RNA–Protein interactions for RNA: ENST00000506617.1

DSP-203, Transcript of desmoplakin, humanhuman

TSL 3

Gene DSP, Length 754 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-203ENST00000506617 GAS2L2Q8NHY3 880 aa19.59■□□□□ 0.73
DSP-203ENST00000506617 SMARCC1Q92922 1105 aaPredicted RBP19.59■□□□□ 0.73
DSP-203ENST00000506617 CABP4P57796 275 aa19.58■□□□□ 0.72
DSP-203ENST00000506617 SLC15A2Q16348 729 aa19.58■□□□□ 0.72
DSP-203ENST00000506617 ZNF827Q17R98 1081 aa19.58■□□□□ 0.72
DSP-203ENST00000506617 PHACTR3Q96KR7 559 aa19.58■□□□□ 0.72
DSP-203ENST00000506617 PLEKHF1Q96S99 279 aa19.58■□□□□ 0.72
DSP-203ENST00000506617 ASAP1Q9ULH1 1129 aa19.58■□□□□ 0.72
DSP-203ENST00000506617 MAP3K5Q99683 1374 aa19.57■□□□□ 0.72
DSP-203ENST00000506617 DLG5Q8TDM6 1919 aa19.57■□□□□ 0.72
DSP-203ENST00000506617 SIPA1L3O60292 1781 aaPredicted RBP19.57■□□□□ 0.72
DSP-203ENST00000506617 RNMTO43148 476 aaKnown RBP19.56■□□□□ 0.72
DSP-203ENST00000506617 NEFMP07197 916 aa19.56■□□□□ 0.72
DSP-203ENST00000506617 LGR6Q9HBX8 967 aa19.56■□□□□ 0.72
DSP-203ENST00000506617 ATG3Q9NT62 314 aa19.56■□□□□ 0.72
DSP-203ENST00000506617 C4BP0C0L5 1744 aa19.56■□□□□ 0.72
DSP-203ENST00000506617 AKT1S1Q96B36 256 aa19.55■□□□□ 0.72
DSP-203ENST00000506617 RUNDC1Q96C34 613 aa19.55■□□□□ 0.72
DSP-203ENST00000506617 ZNF831Q5JPB2 1677 aa19.55■□□□□ 0.72
DSP-203ENST00000506617 NCBP3Q53F19 620 aaKnown RBP19.54■□□□□ 0.72
DSP-203ENST00000506617 NFATC2IPQ8NCF5 419 aa19.54■□□□□ 0.72
DSP-203ENST00000506617 LOC102724428A0A0B4J2F2 783 aa19.53■□□□□ 0.72
DSP-203ENST00000506617 GNAT3A8MTJ3 354 aa19.53■□□□□ 0.72
DSP-203ENST00000506617 SIK1P57059 783 aa19.53■□□□□ 0.72
DSP-203ENST00000506617 PDGFDQ9GZP0 370 aaPredicted RBP19.53■□□□□ 0.72
DSP-203ENST00000506617 SLC52A2Q9HAB3 445 aa19.53■□□□□ 0.72
DSP-203ENST00000506617 COL5A3P25940 1745 aaPredicted RBP19.53■□□□□ 0.72
DSP-203ENST00000506617 UBR3Q6ZT12 1888 aa19.52■□□□□ 0.71
DSP-203ENST00000506617 MAPK8IP3Q9UPT6 1336 aa19.51■□□□□ 0.71
DSP-203ENST00000506617 CICQ96RK0 1608 aaPredicted RBP19.51■□□□□ 0.71
DSP-203ENST00000506617 TJP1Q07157 1748 aa19.51■□□□□ 0.71
DSP-203ENST00000506617 NGEFQ8N5V2 710 aa19.51■□□□□ 0.71
DSP-203ENST00000506617 UBR2Q8IWV8 1755 aa19.51■□□□□ 0.71
DSP-203ENST00000506617 RBM42Q9BTD8 480 aaKnown RBP19.5■□□□□ 0.71
DSP-203ENST00000506617 CEMIPQ8WUJ3 1361 aa19.49■□□□□ 0.71
DSP-203ENST00000506617 HTATSF1O43719 755 aaKnown RBP19.49■□□□□ 0.71
DSP-203ENST00000506617 ATP6V1AP38606 617 aa19.49■□□□□ 0.71
DSP-203ENST00000506617 ITPK1Q13572 414 aa19.49■□□□□ 0.71
DSP-203ENST00000506617 FAM9BQ8IZU0 186 aa19.49■□□□□ 0.71
DSP-203ENST00000506617 IL17REQ8NFR9 667 aa19.49■□□□□ 0.71
DSP-203ENST00000506617 PNPLA7Q6ZV29 1317 aa19.49■□□□□ 0.71
DSP-203ENST00000506617 KCPQ6ZWJ8 1503 aa19.48■□□□□ 0.71
DSP-203ENST00000506617 NFE2L2Q16236 605 aa19.48■□□□□ 0.71
DSP-203ENST00000506617 LINC00116Q8NCU8 138 aa19.48■□□□□ 0.71
DSP-203ENST00000506617 SLC4A9Q96Q91 983 aa19.48■□□□□ 0.71
DSP-203ENST00000506617 TFCP2L1Q9NZI6 479 aa19.48■□□□□ 0.71
DSP-203ENST00000506617 SRCAPQ6ZRS2 3230 aa19.47■□□□□ 0.71
DSP-203ENST00000506617 TEFQ10587 303 aa19.47■□□□□ 0.71
DSP-203ENST00000506617 PTCD1O75127 700 aaKnown RBP19.46■□□□□ 0.71
DSP-203ENST00000506617 ZBTB7AO95365 584 aa19.46■□□□□ 0.71
DSP-203ENST00000506617 SLC39A6Q13433 755 aa19.46■□□□□ 0.71
DSP-203ENST00000506617 MYH14Q7Z406 1995 aaKnown RBP19.46■□□□□ 0.71
DSP-203ENST00000506617 HMGB2P26583 209 aaKnown RBP19.45■□□□□ 0.7
DSP-203ENST00000506617 TMPOP42166 694 aaKnown RBP19.45■□□□□ 0.7
DSP-203ENST00000506617 RTF1Q92541 710 aaKnown RBP19.45■□□□□ 0.7
DSP-203ENST00000506617 AK7Q96M32 723 aa19.45■□□□□ 0.7
DSP-203ENST00000506617 LMOD3Q0VAK6 560 aa19.44■□□□□ 0.7
DSP-203ENST00000506617 DCTN1Q14203 1278 aa19.44■□□□□ 0.7
DSP-203ENST00000506617 MCM10Q7L590 875 aa19.44■□□□□ 0.7
DSP-203ENST00000506617 CCDC146Q8IYE0 955 aa19.44■□□□□ 0.7
DSP-203ENST00000506617 SPON1Q9HCB6 807 aa19.44■□□□□ 0.7
DSP-203ENST00000506617 COL24A1Q17RW2 1714 aa19.44■□□□□ 0.7
DSP-203ENST00000506617 CCDC27Q2M243 656 aa19.43■□□□□ 0.7
DSP-203ENST00000506617 APAF1O14727 1248 aa19.42■□□□□ 0.7
DSP-203ENST00000506617 AMIGO3Q86WK7 504 aa19.42■□□□□ 0.7
DSP-203ENST00000506617 MTFR1LQ9H019 292 aa19.42■□□□□ 0.7
DSP-203ENST00000506617 RIPK4P57078 832 aa19.41■□□□□ 0.7
DSP-203ENST00000506617 COL23A1Q86Y22 540 aaPredicted RBP19.41■□□□□ 0.7
DSP-203ENST00000506617 ATF5Q9Y2D1 282 aaPredicted RBP19.41■□□□□ 0.7
DSP-203ENST00000506617 C4AP0C0L4 1744 aa19.4■□□□□ 0.7
DSP-203ENST00000506617 GNPATO15228 680 aa19.4■□□□□ 0.7
DSP-203ENST00000506617 PHF14O94880 888 aa19.4■□□□□ 0.7
DSP-203ENST00000506617 TTC5Q8N0Z6 440 aa19.4■□□□□ 0.7
DSP-203ENST00000506617 CNTNAP4Q9C0A0 1308 aa19.4■□□□□ 0.7
DSP-203ENST00000506617 KDM3BQ7LBC6 1761 aa19.39■□□□□ 0.7
DSP-203ENST00000506617 MSH5O43196 834 aa19.39■□□□□ 0.69
DSP-203ENST00000506617 ZNF790Q6PG37 636 aa19.39■□□□□ 0.69
DSP-203ENST00000506617 SMIM5Q71RC9 77 aa19.39■□□□□ 0.69
DSP-203ENST00000506617 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.38■□□□□ 0.69
DSP-203ENST00000506617 BTBD11A6QL63 1104 aa19.38■□□□□ 0.69
DSP-203ENST00000506617 PTGER2P43116 358 aa19.38■□□□□ 0.69
DSP-203ENST00000506617 DNAJC10Q8IXB1 793 aa19.38■□□□□ 0.69
DSP-203ENST00000506617 FLAD1Q8NFF5 587 aa19.38■□□□□ 0.69
DSP-203ENST00000506617 SLC16A10Q8TF71 515 aa19.38■□□□□ 0.69
DSP-203ENST00000506617 SSFA2P28290 1259 aa19.37■□□□□ 0.69
DSP-203ENST00000506617 KCNQ3O43525 872 aa19.36■□□□□ 0.69
DSP-203ENST00000506617 CRKLP46109 303 aaKnown RBP19.36■□□□□ 0.69
DSP-203ENST00000506617 CALD1Q05682 793 aaKnown RBP19.36■□□□□ 0.69
DSP-203ENST00000506617 RC3H1Q5TC82 1133 aaKnown RBP19.36■□□□□ 0.69
DSP-203ENST00000506617 ZNF496Q96IT1 587 aaPredicted RBP19.36■□□□□ 0.69
DSP-203ENST00000506617 SGIP1Q9BQI5 828 aa19.36■□□□□ 0.69
DSP-203ENST00000506617 THUMPD2Q9BTF0 503 aaKnown RBP19.36■□□□□ 0.69
DSP-203ENST00000506617 TRIM35Q9UPQ4 493 aa19.36■□□□□ 0.69
DSP-203ENST00000506617 HEG1Q9ULI3 1381 aa19.35■□□□□ 0.69
DSP-203ENST00000506617 VSIG10Q8N0Z9 540 aa19.35■□□□□ 0.69
DSP-203ENST00000506617 BABAM1Q9NWV8 329 aa19.35■□□□□ 0.69
DSP-203ENST00000506617 PPP1R1BQ9UD71 204 aaPredicted RBP19.35■□□□□ 0.69
DSP-203ENST00000506617 RRP7AQ9Y3A4 280 aaKnown RBP19.35■□□□□ 0.69
DSP-203ENST00000506617 RTCBQ9Y3I0 505 aaKnown RBP19.34■□□□□ 0.69
DSP-203ENST00000506617 RPS6KA4O75676 772 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms