RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 ADAMTS7Q9UKP4 1686 aa23.8■■□□□ 1.4
SMN1-204ENST00000506163 SLC52A2Q9HAB3 445 aa23.79■■□□□ 1.4
SMN1-204ENST00000506163 VIRMAQ69YN4 1812 aaKnown RBP23.79■■□□□ 1.4
SMN1-204ENST00000506163 MAP3K5Q99683 1374 aa23.79■■□□□ 1.4
SMN1-204ENST00000506163 GNAT3A8MTJ3 354 aa23.78■■□□□ 1.4
SMN1-204ENST00000506163 ITPK1Q13572 414 aa23.78■■□□□ 1.4
SMN1-204ENST00000506163 CASZ1Q86V15 1759 aa23.78■■□□□ 1.4
SMN1-204ENST00000506163 TAF1LQ8IZX4 1826 aa23.77■■□□□ 1.4
SMN1-204ENST00000506163 MRC1P22897 1456 aa23.77■■□□□ 1.4
SMN1-204ENST00000506163 LINC00116Q8NCU8 138 aa23.76■■□□□ 1.39
SMN1-204ENST00000506163 ATP6V1AP38606 617 aa23.75■■□□□ 1.39
SMN1-204ENST00000506163 SLC39A6Q13433 755 aa23.75■■□□□ 1.39
SMN1-204ENST00000506163 AMIGO3Q86WK7 504 aa23.75■■□□□ 1.39
SMN1-204ENST00000506163 RBM42Q9BTD8 480 aaKnown RBP23.75■■□□□ 1.39
SMN1-204ENST00000506163 PNPLA7Q6ZV29 1317 aa23.75■■□□□ 1.39
SMN1-204ENST00000506163 C5P01031 1676 aa23.74■■□□□ 1.39
SMN1-204ENST00000506163 TUBGCP6Q96RT7 1819 aa23.74■■□□□ 1.39
SMN1-204ENST00000506163 CCDC184Q52MB2 194 aa23.74■■□□□ 1.39
SMN1-204ENST00000506163 TFCP2L1Q9NZI6 479 aa23.74■■□□□ 1.39
SMN1-204ENST00000506163 PTCD1O75127 700 aaKnown RBP23.73■■□□□ 1.39
SMN1-204ENST00000506163 ZBTB7AO95365 584 aa23.73■■□□□ 1.39
SMN1-204ENST00000506163 SMIM5Q71RC9 77 aa23.73■■□□□ 1.39
SMN1-204ENST00000506163 CEMIPQ8WUJ3 1361 aa23.73■■□□□ 1.39
SMN1-204ENST00000506163 LRP5O75197 1615 aa23.71■■□□□ 1.39
SMN1-204ENST00000506163 DCTN1Q14203 1278 aa23.71■■□□□ 1.39
SMN1-204ENST00000506163 MCM10Q7L590 875 aa23.71■■□□□ 1.39
SMN1-204ENST00000506163 C4BP0C0L5 1744 aa23.7■■□□□ 1.38
SMN1-204ENST00000506163 COL23A1Q86Y22 540 aaPredicted RBP23.69■■□□□ 1.38
SMN1-204ENST00000506163 ADAMTS8Q9UP79 889 aa23.69■■□□□ 1.38
SMN1-204ENST00000506163 ATF5Q9Y2D1 282 aaPredicted RBP23.69■■□□□ 1.38
SMN1-204ENST00000506163 SPON1Q9HCB6 807 aa23.68■■□□□ 1.38
SMN1-204ENST00000506163 QSER1Q2KHR3 1735 aa23.68■■□□□ 1.38
SMN1-204ENST00000506163 PTGER2P43116 358 aa23.67■■□□□ 1.38
SMN1-204ENST00000506163 NFE2L2Q16236 605 aa23.67■■□□□ 1.38
SMN1-204ENST00000506163 SIPA1L3O60292 1781 aaPredicted RBP23.67■■□□□ 1.38
SMN1-204ENST00000506163 TEFQ10587 303 aa23.67■■□□□ 1.38
SMN1-204ENST00000506163 CCDC146Q8IYE0 955 aa23.67■■□□□ 1.38
SMN1-204ENST00000506163 DLG5Q8TDM6 1919 aa23.66■■□□□ 1.38
SMN1-204ENST00000506163 ZNF831Q5JPB2 1677 aa23.66■■□□□ 1.38
SMN1-204ENST00000506163 KCNQ3O43525 872 aa23.66■■□□□ 1.38
SMN1-204ENST00000506163 KCPQ6ZWJ8 1503 aa23.65■■□□□ 1.38
SMN1-204ENST00000506163 HTATSF1O43719 755 aaKnown RBP23.65■■□□□ 1.38
SMN1-204ENST00000506163 RTF1Q92541 710 aaKnown RBP23.65■■□□□ 1.38
SMN1-204ENST00000506163 AK7Q96M32 723 aa23.65■■□□□ 1.38
SMN1-204ENST00000506163 SGIP1Q9BQI5 828 aa23.65■■□□□ 1.38
SMN1-204ENST00000506163 MTFR1LQ9H019 292 aa23.65■■□□□ 1.38
SMN1-204ENST00000506163 PNNQ9H307 717 aaKnown RBP23.65■■□□□ 1.38
SMN1-204ENST00000506163 UBR3Q6ZT12 1888 aa23.64■■□□□ 1.37
SMN1-204ENST00000506163 MYH14Q7Z406 1995 aaKnown RBP23.64■■□□□ 1.37
SMN1-204ENST00000506163 NEFMP07197 916 aa23.63■■□□□ 1.37
SMN1-204ENST00000506163 WDR43Q15061 677 aaKnown RBP eCLIP23.63■■□□□ 1.37
SMN1-204ENST00000506163 DNAJC10Q8IXB1 793 aa23.63■■□□□ 1.37
SMN1-204ENST00000506163 THUMPD2Q9BTF0 503 aaKnown RBP23.63■■□□□ 1.37
SMN1-204ENST00000506163 MAPK8IP3Q9UPT6 1336 aa23.63■■□□□ 1.37
SMN1-204ENST00000506163 COL5A3P25940 1745 aaPredicted RBP23.62■■□□□ 1.37
SMN1-204ENST00000506163 TJP1Q07157 1748 aa23.62■■□□□ 1.37
SMN1-204ENST00000506163 ANP32CO43423 234 aa23.62■■□□□ 1.37
SMN1-204ENST00000506163 ZNF790Q6PG37 636 aa23.62■■□□□ 1.37
SMN1-204ENST00000506163 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.61■■□□□ 1.37
SMN1-204ENST00000506163 GNPATO15228 680 aa23.61■■□□□ 1.37
SMN1-204ENST00000506163 HMGB2P26583 209 aaKnown RBP23.61■■□□□ 1.37
SMN1-204ENST00000506163 TMPOP42166 694 aaKnown RBP23.61■■□□□ 1.37
SMN1-204ENST00000506163 RC3H1Q5TC82 1133 aaKnown RBP23.61■■□□□ 1.37
SMN1-204ENST00000506163 ZNF496Q96IT1 587 aaPredicted RBP23.61■■□□□ 1.37
SMN1-204ENST00000506163 UBR2Q8IWV8 1755 aa23.61■■□□□ 1.37
SMN1-204ENST00000506163 BTBD11A6QL63 1104 aa23.6■■□□□ 1.37
SMN1-204ENST00000506163 PHF14O94880 888 aa23.6■■□□□ 1.37
SMN1-204ENST00000506163 SLC16A10Q8TF71 515 aa23.6■■□□□ 1.37
SMN1-204ENST00000506163 RRP7AQ9Y3A4 280 aaKnown RBP23.6■■□□□ 1.37
SMN1-204ENST00000506163 CNTNAP4Q9C0A0 1308 aa23.6■■□□□ 1.37
SMN1-204ENST00000506163 MSH5O43196 834 aa23.59■■□□□ 1.37
SMN1-204ENST00000506163 CRKLP46109 303 aaKnown RBP23.59■■□□□ 1.37
SMN1-204ENST00000506163 INTS5Q6P9B9 1019 aaKnown RBP23.59■■□□□ 1.37
SMN1-204ENST00000506163 RUNDC1Q96C34 613 aa23.59■■□□□ 1.37
SMN1-204ENST00000506163 MIS18AQ9NYP9 233 aa23.59■■□□□ 1.37
SMN1-204ENST00000506163 RIPK4P57078 832 aa23.59■■□□□ 1.37
SMN1-204ENST00000506163 CICQ96RK0 1608 aaPredicted RBP23.58■■□□□ 1.37
SMN1-204ENST00000506163 CYP19A1P11511 503 aaPredicted RBP23.58■■□□□ 1.36
SMN1-204ENST00000506163 SSFA2P28290 1259 aa23.58■■□□□ 1.36
SMN1-204ENST00000506163 TTC5Q8N0Z6 440 aa23.58■■□□□ 1.36
SMN1-204ENST00000506163 FLAD1Q8NFF5 587 aa23.58■■□□□ 1.36
SMN1-204ENST00000506163 TAF7Q15545 349 aaPredicted RBP23.57■■□□□ 1.36
SMN1-204ENST00000506163 VSIG10Q8N0Z9 540 aa23.57■■□□□ 1.36
SMN1-204ENST00000506163 RPS6KA4O75676 772 aa23.56■■□□□ 1.36
SMN1-204ENST00000506163 MSL1Q68DK7 614 aa23.56■■□□□ 1.36
SMN1-204ENST00000506163 COL24A1Q17RW2 1714 aa23.56■■□□□ 1.36
SMN1-204ENST00000506163 PNISRQ8TF01 805 aaKnown RBP23.55■■□□□ 1.36
SMN1-204ENST00000506163 RTCBQ9Y3I0 505 aaKnown RBP23.55■■□□□ 1.36
SMN1-204ENST00000506163 HEG1Q9ULI3 1381 aa23.55■■□□□ 1.36
SMN1-204ENST00000506163 NEUROD2Q15784 382 aa23.54■■□□□ 1.36
SMN1-204ENST00000506163 ARHGEF1Q92888 912 aaKnown RBP23.54■■□□□ 1.36
SMN1-204ENST00000506163 TRIM35Q9UPQ4 493 aa23.54■■□□□ 1.36
SMN1-204ENST00000506163 PRAMEF22A3QJZ6 481 aa23.53■■□□□ 1.36
SMN1-204ENST00000506163 TRAPPC3LQ5T215 181 aa23.52■■□□□ 1.36
SMN1-204ENST00000506163 FMNL2Q96PY5 1086 aa23.52■■□□□ 1.36
SMN1-204ENST00000506163 MRS2Q9HD23 443 aa23.52■■□□□ 1.36
SMN1-204ENST00000506163 CCDC87Q9NVE4 849 aa23.52■■□□□ 1.36
SMN1-204ENST00000506163 PPP1R1BQ9UD71 204 aaPredicted RBP23.51■■□□□ 1.35
SMN1-204ENST00000506163 ZBTB1Q9Y2K1 713 aa23.5■■□□□ 1.35
SMN1-204ENST00000506163 USP16Q9Y5T5 823 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms