RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 DHX57Q6P158 1386 aaKnown RBP6.95□□□□□ -1.3
CMSS1-209ENST00000497345 NAIPQ13075 1403 aa6.95□□□□□ -1.3
CMSS1-209ENST00000497345 CD109Q6YHK3 1445 aa6.95□□□□□ -1.3
CMSS1-209ENST00000497345 KDM6BO15054 1643 aa6.95□□□□□ -1.3
CMSS1-209ENST00000497345 SOBPA7XYQ1 873 aa6.95□□□□□ -1.3
CMSS1-209ENST00000497345 H3BM21 787 aa6.95□□□□□ -1.3
CMSS1-209ENST00000497345 UPP2O95045 317 aa6.95□□□□□ -1.3
CMSS1-209ENST00000497345 C6orf118Q5T5N4 469 aa6.95□□□□□ -1.3
CMSS1-209ENST00000497345 CCDC116Q8IYX3 515 aa6.95□□□□□ -1.3
CMSS1-209ENST00000497345 IRF7Q92985 503 aa6.95□□□□□ -1.3
CMSS1-209ENST00000497345 HFM1A2PYH4 1435 aa6.94□□□□□ -1.3
CMSS1-209ENST00000497345 C9orf84Q5VXU9 1444 aa6.94□□□□□ -1.3
CMSS1-209ENST00000497345 AKNAQ7Z591 1439 aa6.94□□□□□ -1.3
CMSS1-209ENST00000497345 FANCAO15360 1455 aa6.94□□□□□ -1.3
CMSS1-209ENST00000497345 BMP2P12643 396 aa6.94□□□□□ -1.3
CMSS1-209ENST00000497345 ZBTB33Q86T24 672 aa6.94□□□□□ -1.3
CMSS1-209ENST00000497345 MEIOBQ8N635 442 aa6.94□□□□□ -1.3
CMSS1-209ENST00000497345 SIN3AQ96ST3 1273 aa6.94□□□□□ -1.3
CMSS1-209ENST00000497345 STK17AQ9UEE5 414 aa6.94□□□□□ -1.3
CMSS1-209ENST00000497345 ARHGEF12Q9NZN5 1544 aa6.94□□□□□ -1.3
CMSS1-209ENST00000497345 ZC3H4Q9UPT8 1303 aaKnown RBP6.94□□□□□ -1.3
CMSS1-209ENST00000497345 TSPOAP1O95153 1857 aa6.94□□□□□ -1.3
CMSS1-209ENST00000497345 ABCA9Q8IUA7 1624 aa6.94□□□□□ -1.3
CMSS1-209ENST00000497345 ANKRD30AQ9BXX3 1397 aa6.94□□□□□ -1.3
CMSS1-209ENST00000497345 TRAPPC8Q9Y2L5 1435 aa6.93□□□□□ -1.3
CMSS1-209ENST00000497345 GMPRP36959 345 aa6.93□□□□□ -1.3
CMSS1-209ENST00000497345 PTK2Q05397 1052 aa6.93□□□□□ -1.3
CMSS1-209ENST00000497345 LINC00528Q8N1L1 170 aa6.93□□□□□ -1.3
CMSS1-209ENST00000497345 CDV3Q9UKY7 258 aaKnown RBP6.93□□□□□ -1.3
CMSS1-209ENST00000497345 CROCC2H7BZ55 1655 aa6.93□□□□□ -1.3
CMSS1-209ENST00000497345 SCAPERQ9BY12 1400 aa6.93□□□□□ -1.3
CMSS1-209ENST00000497345 CCDC141Q6ZP82 1450 aa6.92□□□□□ -1.3
CMSS1-209ENST00000497345 MBD5Q9P267 1494 aa6.92□□□□□ -1.3
CMSS1-209ENST00000497345 MAN1A2O60476 641 aa6.92□□□□□ -1.3
CMSS1-209ENST00000497345 PPP1R26Q5T8A7 1209 aaPredicted RBP6.92□□□□□ -1.3
CMSS1-209ENST00000497345 EPS8L1Q8TE68 723 aa6.92□□□□□ -1.3
CMSS1-209ENST00000497345 KCTD15Q96SI1 283 aaPredicted RBP6.92□□□□□ -1.3
CMSS1-209ENST00000497345 TSEN34Q9BSV6 310 aaKnown RBP6.92□□□□□ -1.3
CMSS1-209ENST00000497345 PGPEP1Q9NXJ5 209 aa6.92□□□□□ -1.3
CMSS1-209ENST00000497345 GPSM3Q9Y4H4 160 aa6.92□□□□□ -1.3
CMSS1-209ENST00000497345 GCC2Q8IWJ2 1684 aa6.92□□□□□ -1.3
CMSS1-209ENST00000497345 ADGBQ8N7X0 1667 aa6.92□□□□□ -1.3
CMSS1-209ENST00000497345 SPAG9O60271 1321 aaKnown RBP6.92□□□□□ -1.3
CMSS1-209ENST00000497345 ADGRL1O94910 1474 aa6.92□□□□□ -1.3
CMSS1-209ENST00000497345 PLEKHH2Q8IVE3 1493 aa6.92□□□□□ -1.3
CMSS1-209ENST00000497345 RAPGEF3O95398 923 aa6.91□□□□□ -1.3
CMSS1-209ENST00000497345 RFC5P40937 340 aa6.91□□□□□ -1.3
CMSS1-209ENST00000497345 SLC10A4Q96EP9 437 aa6.91□□□□□ -1.3
CMSS1-209ENST00000497345 OCSTAMPQ9BR26 566 aa6.91□□□□□ -1.3
CMSS1-209ENST00000497345 GOPCQ9HD26 462 aa6.91□□□□□ -1.3
CMSS1-209ENST00000497345 ERBB4Q15303 1308 aa6.91□□□□□ -1.3
CMSS1-209ENST00000497345 ROCK1Q13464 1354 aa6.91□□□□□ -1.3
CMSS1-209ENST00000497345 KIF15Q9NS87 1388 aa6.91□□□□□ -1.3
CMSS1-209ENST00000497345 NCOA1Q15788 1441 aa6.91□□□□□ -1.3
CMSS1-209ENST00000497345 ARHGEF5Q12774 1597 aa6.91□□□□□ -1.3
CMSS1-209ENST00000497345 USP17L8P0C7I0 530 aa6.9□□□□□ -1.3
CMSS1-209ENST00000497345 PNMA1Q8ND90 353 aa6.9□□□□□ -1.3
CMSS1-209ENST00000497345 MPHOSPH9Q99550 1183 aa6.9□□□□□ -1.3
CMSS1-209ENST00000497345 HMX1Q9NP08 348 aaPredicted RBP6.9□□□□□ -1.3
CMSS1-209ENST00000497345 SOS2Q07890 1332 aaPredicted RBP6.9□□□□□ -1.3
CMSS1-209ENST00000497345 MAPKBP1O60336 1514 aa6.9□□□□□ -1.31
CMSS1-209ENST00000497345 ABCC1P33527 1531 aa6.9□□□□□ -1.31
CMSS1-209ENST00000497345 DHX9Q08211 1270 aaKnown RBP6.89□□□□□ -1.31
CMSS1-209ENST00000497345 CBLBQ13191 982 aa6.89□□□□□ -1.31
CMSS1-209ENST00000497345 Q6ZVU0 165 aa6.89□□□□□ -1.31
CMSS1-209ENST00000497345 ADAM32Q8TC27 787 aa6.89□□□□□ -1.31
CMSS1-209ENST00000497345 PCMTD1Q96MG8 357 aaPredicted RBP6.89□□□□□ -1.31
CMSS1-209ENST00000497345 ANKRD50Q9ULJ7 1429 aa6.89□□□□□ -1.31
CMSS1-209ENST00000497345 KIAA1107Q9UPP5 1409 aa6.89□□□□□ -1.31
CMSS1-209ENST00000497345 DIP2BQ9P265 1576 aa6.88□□□□□ -1.31
CMSS1-209ENST00000497345 SHANK2Q9UPX8 1470 aa6.88□□□□□ -1.31
CMSS1-209ENST00000497345 NUP155O75694 1391 aa6.88□□□□□ -1.31
CMSS1-209ENST00000497345 NEUROD2Q15784 382 aa6.88□□□□□ -1.31
CMSS1-209ENST00000497345 IL27Q8NEV9 243 aa6.88□□□□□ -1.31
CMSS1-209ENST00000497345 DNMT3LQ9UJW3 386 aa6.88□□□□□ -1.31
CMSS1-209ENST00000497345 ADGRL2O95490 1459 aa6.87□□□□□ -1.31
CMSS1-209ENST00000497345 PPFIA3O75145 1194 aa6.87□□□□□ -1.31
CMSS1-209ENST00000497345 LORP23490 312 aaPredicted RBP6.87□□□□□ -1.31
CMSS1-209ENST00000497345 TMEM259Q4ZIN3 620 aa6.87□□□□□ -1.31
CMSS1-209ENST00000497345 INTS6LQ5JSJ4 861 aaKnown RBP6.87□□□□□ -1.31
CMSS1-209ENST00000497345 ZSCAN1Q8NBB4 408 aa6.87□□□□□ -1.31
CMSS1-209ENST00000497345 MAP3K4Q9Y6R4 1608 aa6.87□□□□□ -1.31
CMSS1-209ENST00000497345 ARAP3Q8WWN8 1544 aa6.86□□□□□ -1.31
CMSS1-209ENST00000497345 TTLL8A6PVC2 850 aa6.86□□□□□ -1.31
CMSS1-209ENST00000497345 KIF3BO15066 747 aa6.86□□□□□ -1.31
CMSS1-209ENST00000497345 VSIG8P0DPA2 414 aa6.86□□□□□ -1.31
CMSS1-209ENST00000497345 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.86□□□□□ -1.31
CMSS1-209ENST00000497345 DZIP3Q86Y13 1208 aaKnown RBP6.86□□□□□ -1.31
CMSS1-209ENST00000497345 GLI2P10070 1586 aa6.86□□□□□ -1.31
CMSS1-209ENST00000497345 CFAP74Q9C0B2 1584 aa6.86□□□□□ -1.31
CMSS1-209ENST00000497345 DENND4BO75064 1496 aaPredicted RBP6.85□□□□□ -1.31
CMSS1-209ENST00000497345 FAM181BA6NEQ2 426 aa6.85□□□□□ -1.31
CMSS1-209ENST00000497345 FIGNL2A6NMB9 653 aa6.85□□□□□ -1.31
CMSS1-209ENST00000497345 SPINT1O43278 529 aa6.85□□□□□ -1.31
CMSS1-209ENST00000497345 NBPF20Q3BBV1 942 aa6.85□□□□□ -1.31
CMSS1-209ENST00000497345 TRIM34Q9BYJ4 488 aa6.85□□□□□ -1.31
CMSS1-209ENST00000497345 MAST1Q9Y2H9 1570 aa6.85□□□□□ -1.31
CMSS1-209ENST00000497345 ATP7AQ04656 1500 aa6.85□□□□□ -1.31
CMSS1-209ENST00000497345 KIF13AQ9H1H9 1805 aa6.85□□□□□ -1.31
CMSS1-209ENST00000497345 MLECQ14165 292 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms