RNA–Protein interactions for RNA: ENST00000505543.5

WDR1-208, Transcript of WD repeat domain 1, humanhuman

TSL 4

Gene WDR1, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR1-208ENST00000505543 LGR6Q9HBX8 967 aa17.33■□□□□ 0.36
WDR1-208ENST00000505543 TMOD3Q9NYL9 352 aa17.33■□□□□ 0.36
WDR1-208ENST00000505543 TTC5Q8N0Z6 440 aa17.32■□□□□ 0.36
WDR1-208ENST00000505543 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.32■□□□□ 0.36
WDR1-208ENST00000505543 THUMPD2Q9BTF0 503 aaKnown RBP17.32■□□□□ 0.36
WDR1-208ENST00000505543 GLI3P10071 1580 aa17.32■□□□□ 0.36
WDR1-208ENST00000505543 SCN11AQ9UI33 1791 aa17.31■□□□□ 0.36
WDR1-208ENST00000505543 ALDH1L2Q3SY69 923 aa17.31■□□□□ 0.36
WDR1-208ENST00000505543 SEPT12Q8IYM1 358 aa17.31■□□□□ 0.36
WDR1-208ENST00000505543 RCAN3Q9UKA8 241 aa17.31■□□□□ 0.36
WDR1-208ENST00000505543 NFATC2IPQ8NCF5 419 aa17.3■□□□□ 0.36
WDR1-208ENST00000505543 SPINK5Q9NQ38 1064 aaPredicted RBP17.3■□□□□ 0.36
WDR1-208ENST00000505543 SENP3-EIF4A1A0A087X0R7 540 aa17.29■□□□□ 0.36
WDR1-208ENST00000505543 ZNF790Q6PG37 636 aa17.29■□□□□ 0.36
WDR1-208ENST00000505543 MARCH10Q8NA82 808 aaPredicted RBP17.29■□□□□ 0.36
WDR1-208ENST00000505543 SMARCC1Q92922 1105 aaPredicted RBP17.29■□□□□ 0.36
WDR1-208ENST00000505543 SHANK3Q9BYB0 1731 aa17.28■□□□□ 0.36
WDR1-208ENST00000505543 TWISTNBQ3B726 338 aaPredicted RBP17.28■□□□□ 0.36
WDR1-208ENST00000505543 FAM196AQ6ZSG2 479 aa17.28■□□□□ 0.36
WDR1-208ENST00000505543 TSR2Q969E8 191 aaKnown RBP17.28■□□□□ 0.36
WDR1-208ENST00000505543 FMNL2Q96PY5 1086 aa17.28■□□□□ 0.36
WDR1-208ENST00000505543 TEX13AQ9BXU3 409 aaPredicted RBP17.28■□□□□ 0.36
WDR1-208ENST00000505543 MS4A1P11836 297 aa17.27■□□□□ 0.36
WDR1-208ENST00000505543 BRPF1P55201 1214 aaPredicted RBP17.27■□□□□ 0.36
WDR1-208ENST00000505543 EXOSC9Q06265 439 aaKnown RBP17.27■□□□□ 0.36
WDR1-208ENST00000505543 VSIG10Q8N0Z9 540 aa17.27■□□□□ 0.36
WDR1-208ENST00000505543 KRT27Q7Z3Y8 459 aa17.26■□□□□ 0.35
WDR1-208ENST00000505543 IPO8O15397 1037 aaKnown RBP17.25■□□□□ 0.35
WDR1-208ENST00000505543 EIF4A1P60842 406 aaKnown RBP17.25■□□□□ 0.35
WDR1-208ENST00000505543 CCDC30Q5VVM6 783 aa17.25■□□□□ 0.35
WDR1-208ENST00000505543 KIF16BQ96L93 1317 aa17.24■□□□□ 0.35
WDR1-208ENST00000505543 SNRPA1P09661 255 aaKnown RBP17.24■□□□□ 0.35
WDR1-208ENST00000505543 STK31Q9BXU1 1019 aa17.24■□□□□ 0.35
WDR1-208ENST00000505543 SIPA1L3O60292 1781 aaPredicted RBP17.24■□□□□ 0.35
WDR1-208ENST00000505543 HEG1Q9ULI3 1381 aa17.24■□□□□ 0.35
WDR1-208ENST00000505543 VAMP4O75379 141 aa17.23■□□□□ 0.35
WDR1-208ENST00000505543 ERBB4Q15303 1308 aa17.22■□□□□ 0.35
WDR1-208ENST00000505543 NEFLP07196 543 aa17.22■□□□□ 0.35
WDR1-208ENST00000505543 PRIM1P49642 420 aaKnown RBP17.22■□□□□ 0.35
WDR1-208ENST00000505543 RARSP54136 660 aaKnown RBP17.22■□□□□ 0.35
WDR1-208ENST00000505543 PIGBQ92521 554 aa17.22■□□□□ 0.35
WDR1-208ENST00000505543 KDM3BQ7LBC6 1761 aa17.22■□□□□ 0.35
WDR1-208ENST00000505543 GIGYF1O75420 1035 aaPredicted RBP17.21■□□□□ 0.35
WDR1-208ENST00000505543 ARHGAP45Q92619 1136 aa17.21■□□□□ 0.35
WDR1-208ENST00000505543 SYTL4Q96C24 671 aaPredicted RBP17.21■□□□□ 0.35
WDR1-208ENST00000505543 MIS18AQ9NYP9 233 aa17.21■□□□□ 0.35
WDR1-208ENST00000505543 C8orf58Q8NAV2 365 aa17.2■□□□□ 0.34
WDR1-208ENST00000505543 BCL11BQ9C0K0 894 aaPredicted RBP17.2■□□□□ 0.34
WDR1-208ENST00000505543 RNF123Q5XPI4 1314 aa17.2■□□□□ 0.34
WDR1-208ENST00000505543 VIRMAQ69YN4 1812 aaKnown RBP17.19■□□□□ 0.34
WDR1-208ENST00000505543 ERICH6BQ5W0A0 696 aa17.19■□□□□ 0.34
WDR1-208ENST00000505543 SMC4Q9NTJ3 1288 aa17.19■□□□□ 0.34
WDR1-208ENST00000505543 RGS17Q9UGC6 210 aaPredicted RBP17.19■□□□□ 0.34
WDR1-208ENST00000505543 STARD3NLO95772 234 aa17.18■□□□□ 0.34
WDR1-208ENST00000505543 HDGFL1Q5TGJ6 251 aa17.18■□□□□ 0.34
WDR1-208ENST00000505543 DBF4Q9UBU7 674 aaPredicted RBP17.18■□□□□ 0.34
WDR1-208ENST00000505543 PTPRCP08575 1304 aa17.18■□□□□ 0.34
WDR1-208ENST00000505543 CANXP27824 592 aaKnown RBP17.17■□□□□ 0.34
WDR1-208ENST00000505543 ZNF496Q96IT1 587 aaPredicted RBP17.17■□□□□ 0.34
WDR1-208ENST00000505543 CHMP4BQ9H444 224 aaKnown RBP17.17■□□□□ 0.34
WDR1-208ENST00000505543 ATG3Q9NT62 314 aa17.17■□□□□ 0.34
WDR1-208ENST00000505543 AAMPQ13685 434 aa17.16■□□□□ 0.34
WDR1-208ENST00000505543 PDE3AQ14432 1141 aa17.16■□□□□ 0.34
WDR1-208ENST00000505543 TSPYL6Q8N831 410 aa17.16■□□□□ 0.34
WDR1-208ENST00000505543 HYPKQ9NX55 129 aa17.16■□□□□ 0.34
WDR1-208ENST00000505543 PAPPAQ13219 1627 aa17.16■□□□□ 0.34
WDR1-208ENST00000505543 RRP1P56182 461 aaKnown RBP17.15■□□□□ 0.34
WDR1-208ENST00000505543 SLC39A6Q13433 755 aa17.15■□□□□ 0.34
WDR1-208ENST00000505543 POTEAQ6S8J7 498 aa17.15■□□□□ 0.34
WDR1-208ENST00000505543 SSH1Q8WYL5 1049 aa17.15■□□□□ 0.34
WDR1-208ENST00000505543 SUPT16HQ9Y5B9 1047 aaKnown RBP17.15■□□□□ 0.34
WDR1-208ENST00000505543 DOT1LQ8TEK3 1739 aa17.15■□□□□ 0.34
WDR1-208ENST00000505543 TOGARAM1Q9Y4F4 1720 aa17.15■□□□□ 0.34
WDR1-208ENST00000505543 NHSQ6T4R5 1651 aa17.14■□□□□ 0.33
WDR1-208ENST00000505543 ELL2O00472 640 aaPredicted RBP17.14■□□□□ 0.33
WDR1-208ENST00000505543 ZKSCAN2Q63HK3 967 aa17.14■□□□□ 0.33
WDR1-208ENST00000505543 API5Q9BZZ5 524 aaKnown RBP17.14■□□□□ 0.33
WDR1-208ENST00000505543 ASAP1Q9ULH1 1129 aa17.14■□□□□ 0.33
WDR1-208ENST00000505543 ITGB4P16144 1822 aa17.13■□□□□ 0.33
WDR1-208ENST00000505543 ACSBG1Q96GR2 724 aa17.13■□□□□ 0.33
WDR1-208ENST00000505543 ZNF831Q5JPB2 1677 aa17.13■□□□□ 0.33
WDR1-208ENST00000505543 PALLDQ8WX93 1383 aa17.13■□□□□ 0.33
WDR1-208ENST00000505543 RGS12O14924 1447 aa17.13■□□□□ 0.33
WDR1-208ENST00000505543 UBR2Q8IWV8 1755 aa17.12■□□□□ 0.33
WDR1-208ENST00000505543 KCPQ6ZWJ8 1503 aa17.12■□□□□ 0.33
WDR1-208ENST00000505543 CACNA1FO60840 1977 aa17.12■□□□□ 0.33
WDR1-208ENST00000505543 KCNQ3O43525 872 aa17.12■□□□□ 0.33
WDR1-208ENST00000505543 PTCD1O75127 700 aaKnown RBP17.12■□□□□ 0.33
WDR1-208ENST00000505543 DDX58O95786 925 aaKnown RBP17.12■□□□□ 0.33
WDR1-208ENST00000505543 SLC4A2P04920 1241 aa17.12■□□□□ 0.33
WDR1-208ENST00000505543 SLC27A3Q5K4L6 730 aa17.12■□□□□ 0.33
WDR1-208ENST00000505543 NPM2Q86SE8 214 aaKnown RBP17.12■□□□□ 0.33
WDR1-208ENST00000505543 MRPL50Q8N5N7 158 aaKnown RBP17.12■□□□□ 0.33
WDR1-208ENST00000505543 DDX21Q9NR30 783 aaKnown RBP eCLIP17.12■□□□□ 0.33
WDR1-208ENST00000505543 LOC102724428A0A0B4J2F2 783 aa17.11■□□□□ 0.33
WDR1-208ENST00000505543 SIK1P57059 783 aa17.11■□□□□ 0.33
WDR1-208ENST00000505543 ATF7IPQ6VMQ6 1270 aa17.11■□□□□ 0.33
WDR1-208ENST00000505543 RBM42Q9BTD8 480 aaKnown RBP17.11■□□□□ 0.33
WDR1-208ENST00000505543 CCDC125Q86Z20 511 aa17.1■□□□□ 0.33
WDR1-208ENST00000505543 FTSJ3Q8IY81 847 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms