RNA–Protein interactions for RNA: ENST00000506909.5

PDCD6-204, Transcript of programmed cell death 6, humanhuman

TSL 3

Gene PDCD6, Length 458 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-204ENST00000506909 PRKRIP1Q9H875 184 aaPredicted RBP18.11■□□□□ 0.49
PDCD6-204ENST00000506909 ATG3Q9NT62 314 aa18.11■□□□□ 0.49
PDCD6-204ENST00000506909 DLG5Q8TDM6 1919 aa18.1■□□□□ 0.49
PDCD6-204ENST00000506909 MRC1P22897 1456 aa18.1■□□□□ 0.49
PDCD6-204ENST00000506909 RNMTO43148 476 aaKnown RBP18.1■□□□□ 0.49
PDCD6-204ENST00000506909 ZNF827Q17R98 1081 aa18.1■□□□□ 0.49
PDCD6-204ENST00000506909 NFATC2IPQ8NCF5 419 aa18.1■□□□□ 0.49
PDCD6-204ENST00000506909 PHACTR3Q96KR7 559 aa18.1■□□□□ 0.49
PDCD6-204ENST00000506909 LGR6Q9HBX8 967 aa18.1■□□□□ 0.49
PDCD6-204ENST00000506909 SLC52A2Q9HAB3 445 aa18.09■□□□□ 0.49
PDCD6-204ENST00000506909 SIPA1L3O60292 1781 aaPredicted RBP18.09■□□□□ 0.49
PDCD6-204ENST00000506909 C4BP0C0L5 1744 aa18.09■□□□□ 0.49
PDCD6-204ENST00000506909 LOC102724428A0A0B4J2F2 783 aa18.08■□□□□ 0.48
PDCD6-204ENST00000506909 GNAT3A8MTJ3 354 aa18.08■□□□□ 0.48
PDCD6-204ENST00000506909 SIK1P57059 783 aa18.08■□□□□ 0.48
PDCD6-204ENST00000506909 UBR3Q6ZT12 1888 aa18.07■□□□□ 0.48
PDCD6-204ENST00000506909 MAP3K5Q99683 1374 aa18.07■□□□□ 0.48
PDCD6-204ENST00000506909 COL5A3P25940 1745 aaPredicted RBP18.06■□□□□ 0.48
PDCD6-204ENST00000506909 PDGFDQ9GZP0 370 aaPredicted RBP18.06■□□□□ 0.48
PDCD6-204ENST00000506909 PNNQ9H307 717 aaKnown RBP18.05■□□□□ 0.48
PDCD6-204ENST00000506909 SPON1Q9HCB6 807 aa18.05■□□□□ 0.48
PDCD6-204ENST00000506909 TFCP2L1Q9NZI6 479 aa18.05■□□□□ 0.48
PDCD6-204ENST00000506909 CICQ96RK0 1608 aaPredicted RBP18.05■□□□□ 0.48
PDCD6-204ENST00000506909 COL24A1Q17RW2 1714 aa18.04■□□□□ 0.48
PDCD6-204ENST00000506909 ATP6V1AP38606 617 aa18.04■□□□□ 0.48
PDCD6-204ENST00000506909 IL17REQ8NFR9 667 aa18.04■□□□□ 0.48
PDCD6-204ENST00000506909 PLEKHF1Q96S99 279 aa18.04■□□□□ 0.48
PDCD6-204ENST00000506909 UBR2Q8IWV8 1755 aa18.04■□□□□ 0.48
PDCD6-204ENST00000506909 PNPLA7Q6ZV29 1317 aa18.03■□□□□ 0.48
PDCD6-204ENST00000506909 MYH14Q7Z406 1995 aaKnown RBP18.03■□□□□ 0.48
PDCD6-204ENST00000506909 NEFMP07197 916 aa18.03■□□□□ 0.48
PDCD6-204ENST00000506909 SLC4A9Q96Q91 983 aa18.03■□□□□ 0.48
PDCD6-204ENST00000506909 CEMIPQ8WUJ3 1361 aa18.03■□□□□ 0.48
PDCD6-204ENST00000506909 ITPK1Q13572 414 aa18.02■□□□□ 0.48
PDCD6-204ENST00000506909 SLC16A10Q8TF71 515 aa18.02■□□□□ 0.48
PDCD6-204ENST00000506909 RBM42Q9BTD8 480 aaKnown RBP18.02■□□□□ 0.48
PDCD6-204ENST00000506909 HTATSF1O43719 755 aaKnown RBP18.01■□□□□ 0.47
PDCD6-204ENST00000506909 LINC00116Q8NCU8 138 aa18.01■□□□□ 0.47
PDCD6-204ENST00000506909 MTFR1LQ9H019 292 aa18.01■□□□□ 0.47
PDCD6-204ENST00000506909 TJP1Q07157 1748 aa18.01■□□□□ 0.47
PDCD6-204ENST00000506909 TEFQ10587 303 aa18■□□□□ 0.47
PDCD6-204ENST00000506909 FLAD1Q8NFF5 587 aa18■□□□□ 0.47
PDCD6-204ENST00000506909 PTCD1O75127 700 aaKnown RBP17.99■□□□□ 0.47
PDCD6-204ENST00000506909 ZBTB7AO95365 584 aa17.99■□□□□ 0.47
PDCD6-204ENST00000506909 RTF1Q92541 710 aaKnown RBP17.99■□□□□ 0.47
PDCD6-204ENST00000506909 AK7Q96M32 723 aa17.99■□□□□ 0.47
PDCD6-204ENST00000506909 SLC39A6Q13433 755 aa17.98■□□□□ 0.47
PDCD6-204ENST00000506909 RC3H1Q5TC82 1133 aaKnown RBP17.98■□□□□ 0.47
PDCD6-204ENST00000506909 COL23A1Q86Y22 540 aaPredicted RBP17.98■□□□□ 0.47
PDCD6-204ENST00000506909 KCPQ6ZWJ8 1503 aa17.98■□□□□ 0.47
PDCD6-204ENST00000506909 PTGER2P43116 358 aa17.97■□□□□ 0.47
PDCD6-204ENST00000506909 ATF5Q9Y2D1 282 aaPredicted RBP17.97■□□□□ 0.47
PDCD6-204ENST00000506909 MAPK8IP3Q9UPT6 1336 aa17.97■□□□□ 0.47
PDCD6-204ENST00000506909 SSFA2P28290 1259 aa17.96■□□□□ 0.47
PDCD6-204ENST00000506909 WDR43Q15061 677 aaKnown RBP eCLIP17.96■□□□□ 0.47
PDCD6-204ENST00000506909 NFE2L2Q16236 605 aa17.96■□□□□ 0.47
PDCD6-204ENST00000506909 SGIP1Q9BQI5 828 aa17.96■□□□□ 0.47
PDCD6-204ENST00000506909 CNTNAP4Q9C0A0 1308 aa17.96■□□□□ 0.46
PDCD6-204ENST00000506909 MCM10Q7L590 875 aa17.95■□□□□ 0.46
PDCD6-204ENST00000506909 VSIG10Q8N0Z9 540 aa17.95■□□□□ 0.46
PDCD6-204ENST00000506909 GNPATO15228 680 aa17.94■□□□□ 0.46
PDCD6-204ENST00000506909 ZNF790Q6PG37 636 aa17.94■□□□□ 0.46
PDCD6-204ENST00000506909 AMIGO3Q86WK7 504 aa17.94■□□□□ 0.46
PDCD6-204ENST00000506909 TTC5Q8N0Z6 440 aa17.94■□□□□ 0.46
PDCD6-204ENST00000506909 ADAMTS8Q9UP79 889 aa17.94■□□□□ 0.46
PDCD6-204ENST00000506909 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.93■□□□□ 0.46
PDCD6-204ENST00000506909 MSH5O43196 834 aa17.93■□□□□ 0.46
PDCD6-204ENST00000506909 ANP32CO43423 234 aa17.93■□□□□ 0.46
PDCD6-204ENST00000506909 DCTN1Q14203 1278 aa17.93■□□□□ 0.46
PDCD6-204ENST00000506909 PPP1R1BQ9UD71 204 aaPredicted RBP17.93■□□□□ 0.46
PDCD6-204ENST00000506909 BTBD11A6QL63 1104 aa17.92■□□□□ 0.46
PDCD6-204ENST00000506909 RPS6KA4O75676 772 aa17.92■□□□□ 0.46
PDCD6-204ENST00000506909 RTCBQ9Y3I0 505 aaKnown RBP17.92■□□□□ 0.46
PDCD6-204ENST00000506909 C4AP0C0L4 1744 aa17.92■□□□□ 0.46
PDCD6-204ENST00000506909 PHF14O94880 888 aa17.91■□□□□ 0.46
PDCD6-204ENST00000506909 CRKLP46109 303 aaKnown RBP17.91■□□□□ 0.46
PDCD6-204ENST00000506909 DNAJC10Q8IXB1 793 aa17.91■□□□□ 0.46
PDCD6-204ENST00000506909 RUNDC1Q96C34 613 aa17.91■□□□□ 0.46
PDCD6-204ENST00000506909 ZNF496Q96IT1 587 aaPredicted RBP17.91■□□□□ 0.46
PDCD6-204ENST00000506909 KDM3BQ7LBC6 1761 aa17.91■□□□□ 0.46
PDCD6-204ENST00000506909 DCAF8L1A6NGE4 600 aa17.9■□□□□ 0.46
PDCD6-204ENST00000506909 CYP19A1P11511 503 aaPredicted RBP17.9■□□□□ 0.46
PDCD6-204ENST00000506909 ADRA2BP18089 450 aa17.9■□□□□ 0.46
PDCD6-204ENST00000506909 TMPOP42166 694 aaKnown RBP17.9■□□□□ 0.46
PDCD6-204ENST00000506909 C1QTNF8P60827 252 aa17.9■□□□□ 0.46
PDCD6-204ENST00000506909 TAF7Q15545 349 aaPredicted RBP17.9■□□□□ 0.46
PDCD6-204ENST00000506909 ZNF784Q8NCA9 323 aaPredicted RBP17.9■□□□□ 0.46
PDCD6-204ENST00000506909 HEG1Q9ULI3 1381 aa17.9■□□□□ 0.46
PDCD6-204ENST00000506909 POLD1P28340 1107 aa17.89■□□□□ 0.45
PDCD6-204ENST00000506909 RIPK4P57078 832 aa17.89■□□□□ 0.45
PDCD6-204ENST00000506909 TRAPPC3LQ5T215 181 aa17.89■□□□□ 0.45
PDCD6-204ENST00000506909 INTS5Q6P9B9 1019 aaKnown RBP17.89■□□□□ 0.45
PDCD6-204ENST00000506909 SMIM5Q71RC9 77 aa17.89■□□□□ 0.45
PDCD6-204ENST00000506909 FMNL2Q96PY5 1086 aa17.89■□□□□ 0.45
PDCD6-204ENST00000506909 TEX13AQ9BXU3 409 aaPredicted RBP17.89■□□□□ 0.45
PDCD6-204ENST00000506909 CCDC184Q52MB2 194 aa17.88■□□□□ 0.45
PDCD6-204ENST00000506909 CCDC146Q8IYE0 955 aa17.88■□□□□ 0.45
PDCD6-204ENST00000506909 ARXQ96QS3 562 aa17.88■□□□□ 0.45
PDCD6-204ENST00000506909 CCDC87Q9NVE4 849 aa17.88■□□□□ 0.45
PDCD6-204ENST00000506909 KCNQ3O43525 872 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms