RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 CLSTN1O94985 981 aa20.31■□□□□ 0.84
HMGXB3-201ENST00000502717 STK3Q13188 491 aa20.31■□□□□ 0.84
HMGXB3-201ENST00000502717 IL1RAPL2Q9NP60 686 aa20.3■□□□□ 0.84
HMGXB3-201ENST00000502717 PIP4K2BP78356 416 aa20.3■□□□□ 0.84
HMGXB3-201ENST00000502717 DDX19AQ9NUU7 478 aaKnown RBP20.3■□□□□ 0.84
HMGXB3-201ENST00000502717 KDM5BQ9UGL1 1544 aa20.3■□□□□ 0.84
HMGXB3-201ENST00000502717 STX6O43752 255 aa20.3■□□□□ 0.84
HMGXB3-201ENST00000502717 TNNQ9UQP3 1299 aa20.3■□□□□ 0.84
HMGXB3-201ENST00000502717 ZNF445P59923 1031 aa20.29■□□□□ 0.84
HMGXB3-201ENST00000502717 IDI1Q13907 227 aa20.29■□□□□ 0.84
HMGXB3-201ENST00000502717 JMYQ8N9B5 988 aa20.29■□□□□ 0.84
HMGXB3-201ENST00000502717 SPINK5Q9NQ38 1064 aaPredicted RBP20.29■□□□□ 0.84
HMGXB3-201ENST00000502717 ZMYM3Q14202 1370 aa20.29■□□□□ 0.84
HMGXB3-201ENST00000502717 ZNF830Q96NB3 372 aaPredicted RBP20.29■□□□□ 0.84
HMGXB3-201ENST00000502717 KRT32Q14532 448 aa20.28■□□□□ 0.84
HMGXB3-201ENST00000502717 FERMT3Q86UX7 667 aa20.28■□□□□ 0.84
HMGXB3-201ENST00000502717 SMTNL1A8MU46 457 aa20.28■□□□□ 0.84
HMGXB3-201ENST00000502717 CAVIN2O95810 425 aa20.28■□□□□ 0.84
HMGXB3-201ENST00000502717 SFPQP23246 707 aaKnown RBP eCLIP20.28■□□□□ 0.84
HMGXB3-201ENST00000502717 PCMTD1Q96MG8 357 aaPredicted RBP20.28■□□□□ 0.84
HMGXB3-201ENST00000502717 H0YHG0 523 aa20.27■□□□□ 0.84
HMGXB3-201ENST00000502717 RAB11FIP3O75154 756 aa20.27■□□□□ 0.84
HMGXB3-201ENST00000502717 ESCO1Q5FWF5 840 aa20.27■□□□□ 0.84
HMGXB3-201ENST00000502717 SMARCE1Q969G3 411 aa20.27■□□□□ 0.84
HMGXB3-201ENST00000502717 ANO10Q9NW15 660 aa20.27■□□□□ 0.84
HMGXB3-201ENST00000502717 COL17A1Q9UMD9 1497 aaPredicted RBP20.27■□□□□ 0.84
HMGXB3-201ENST00000502717 HDGFL1Q5TGJ6 251 aa20.27■□□□□ 0.84
HMGXB3-201ENST00000502717 NFXL1Q6ZNB6 911 aa20.27■□□□□ 0.84
HMGXB3-201ENST00000502717 FSD2A1L4K1 749 aa20.27■□□□□ 0.84
HMGXB3-201ENST00000502717 SRGAP3O43295 1099 aa20.27■□□□□ 0.84
HMGXB3-201ENST00000502717 ZBTB40Q9NUA8 1239 aa20.27■□□□□ 0.84
HMGXB3-201ENST00000502717 DNMT1P26358 1616 aaKnown RBP20.27■□□□□ 0.84
HMGXB3-201ENST00000502717 NUTM2BA6NNL0 878 aaPredicted RBP20.27■□□□□ 0.83
HMGXB3-201ENST00000502717 NUTM2EB1AL46 878 aaPredicted RBP20.27■□□□□ 0.83
HMGXB3-201ENST00000502717 SDSP20132 328 aa20.27■□□□□ 0.83
HMGXB3-201ENST00000502717 FILIP1LQ4L180 1135 aa20.27■□□□□ 0.83
HMGXB3-201ENST00000502717 NUTM2AQ8IVF1 878 aaPredicted RBP20.27■□□□□ 0.83
HMGXB3-201ENST00000502717 KRT222Q8N1A0 295 aa20.27■□□□□ 0.83
HMGXB3-201ENST00000502717 C14orf93Q9H972 538 aaKnown RBP20.27■□□□□ 0.83
HMGXB3-201ENST00000502717 CCDC47Q96A33 483 aaKnown RBP20.26■□□□□ 0.83
HMGXB3-201ENST00000502717 CCDC61Q9Y6R9 512 aa20.26■□□□□ 0.83
HMGXB3-201ENST00000502717 CTAGE5O15320 804 aa20.26■□□□□ 0.83
HMGXB3-201ENST00000502717 APPP05067 770 aa20.26■□□□□ 0.83
HMGXB3-201ENST00000502717 RBSNQ9H1K0 784 aa20.26■□□□□ 0.83
HMGXB3-201ENST00000502717 ANAPC15P60006 121 aa20.26■□□□□ 0.83
HMGXB3-201ENST00000502717 NOS1P29475 1434 aa20.26■□□□□ 0.83
HMGXB3-201ENST00000502717 ASXL2Q76L83 1435 aa20.26■□□□□ 0.83
HMGXB3-201ENST00000502717 BMS1Q14692 1282 aaKnown RBP20.25■□□□□ 0.83
HMGXB3-201ENST00000502717 RIC3Q7Z5B4 369 aa20.25■□□□□ 0.83
HMGXB3-201ENST00000502717 KIF1BPQ96EK5 621 aa20.25■□□□□ 0.83
HMGXB3-201ENST00000502717 TTC12Q9H892 705 aaPredicted RBP20.25■□□□□ 0.83
HMGXB3-201ENST00000502717 GLRX3O76003 335 aaKnown RBP20.25■□□□□ 0.83
HMGXB3-201ENST00000502717 TIGD1Q96MW7 591 aa20.25■□□□□ 0.83
HMGXB3-201ENST00000502717 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.25■□□□□ 0.83
HMGXB3-201ENST00000502717 PTPRCP08575 1304 aa20.25■□□□□ 0.83
HMGXB3-201ENST00000502717 ABTB2Q8N961 1025 aa20.25■□□□□ 0.83
HMGXB3-201ENST00000502717 PZPP20742 1482 aa20.25■□□□□ 0.83
HMGXB3-201ENST00000502717 USP48Q86UV5 1035 aa20.24■□□□□ 0.83
HMGXB3-201ENST00000502717 NUTM1Q86Y26 1132 aa20.24■□□□□ 0.83
HMGXB3-201ENST00000502717 WDR7Q9Y4E6 1490 aa20.24■□□□□ 0.83
HMGXB3-201ENST00000502717 GSDMDP57764 484 aa20.24■□□□□ 0.83
HMGXB3-201ENST00000502717 CKAP2LQ8IYA6 745 aa20.24■□□□□ 0.83
HMGXB3-201ENST00000502717 ZSCAN22P10073 491 aaPredicted RBP20.24■□□□□ 0.83
HMGXB3-201ENST00000502717 CEP135Q66GS9 1140 aa20.24■□□□□ 0.83
HMGXB3-201ENST00000502717 NEUROD6Q96NK8 337 aa20.24■□□□□ 0.83
HMGXB3-201ENST00000502717 NUTM2GQ5VZR2 741 aa20.23■□□□□ 0.83
HMGXB3-201ENST00000502717 PPP1R9BQ96SB3 815 aa20.23■□□□□ 0.83
HMGXB3-201ENST00000502717 FEZ1Q99689 392 aa20.23■□□□□ 0.83
HMGXB3-201ENST00000502717 NOL10Q9BSC4 688 aaKnown RBP20.23■□□□□ 0.83
HMGXB3-201ENST00000502717 EIF2AK4Q9P2K8 1649 aaKnown RBP20.23■□□□□ 0.83
HMGXB3-201ENST00000502717 CDR1P51861 262 aa20.23■□□□□ 0.83
HMGXB3-201ENST00000502717 FAM177A1Q8N128 213 aaPredicted RBP20.23■□□□□ 0.83
HMGXB3-201ENST00000502717 CAGE1Q8TC20 777 aa20.23■□□□□ 0.83
HMGXB3-201ENST00000502717 DACH1Q9UI36 760 aa20.23■□□□□ 0.83
HMGXB3-201ENST00000502717 TRAPPC8Q9Y2L5 1435 aa20.22■□□□□ 0.83
HMGXB3-201ENST00000502717 CCDC171Q6TFL3 1326 aa20.22■□□□□ 0.83
HMGXB3-201ENST00000502717 NPC1L1Q9UHC9 1359 aa20.22■□□□□ 0.83
HMGXB3-201ENST00000502717 RDXP35241 583 aaKnown RBP20.22■□□□□ 0.83
HMGXB3-201ENST00000502717 ZNF165P49910 485 aa20.22■□□□□ 0.83
HMGXB3-201ENST00000502717 SLC26A8Q96RN1 970 aa20.22■□□□□ 0.83
HMGXB3-201ENST00000502717 ZSCAN12O43309 604 aa20.22■□□□□ 0.83
HMGXB3-201ENST00000502717 GIMAP6Q6P9H5 292 aa20.22■□□□□ 0.83
HMGXB3-201ENST00000502717 PRPF40BQ6NWY9 871 aaKnown RBP20.22■□□□□ 0.83
HMGXB3-201ENST00000502717 KIF20AO95235 890 aa20.22■□□□□ 0.83
HMGXB3-201ENST00000502717 WASHC4Q2M389 1173 aa20.21■□□□□ 0.83
HMGXB3-201ENST00000502717 PPFIBP1Q86W92 1011 aa20.21■□□□□ 0.83
HMGXB3-201ENST00000502717 FAM200AQ8TCP9 573 aa20.21■□□□□ 0.83
HMGXB3-201ENST00000502717 NUDT16Q96DE0 195 aaKnown RBP20.21■□□□□ 0.83
HMGXB3-201ENST00000502717 TARBP1Q13395 1621 aaKnown RBP20.21■□□□□ 0.83
HMGXB3-201ENST00000502717 ADGRL2O95490 1459 aa20.21■□□□□ 0.83
HMGXB3-201ENST00000502717 TTLL5Q6EMB2 1281 aa20.21■□□□□ 0.83
HMGXB3-201ENST00000502717 DNAJC2Q99543 621 aaKnown RBP20.21■□□□□ 0.83
HMGXB3-201ENST00000502717 DEF6Q9H4E7 631 aa20.21■□□□□ 0.83
HMGXB3-201ENST00000502717 GJB2P29033 226 aa20.2■□□□□ 0.82
HMGXB3-201ENST00000502717 AXDND1Q5T1B0 1012 aaPredicted RBP20.2■□□□□ 0.82
HMGXB3-201ENST00000502717 INTS4Q96HW7 963 aaKnown RBP20.2■□□□□ 0.82
HMGXB3-201ENST00000502717 AACSQ86V21 672 aa20.2■□□□□ 0.82
HMGXB3-201ENST00000502717 MYRIPQ8NFW9 859 aa20.2■□□□□ 0.82
HMGXB3-201ENST00000502717 A2MP01023 1474 aa20.19■□□□□ 0.82
HMGXB3-201ENST00000502717 USP8P40818 1118 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms