RNA–Protein interactions for RNA: ENST00000506617.1

DSP-203, Transcript of desmoplakin, humanhuman

TSL 3

Gene DSP, Length 754 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-203ENST00000506617 NISCHQ9Y2I1 1504 aa35.78■■■■□ 3.32
DSP-203ENST00000506617 CCDC180Q9P1Z9 1646 aa31.88■■■□□ 2.69
DSP-203ENST00000506617 ABCC9O60706 1549 aa31.15■■■□□ 2.58
DSP-203ENST00000506617 RB1CC1Q8TDY2 1594 aa29.96■■■□□ 2.39
DSP-203ENST00000506617 NACADO15069 1562 aa29.91■■■□□ 2.38
DSP-203ENST00000506617 ZCCHC6Q5VYS8 1495 aaKnown RBP29.83■■■□□ 2.37
DSP-203ENST00000506617 DCAF8L2P0C7V8 631 aa29.81■■■□□ 2.36
DSP-203ENST00000506617 MYO15BQ96JP2 1530 aa29.71■■■□□ 2.35
DSP-203ENST00000506617 DCAF1Q9Y4B6 1507 aa29.6■■■□□ 2.33
DSP-203ENST00000506617 UNC13AQ9UPW8 1703 aa29.39■■■□□ 2.3
DSP-203ENST00000506617 SCRIBQ14160 1630 aa29.09■■■□□ 2.25
DSP-203ENST00000506617 BICRAQ9NZM4 1560 aa29.08■■■□□ 2.25
DSP-203ENST00000506617 PABPN1Q86U42 306 aaKnown RBP eCLIP29.05■■■□□ 2.24
DSP-203ENST00000506617 SHROOM4Q9ULL8 1493 aa28.73■■■□□ 2.19
DSP-203ENST00000506617 DNAJC5BQ9UF47 199 aa28.53■■■□□ 2.16
DSP-203ENST00000506617 EIF4G1Q04637 1599 aaKnown RBP28.31■■■□□ 2.12
DSP-203ENST00000506617 CC2D2AQ9P2K1 1620 aa28.2■■■□□ 2.1
DSP-203ENST00000506617 CECR2Q9BXF3 1484 aa27.97■■■□□ 2.07
DSP-203ENST00000506617 SMARCA4P51532 1647 aa27.81■■■□□ 2.04
DSP-203ENST00000506617 BAZ1AQ9NRL2 1556 aaPredicted RBP27.74■■■□□ 2.03
DSP-203ENST00000506617 ATAD2BQ9ULI0 1458 aa27.61■■■□□ 2.01
DSP-203ENST00000506617 MROH2BQ7Z745 1585 aa27.6■■■□□ 2.01
DSP-203ENST00000506617 SMARCA2P51531 1590 aa27.59■■■□□ 2.01
DSP-203ENST00000506617 NCAPD3P42695 1498 aa27.57■■■□□ 2
DSP-203ENST00000506617 PEG3Q9GZU2 1588 aa27.52■■■□□ 2
DSP-203ENST00000506617 HMGXB3Q12766 1538 aa27.49■■□□□ 1.99
DSP-203ENST00000506617 BAZ1BQ9UIG0 1483 aaKnown RBP27.39■■□□□ 1.98
DSP-203ENST00000506617 WIZO95785 1651 aa27.33■■□□□ 1.97
DSP-203ENST00000506617 RSF1Q96T23 1441 aaPredicted RBP27.24■■□□□ 1.95
DSP-203ENST00000506617 TOP2AP11388 1531 aaKnown RBP27.02■■□□□ 1.92
DSP-203ENST00000506617 NESP48681 1621 aa26.96■■□□□ 1.91
DSP-203ENST00000506617 LAMC3Q9Y6N6 1575 aa26.89■■□□□ 1.9
DSP-203ENST00000506617 ERCC6Q03468 1493 aa26.83■■□□□ 1.89
DSP-203ENST00000506617 CADPSQ9ULU8 1353 aa26.75■■□□□ 1.87
DSP-203ENST00000506617 KIF21AQ7Z4S6 1674 aa26.71■■□□□ 1.87
DSP-203ENST00000506617 CCDC88BA6NC98 1476 aa26.66■■□□□ 1.86
DSP-203ENST00000506617 PDS5BQ9NTI5 1447 aa26.65■■□□□ 1.86
DSP-203ENST00000506617 CFTRP13569 1480 aa26.62■■□□□ 1.85
DSP-203ENST00000506617 THOC2Q8NI27 1593 aaKnown RBP26.6■■□□□ 1.85
DSP-203ENST00000506617 PRDM2Q13029 1718 aa26.56■■□□□ 1.84
DSP-203ENST00000506617 CUX2O14529 1486 aa26.55■■□□□ 1.84
DSP-203ENST00000506617 SUPT5HO00267 1087 aaKnown RBP26.51■■□□□ 1.83
DSP-203ENST00000506617 FANCD2Q9BXW9 1451 aa26.49■■□□□ 1.83
DSP-203ENST00000506617 CEP164Q9UPV0 1460 aa26.47■■□□□ 1.83
DSP-203ENST00000506617 MRC2Q9UBG0 1479 aa26.42■■□□□ 1.82
DSP-203ENST00000506617 WDR62O43379 1518 aa26.36■■□□□ 1.81
DSP-203ENST00000506617 URB2Q14146 1524 aaKnown RBP26.24■■□□□ 1.79
DSP-203ENST00000506617 TOPBP1Q92547 1522 aa26.08■■□□□ 1.77
DSP-203ENST00000506617 DNMBPQ6XZF7 1577 aa26.07■■□□□ 1.76
DSP-203ENST00000506617 ABCC8Q09428 1581 aa26.03■■□□□ 1.76
DSP-203ENST00000506617 IFT140Q96RY7 1462 aa25.89■■□□□ 1.73
DSP-203ENST00000506617 CUX1P39880 1505 aa25.88■■□□□ 1.73
DSP-203ENST00000506617 POLA1P09884 1462 aaPredicted RBP25.85■■□□□ 1.73
DSP-203ENST00000506617 TARBP1Q13395 1621 aaKnown RBP25.81■■□□□ 1.72
DSP-203ENST00000506617 FGD5Q6ZNL6 1462 aa25.8■■□□□ 1.72
DSP-203ENST00000506617 ZNF608Q9ULD9 1512 aaPredicted RBP25.8■■□□□ 1.72
DSP-203ENST00000506617 EIF4G3O43432 1585 aaKnown RBP25.75■■□□□ 1.71
DSP-203ENST00000506617 RAD54L2Q9Y4B4 1467 aa25.73■■□□□ 1.71
DSP-203ENST00000506617 SOGA1O94964 1423 aa25.71■■□□□ 1.71
DSP-203ENST00000506617 BIVM-ERCC5R4GMW8 1640 aa25.7■■□□□ 1.7
DSP-203ENST00000506617 WRNQ14191 1432 aaPredicted RBP eCLIP25.69■■□□□ 1.7
DSP-203ENST00000506617 SYNJ1O43426 1573 aa25.69■■□□□ 1.7
DSP-203ENST00000506617 TOP2BQ02880 1626 aa25.67■■□□□ 1.7
DSP-203ENST00000506617 DNAJC5Q9H3Z4 198 aa25.67■■□□□ 1.7
DSP-203ENST00000506617 WDR97A6NE52 1622 aa25.66■■□□□ 1.7
DSP-203ENST00000506617 AQRO60306 1485 aaKnown RBP eCLIP25.62■■□□□ 1.69
DSP-203ENST00000506617 TDRD9Q8NDG6 1382 aaKnown RBP25.56■■□□□ 1.68
DSP-203ENST00000506617 ABCA10Q8WWZ4 1543 aa25.53■■□□□ 1.68
DSP-203ENST00000506617 PBRM1Q86U86 1689 aa25.48■■□□□ 1.67
DSP-203ENST00000506617 ABCA5Q8WWZ7 1642 aa25.48■■□□□ 1.67
DSP-203ENST00000506617 CHD1O14646 1710 aa25.46■■□□□ 1.67
DSP-203ENST00000506617 SNAPC4Q5SXM2 1469 aa25.43■■□□□ 1.66
DSP-203ENST00000506617 GRIN2BQ13224 1484 aa25.42■■□□□ 1.66
DSP-203ENST00000506617 GAPVD1Q14C86 1478 aa25.42■■□□□ 1.66
DSP-203ENST00000506617 MAGI1Q96QZ7 1491 aaPredicted RBP25.37■■□□□ 1.65
DSP-203ENST00000506617 OSCARQ8IYS5 282 aa25.37■■□□□ 1.65
DSP-203ENST00000506617 FBLN2P98095 1184 aa25.28■■□□□ 1.64
DSP-203ENST00000506617 SYNJ2O15056 1496 aa25.27■■□□□ 1.64
DSP-203ENST00000506617 ADAMTS12P58397 1594 aa25.24■■□□□ 1.63
DSP-203ENST00000506617 ERICH3Q5RHP9 1530 aa25.23■■□□□ 1.63
DSP-203ENST00000506617 CHMP7Q8WUX9 453 aaPredicted RBP25.2■■□□□ 1.62
DSP-203ENST00000506617 KIF27Q86VH2 1401 aa25.13■■□□□ 1.61
DSP-203ENST00000506617 FHAD1B1AJZ9 1412 aa25.12■■□□□ 1.61
DSP-203ENST00000506617 CLASP1Q7Z460 1538 aa25.12■■□□□ 1.61
DSP-203ENST00000506617 GRIN2AQ12879 1464 aa25.12■■□□□ 1.61
DSP-203ENST00000506617 RIMBP3CA6NJZ7 1639 aa25.1■■□□□ 1.61
DSP-203ENST00000506617 RIMBP3BA6NNM3 1639 aa25.1■■□□□ 1.61
DSP-203ENST00000506617 RIMBP3Q9UFD9 1639 aa25.1■■□□□ 1.61
DSP-203ENST00000506617 ARHGEF11O15085 1522 aa25.07■■□□□ 1.6
DSP-203ENST00000506617 CUL7Q14999 1698 aa25.04■■□□□ 1.6
DSP-203ENST00000506617 CEP170Q5SW79 1584 aa25.03■■□□□ 1.6
DSP-203ENST00000506617 TRIM41Q8WV44 630 aa25.02■■□□□ 1.6
DSP-203ENST00000506617 IGF1RP08069 1367 aa25.01■■□□□ 1.59
DSP-203ENST00000506617 NUP160Q12769 1436 aa25■■□□□ 1.59
DSP-203ENST00000506617 CHIC1Q5VXU3 224 aa24.96■■□□□ 1.59
DSP-203ENST00000506617 RUSC2Q8N2Y8 1516 aa24.95■■□□□ 1.58
DSP-203ENST00000506617 CARMIL1Q5VZK9 1371 aa24.87■■□□□ 1.57
DSP-203ENST00000506617 ARAP1Q96P48 1450 aa24.87■■□□□ 1.57
DSP-203ENST00000506617 SHROOM2Q13796 1616 aa24.86■■□□□ 1.57
DSP-203ENST00000506617 ERCC6L2Q5T890 1561 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms