RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 RRS1Q15050 365 aaKnown RBP15.46■□□□□ 0.07
UBE2D3-211ENST00000502404 TIMELESSQ9UNS1 1208 aa15.46■□□□□ 0.07
UBE2D3-211ENST00000502404 STK25O00506 426 aa15.45■□□□□ 0.06
UBE2D3-211ENST00000502404 NBPF6Q5VWK0 638 aa15.45■□□□□ 0.06
UBE2D3-211ENST00000502404 NBPF4Q96M43 638 aa15.45■□□□□ 0.06
UBE2D3-211ENST00000502404 KIF24Q5T7B8 1368 aa15.45■□□□□ 0.06
UBE2D3-211ENST00000502404 MAP3K5Q99683 1374 aa15.45■□□□□ 0.06
UBE2D3-211ENST00000502404 PSEN1P49768 467 aa15.44■□□□□ 0.06
UBE2D3-211ENST00000502404 CCNL1Q9UK58 526 aaPredicted RBP15.44■□□□□ 0.06
UBE2D3-211ENST00000502404 MYOM1P52179 1685 aa15.44■□□□□ 0.06
UBE2D3-211ENST00000502404 GPR162Q16538 588 aa15.43■□□□□ 0.06
UBE2D3-211ENST00000502404 INSRP06213 1382 aa15.43■□□□□ 0.06
UBE2D3-211ENST00000502404 FLT4P35916 1363 aa15.42■□□□□ 0.06
UBE2D3-211ENST00000502404 PAPPAQ13219 1627 aa15.42■□□□□ 0.06
UBE2D3-211ENST00000502404 PNPLA7Q6ZV29 1317 aa15.42■□□□□ 0.06
UBE2D3-211ENST00000502404 PCDH11XQ9BZA7 1347 aa15.42■□□□□ 0.06
UBE2D3-211ENST00000502404 PCDH11YQ9BZA8 1340 aa15.42■□□□□ 0.06
UBE2D3-211ENST00000502404 HSP90AB2PQ58FF8 381 aa15.41■□□□□ 0.06
UBE2D3-211ENST00000502404 USHBP1Q8N6Y0 703 aa15.41■□□□□ 0.06
UBE2D3-211ENST00000502404 FLAD1Q8NFF5 587 aa15.41■□□□□ 0.06
UBE2D3-211ENST00000502404 MEGF6O75095 1541 aa15.4■□□□□ 0.06
UBE2D3-211ENST00000502404 KCNQ4P56696 695 aa15.4■□□□□ 0.06
UBE2D3-211ENST00000502404 ZNF784Q8NCA9 323 aaPredicted RBP15.39■□□□□ 0.05
UBE2D3-211ENST00000502404 SMARCC1Q92922 1105 aaPredicted RBP15.39■□□□□ 0.05
UBE2D3-211ENST00000502404 STK24Q9Y6E0 443 aa15.39■□□□□ 0.05
UBE2D3-211ENST00000502404 PPM1GO15355 546 aaPredicted RBP15.38■□□□□ 0.05
UBE2D3-211ENST00000502404 SPG7Q9UQ90 795 aa15.38■□□□□ 0.05
UBE2D3-211ENST00000502404 NSD2O96028 1365 aa15.37■□□□□ 0.05
UBE2D3-211ENST00000502404 MPRIPQ6WCQ1 1025 aa15.37■□□□□ 0.05
UBE2D3-211ENST00000502404 CARD14Q9BXL6 1004 aa15.37■□□□□ 0.05
UBE2D3-211ENST00000502404 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.37■□□□□ 0.05
UBE2D3-211ENST00000502404 CLSPNQ9HAW4 1339 aa15.37■□□□□ 0.05
UBE2D3-211ENST00000502404 PELP1Q8IZL8 1130 aaKnown RBP15.36■□□□□ 0.05
UBE2D3-211ENST00000502404 NSD3Q9BZ95 1437 aa15.35■□□□□ 0.05
UBE2D3-211ENST00000502404 QSER1Q2KHR3 1735 aa15.35■□□□□ 0.05
UBE2D3-211ENST00000502404 GALR2O43603 387 aaPredicted RBP15.35■□□□□ 0.05
UBE2D3-211ENST00000502404 GRIN3BO60391 1043 aa15.35■□□□□ 0.05
UBE2D3-211ENST00000502404 PLCB2Q00722 1185 aa15.35■□□□□ 0.05
UBE2D3-211ENST00000502404 DOT1LQ8TEK3 1739 aa15.34■□□□□ 0.05
UBE2D3-211ENST00000502404 CYP27B1O15528 508 aa15.34■□□□□ 0.05
UBE2D3-211ENST00000502404 COL23A1Q86Y22 540 aaPredicted RBP15.34■□□□□ 0.05
UBE2D3-211ENST00000502404 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.34■□□□□ 0.05
UBE2D3-211ENST00000502404 TRPC6Q9Y210 931 aa15.34■□□□□ 0.05
UBE2D3-211ENST00000502404 EMILIN1Q9Y6C2 1016 aa15.34■□□□□ 0.05
UBE2D3-211ENST00000502404 WASHC2AQ641Q2 1341 aa15.34■□□□□ 0.05
UBE2D3-211ENST00000502404 PALLDQ8WX93 1383 aa15.34■□□□□ 0.05
UBE2D3-211ENST00000502404 RGPD2P0DJD1 1756 aa15.34■□□□□ 0.05
UBE2D3-211ENST00000502404 AK7Q96M32 723 aa15.33■□□□□ 0.04
UBE2D3-211ENST00000502404 LY75O60449 1722 aa15.33■□□□□ 0.04
UBE2D3-211ENST00000502404 NKX1-1Q15270 411 aaPredicted RBP15.32■□□□□ 0.04
UBE2D3-211ENST00000502404 POLR3GLQ9BT43 218 aa15.32■□□□□ 0.04
UBE2D3-211ENST00000502404 KIF20BQ96Q89 1820 aa15.31■□□□□ 0.04
UBE2D3-211ENST00000502404 CHD4Q14839 1912 aa15.31■□□□□ 0.04
UBE2D3-211ENST00000502404 TIE1P35590 1138 aa15.31■□□□□ 0.04
UBE2D3-211ENST00000502404 IFNL2Q8IZJ0 200 aa15.3■□□□□ 0.04
UBE2D3-211ENST00000502404 SHANK3Q9BYB0 1731 aa15.3■□□□□ 0.04
UBE2D3-211ENST00000502404 PCGF6Q9BYE7 350 aa15.3■□□□□ 0.04
UBE2D3-211ENST00000502404 TMOD3Q9NYL9 352 aa15.3■□□□□ 0.04
UBE2D3-211ENST00000502404 CD2APQ9Y5K6 639 aa15.3■□□□□ 0.04
UBE2D3-211ENST00000502404 MSL1Q68DK7 614 aa15.29■□□□□ 0.04
UBE2D3-211ENST00000502404 NLGN2Q8NFZ4 835 aa15.29■□□□□ 0.04
UBE2D3-211ENST00000502404 PIGBQ92521 554 aa15.29■□□□□ 0.04
UBE2D3-211ENST00000502404 EYA1Q99502 592 aa15.29■□□□□ 0.04
UBE2D3-211ENST00000502404 POLKQ9UBT6 870 aa15.29■□□□□ 0.04
UBE2D3-211ENST00000502404 GABBR2O75899 941 aa15.28■□□□□ 0.04
UBE2D3-211ENST00000502404 EIF4G2P78344 907 aaKnown RBP eCLIP15.28■□□□□ 0.04
UBE2D3-211ENST00000502404 COL24A1Q17RW2 1714 aa15.27■□□□□ 0.04
UBE2D3-211ENST00000502404 LOC102724428A0A0B4J2F2 783 aa15.27■□□□□ 0.04
UBE2D3-211ENST00000502404 SIK1P57059 783 aa15.27■□□□□ 0.04
UBE2D3-211ENST00000502404 C1QTNF8P60827 252 aa15.27■□□□□ 0.04
UBE2D3-211ENST00000502404 TMEM106CQ9BVX2 250 aa15.27■□□□□ 0.04
UBE2D3-211ENST00000502404 NCAPD2Q15021 1401 aa15.26■□□□□ 0.03
UBE2D3-211ENST00000502404 PLEKHG2Q9H7P9 1386 aa15.26■□□□□ 0.03
UBE2D3-211ENST00000502404 HSP90AB1P08238 724 aaKnown RBP15.26■□□□□ 0.03
UBE2D3-211ENST00000502404 SSFA2P28290 1259 aa15.26■□□□□ 0.03
UBE2D3-211ENST00000502404 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.25■□□□□ 0.03
UBE2D3-211ENST00000502404 GIGYF1O75420 1035 aaPredicted RBP15.25■□□□□ 0.03
UBE2D3-211ENST00000502404 PHKG2P15735 406 aa15.25■□□□□ 0.03
UBE2D3-211ENST00000502404 TNNT2P45379 298 aaPredicted RBP15.25■□□□□ 0.03
UBE2D3-211ENST00000502404 TUBGCP6Q96RT7 1819 aa15.24■□□□□ 0.03
UBE2D3-211ENST00000502404 TTLL13PA6NNM8 815 aa15.24■□□□□ 0.03
UBE2D3-211ENST00000502404 PHF14O94880 888 aa15.24■□□□□ 0.03
UBE2D3-211ENST00000502404 ATP6V1AP38606 617 aa15.24■□□□□ 0.03
UBE2D3-211ENST00000502404 EIF4A2Q14240 407 aaKnown RBP15.24■□□□□ 0.03
UBE2D3-211ENST00000502404 PLEKHO1Q53GL0 409 aaPredicted RBP15.24■□□□□ 0.03
UBE2D3-211ENST00000502404 BMP2KQ9NSY1 1161 aaPredicted RBP15.24■□□□□ 0.03
UBE2D3-211ENST00000502404 C5P01031 1676 aa15.23■□□□□ 0.03
UBE2D3-211ENST00000502404 SENP3-EIF4A1A0A087X0R7 540 aa15.23■□□□□ 0.03
UBE2D3-211ENST00000502404 ERVV-2B6SEH9 535 aa15.23■□□□□ 0.03
UBE2D3-211ENST00000502404 YBX3P16989 372 aaKnown RBP eCLIP15.23■□□□□ 0.034e-8■□□□□ 8.6
UBE2D3-211ENST00000502404 SPRYD3Q8NCJ5 442 aa15.23■□□□□ 0.03
UBE2D3-211ENST00000502404 ASAP1Q9ULH1 1129 aa15.23■□□□□ 0.03
UBE2D3-211ENST00000502404 AMOTQ4VCS5 1084 aa15.22■□□□□ 0.03
UBE2D3-211ENST00000502404 PAXIP1Q6ZW49 1069 aaPredicted RBP15.22■□□□□ 0.03
UBE2D3-211ENST00000502404 DCAF5Q96JK2 942 aa15.22■□□□□ 0.03
UBE2D3-211ENST00000502404 PANK3Q9H999 370 aa15.22■□□□□ 0.03
UBE2D3-211ENST00000502404 PKD1L3Q7Z443 1732 aa15.22■□□□□ 0.03
UBE2D3-211ENST00000502404 GNPATO15228 680 aa15.21■□□□□ 0.03
UBE2D3-211ENST00000502404 MORC1Q86VD1 984 aa15.21■□□□□ 0.03
UBE2D3-211ENST00000502404 LINC00116Q8NCU8 138 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms