44
SSBP2-208ENST00000507655 ITPK1Q13572 414 aa24.05■■□□□ 1.44
SSBP2-208ENST00000507655 SLC4A9Q96Q91 983 aa24.05■■□□□ 1.44
SSBP2-208ENST00000507655 LINC00116Q8NCU8 138 aa24.04■■□□□ 1.44
SSBP2-208ENST00000507655 MTFR1LQ9H019 292 aa24.04■■□□□ 1.44
SSBP2-208ENST00000507655 IL17REQ8NFR9 667 aa24.03■■□□□ 1.44
SSBP2-208ENST00000507655 SLC16A10Q8TF71 515 aa24.02■■□□□ 1.44
SSBP2-208ENST00000507655 RBM42Q9BTD8 480 aaKnown RBP24.02■■□□□ 1.44
SSBP2-208ENST00000507655 CEMIPQ8WUJ3 1361 aa24.02■■□□□ 1.44
SSBP2-208ENST00000507655 KCPQ6ZWJ8 1503 aa24.01■■□□□ 1.43
SSBP2-208ENST00000507655 PTGER2P43116 358 aa24.01■■□□□ 1.43
SSBP2-208ENST00000507655 ATF5Q9Y2D1 282 aaPredicted RBP24.01■■□□□ 1.43
SSBP2-208ENST00000507655 AK7Q96M32 723 aa24■■□□□ 1.43
SSBP2-208ENST00000507655 PLEKHF1Q96S99 279 aa24■■□□□ 1.43
SSBP2-208ENST00000507655 SGIP1Q9BQI5 828 aa24■■□□□ 1.43
SSBP2-208ENST00000507655 COL23A1Q86Y22 540 aaPredicted RBP23.99■■□□□ 1.43
SSBP2-208ENST00000507655 PTCD1O75127 700 aaKnown RBP23.98■■□□□ 1.43
SSBP2-208ENST00000507655 FLAD1Q8NFF5 587 aa23.98■■□□□ 1.43
SSBP2-208ENST00000507655 C4AP0C0L4 1744 aa23.97■■□□□ 1.43
SSBP2-208ENST00000507655 AMIGO3Q86WK7 504 aa23.97■■□□□ 1.43
SSBP2-208ENST00000507655 TEFQ10587 303 aa23.96■■□□□ 1.43
SSBP2-208ENST00000507655 SLC39A6Q13433 755 aa23.96■■□□□ 1.43
SSBP2-208ENST00000507655 PNNQ9H307 717 aaKnown RBP23.96■■□□□ 1.43
SSBP2-208ENST00000507655 CNTNAP4Q9C0A0 1308 aa23.95■■□□□ 1.42
SSBP2-208ENST00000507655 HTATSF1O43719 755 aaKnown RBP23.95■■□□□ 1.42
SSBP2-208ENST00000507655 NEFMP07197 916 aa23.95■■□□□ 1.42
SSBP2-208ENST00000507655 SSFA2P28290 1259 aa23.95■■□□□ 1.42
SSBP2-208ENST00000507655 RC3H1Q5TC82 1133 aaKnown RBP23.94■■□□□ 1.42
SSBP2-208ENST00000507655 PPP1R1BQ9UD71 204 aaPredicted RBP23.94■■□□□ 1.42
SSBP2-208ENST00000507655 RTF1Q92541 710 aaKnown RBP23.93■■□□□ 1.42
SSBP2-208ENST00000507655 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.92■■□□□ 1.42
SSBP2-208ENST00000507655 GNPATO15228 680 aa23.92■■□□□ 1.42
SSBP2-208ENST00000507655 MSH5O43196 834 aa23.91■■□□□ 1.42
SSBP2-208ENST00000507655 SMIM5Q71RC9 77 aa23.91■■□□□ 1.42
SSBP2-208ENST00000507655 MCM10Q7L590 875 aa23.91■■□□□ 1.42
SSBP2-208ENST00000507655 KDM3BQ7LBC6 1761 aa23.91■■□□□ 1.42
SSBP2-208ENST00000507655 MAPK8IP3Q9UPT6 1336 aa23.9■■□□□ 1.42
SSBP2-208ENST00000507655 PHF14O94880 888 aa23.9■■□□□ 1.42
SSBP2-208ENST00000507655 NFE2L2Q16236 605 aa23.9■■□□□ 1.42
SSBP2-208ENST00000507655 ZNF790Q6PG37 636 aa23.9■■□□□ 1.42
SSBP2-208ENST00000507655 VSIG10Q8N0Z9 540 aa23.9■■□□□ 1.42
SSBP2-208ENST00000507655 TTC5Q8N0Z6 440 aa23.89■■□□□ 1.41
SSBP2-208ENST00000507655 RTCBQ9Y3I0 505 aaKnown RBP23.89■■□□□ 1.41
SSBP2-208ENST00000507655 RPS6KA4O75676 772 aa23.88■■□□□ 1.41
SSBP2-208ENST00000507655 CRKLP46109 303 aaKnown RBP23.88■■□□□ 1.41
SSBP2-208ENST00000507655 DCTN1Q14203 1278 aa23.88■■□□□ 1.41
SSBP2-208ENST00000507655 DNAJC10Q8IXB1 793 aa23.88■■□□□ 1.41
SSBP2-208ENST00000507655 ARXQ96QS3 562 aa23.87■■□□□ 1.41
SSBP2-208ENST00000507655 BTBD11A6QL63 1104 aa23.86■■□□□ 1.41
SSBP2-208ENST00000507655 ADRA2BP18089 450 aa23.86■■□□□ 1.41
SSBP2-208ENST00000507655 POLD1P28340 1107 aa23.86■■□□□ 1.41
SSBP2-208ENST00000507655 WDR43Q15061 677 aaKnown RBP eCLIP23.86■■□□□ 1.41
SSBP2-208ENST00000507655 ZNF496Q96IT1 587 aaPredicted RBP23.86■■□□□ 1.41
SSBP2-208ENST00000507655 HEG1Q9ULI3 1381 aa23.86■■□□□ 1.41
SSBP2-208ENST00000507655 CYP19A1P11511 503 aaPredicted RBP23.85■■□□□ 1.41
SSBP2-208ENST00000507655 TRAPPC3LQ5T215 181 aa23.84■■□□□ 1.41
SSBP2-208ENST00000507655 INTS5Q6P9B9 1019 aaKnown RBP23.84■■□□□ 1.41
SSBP2-208ENST00000507655 ADAMTS8Q9UP79 889 aa23.84■■□□□ 1.41
SSBP2-208ENST00000507655 KCNQ3O43525 872 aa23.83■■□□□ 1.41
SSBP2-208ENST00000507655 MSL1Q68DK7 614 aa23.83■■□□□ 1.41
SSBP2-208ENST00000507655 ARHGEF1Q92888 912 aaKnown RBP23.83■■□□□ 1.41
SSBP2-208ENST00000507655 FHDC1Q9C0D6 1143 aaPredicted RBP23.83■■□□□ 1.41
SSBP2-208ENST00000507655 CCDC87Q9NVE4 849 aa23.83■■□□□ 1.41
SSBP2-208ENST00000507655 LAMB4A4D0S4 1761 aa23.83■■□□□ 1.4
SSBP2-208ENST00000507655 TMPOP42166 694 aaKnown RBP23.82■■□□□ 1.4
SSBP2-208ENST00000507655 TAF7Q15545 349 aaPredicted RBP23.82■■□□□ 1.4
SSBP2-208ENST00000507655 FMNL2Q96PY5 1086 aa23.82■■□□□ 1.4
SSBP2-208ENST00000507655 CCDC146Q8IYE0 955 aa23.81■■□□□ 1.4
SSBP2-208ENST00000507655 RUNDC1Q96C34 613 aa23.81■■□□□ 1.4
SSBP2-208ENST00000507655 SYT17Q9BSW7 474 aa23.81■■□□□ 1.4
SSBP2-208ENST00000507655 TEX13AQ9BXU3 409 aaPredicted RBP23.8■■□□□ 1.4
SSBP2-208ENST00000507655 ANP32CO43423 234 aa23.79■■□□□ 1.4
SSBP2-208ENST00000507655 RIPK4P57078 832 aa23.79■■□□□ 1.4
SSBP2-208ENST00000507655 SOS1Q07889 1333 aaPredicted RBP23.79■■□□□ 1.4
SSBP2-208ENST00000507655 KIF13BQ9NQT8 1826 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 281.9 ms