RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 TCHHQ07283 1943 aa15.53■□□□□ 0.08
VEGFA-215ENST00000497139 GLI2P10070 1586 aa15.53■□□□□ 0.08
VEGFA-215ENST00000497139 KIF3BO15066 747 aa15.52■□□□□ 0.08
VEGFA-215ENST00000497139 ZSCAN22P10073 491 aaPredicted RBP15.52■□□□□ 0.08
VEGFA-215ENST00000497139 CCDC171Q6TFL3 1326 aa15.52■□□□□ 0.08
VEGFA-215ENST00000497139 TUBGCP6Q96RT7 1819 aa15.52■□□□□ 0.08
VEGFA-215ENST00000497139 KIDINS220Q9ULH0 1771 aa15.52■□□□□ 0.08
VEGFA-215ENST00000497139 C16orf71Q8IYS4 520 aaPredicted RBP15.52■□□□□ 0.08
VEGFA-215ENST00000497139 KIF1BPQ96EK5 621 aa15.52■□□□□ 0.08
VEGFA-215ENST00000497139 EFCAB6Q5THR3 1501 aa15.52■□□□□ 0.07
VEGFA-215ENST00000497139 DIAPH1O60610 1272 aaKnown RBP15.52■□□□□ 0.07
VEGFA-215ENST00000497139 PTGS1P23219 599 aa15.52■□□□□ 0.07
VEGFA-215ENST00000497139 PLCB2Q00722 1185 aa15.52■□□□□ 0.07
VEGFA-215ENST00000497139 TULP4Q9NRJ4 1543 aa15.51■□□□□ 0.07
VEGFA-215ENST00000497139 CAPN2P17655 700 aa15.51■□□□□ 0.07
VEGFA-215ENST00000497139 CYP2C19P33261 490 aa15.51■□□□□ 0.07
VEGFA-215ENST00000497139 LMTK2Q8IWU2 1503 aa15.51■□□□□ 0.07
VEGFA-215ENST00000497139 SPC24Q8NBT2 197 aa15.51■□□□□ 0.07
VEGFA-215ENST00000497139 ARHGEF40Q8TER5 1519 aa15.51■□□□□ 0.07
VEGFA-215ENST00000497139 ERO1AQ96HE7 468 aa15.51■□□□□ 0.07
VEGFA-215ENST00000497139 ESYT1Q9BSJ8 1104 aa15.51■□□□□ 0.07
VEGFA-215ENST00000497139 IRX3P78415 501 aaPredicted RBP15.51■□□□□ 0.07
VEGFA-215ENST00000497139 C16orf45Q96MC5 204 aaPredicted RBP15.51■□□□□ 0.07
VEGFA-215ENST00000497139 CNPY2Q9Y2B0 182 aa15.51■□□□□ 0.07
VEGFA-215ENST00000497139 PPLO60437 1756 aa15.5■□□□□ 0.07
VEGFA-215ENST00000497139 NEMFO60524 1076 aa15.5■□□□□ 0.07
VEGFA-215ENST00000497139 KMT5BQ4FZB7 885 aa15.5■□□□□ 0.07
VEGFA-215ENST00000497139 CYB5RLQ6IPT4 315 aa15.5■□□□□ 0.07
VEGFA-215ENST00000497139 EFCC1Q9HA90 598 aa15.5■□□□□ 0.07
VEGFA-215ENST00000497139 ZNF853P0CG23 659 aa15.5■□□□□ 0.07
VEGFA-215ENST00000497139 CEP85Q6P2H3 762 aa15.5■□□□□ 0.07
VEGFA-215ENST00000497139 C14orf93Q9H972 538 aaKnown RBP15.5■□□□□ 0.07
VEGFA-215ENST00000497139 CEP135Q66GS9 1140 aa15.49■□□□□ 0.07
VEGFA-215ENST00000497139 OTUD7AQ8TE49 926 aaPredicted RBP15.49■□□□□ 0.07
VEGFA-215ENST00000497139 FRMPD1Q5SYB0 1578 aa15.49■□□□□ 0.07
VEGFA-215ENST00000497139 CDC25BP30305 580 aa15.49■□□□□ 0.07
VEGFA-215ENST00000497139 HAP1P54257 671 aaPredicted RBP15.49■□□□□ 0.07
VEGFA-215ENST00000497139 BMS1Q14692 1282 aaKnown RBP15.48■□□□□ 0.07
VEGFA-215ENST00000497139 ZSCAN25Q6NSZ9 544 aa15.48■□□□□ 0.07
VEGFA-215ENST00000497139 GIMAP6Q6P9H5 292 aa15.48■□□□□ 0.07
VEGFA-215ENST00000497139 PLCD3Q8N3E9 789 aa15.48■□□□□ 0.07
VEGFA-215ENST00000497139 YY1AP1Q9H869 796 aa15.48■□□□□ 0.07
VEGFA-215ENST00000497139 HMMRO75330 724 aa15.48■□□□□ 0.07
VEGFA-215ENST00000497139 NFE2L2Q16236 605 aa15.48■□□□□ 0.07
VEGFA-215ENST00000497139 CCDC186Q7Z3E2 898 aa15.48■□□□□ 0.07
VEGFA-215ENST00000497139 NOL10Q9BSC4 688 aaKnown RBP15.48■□□□□ 0.07
VEGFA-215ENST00000497139 ARHGEF28Q8N1W1 1705 aaKnown RBP15.48■□□□□ 0.07
VEGFA-215ENST00000497139 KIF2AO00139 706 aaPredicted RBP15.47■□□□□ 0.07
VEGFA-215ENST00000497139 F13A1P00488 732 aa15.47■□□□□ 0.07
VEGFA-215ENST00000497139 TPD52L1Q16890 204 aaPredicted RBP15.47■□□□□ 0.07
VEGFA-215ENST00000497139 TWISTNBQ3B726 338 aaPredicted RBP15.47■□□□□ 0.07
VEGFA-215ENST00000497139 PLA2G4DQ86XP0 818 aa15.47■□□□□ 0.07
VEGFA-215ENST00000497139 UGGT1Q9NYU2 1555 aa15.47■□□□□ 0.07
VEGFA-215ENST00000497139 CPSF1Q10570 1443 aaKnown RBP15.47■□□□□ 0.07
VEGFA-215ENST00000497139 HTATSF1O43719 755 aaKnown RBP15.47■□□□□ 0.07
VEGFA-215ENST00000497139 STX6O43752 255 aa15.47■□□□□ 0.07
VEGFA-215ENST00000497139 PDE1AP54750 535 aa15.47■□□□□ 0.07
VEGFA-215ENST00000497139 TRAK1Q9UPV9 953 aa15.47■□□□□ 0.07
VEGFA-215ENST00000497139 KCND1Q9NSA2 647 aa15.46■□□□□ 0.07
VEGFA-215ENST00000497139 FEZ2Q9UHY8 353 aaPredicted RBP15.46■□□□□ 0.07
VEGFA-215ENST00000497139 RBM6P78332 1123 aaKnown RBP15.46■□□□□ 0.07
VEGFA-215ENST00000497139 MUM1L1Q5H9M0 696 aa15.46■□□□□ 0.07
VEGFA-215ENST00000497139 CAVIN2O95810 425 aa15.45■□□□□ 0.06
VEGFA-215ENST00000497139 LMOD3Q0VAK6 560 aa15.45■□□□□ 0.06
VEGFA-215ENST00000497139 TSPYL6Q8N831 410 aa15.45■□□□□ 0.06
VEGFA-215ENST00000497139 A0A1W2PP64 1363 aa15.45■□□□□ 0.06
VEGFA-215ENST00000497139 TRIM6-TRIM34B2RNG4 842 aa15.45■□□□□ 0.06
VEGFA-215ENST00000497139 ZNF75DP51815 510 aa15.45■□□□□ 0.06
VEGFA-215ENST00000497139 MAP3K11Q16584 847 aa15.45■□□□□ 0.06
VEGFA-215ENST00000497139 TRIM34Q9BYJ4 488 aa15.45■□□□□ 0.06
VEGFA-215ENST00000497139 PALD1Q9ULE6 856 aa15.45■□□□□ 0.06
VEGFA-215ENST00000497139 RIMBP3CA6NJZ7 1639 aa15.45■□□□□ 0.06
VEGFA-215ENST00000497139 RIMBP3BA6NNM3 1639 aa15.45■□□□□ 0.06
VEGFA-215ENST00000497139 RIMBP3Q9UFD9 1639 aa15.45■□□□□ 0.06
VEGFA-215ENST00000497139 NPM1P06748 294 aaKnown RBP eCLIP15.45■□□□□ 0.06
VEGFA-215ENST00000497139 FBXO38Q6PIJ6 1188 aa15.45■□□□□ 0.06
VEGFA-215ENST00000497139 ERICH4A6NGS2 130 aa15.44■□□□□ 0.06
VEGFA-215ENST00000497139 FOXD4L6Q3SYB3 417 aaPredicted RBP15.44■□□□□ 0.06
VEGFA-215ENST00000497139 CTR9Q6PD62 1173 aa15.44■□□□□ 0.06
VEGFA-215ENST00000497139 FOXD4L3Q6VB84 417 aaPredicted RBP15.44■□□□□ 0.06
VEGFA-215ENST00000497139 NYAP1Q6ZVC0 841 aa15.44■□□□□ 0.06
VEGFA-215ENST00000497139 AEBP1Q8IUX7 1158 aa15.44■□□□□ 0.06
VEGFA-215ENST00000497139 TDRD7Q8NHU6 1098 aaKnown RBP15.44■□□□□ 0.06
VEGFA-215ENST00000497139 MBIPQ9NS73 344 aa15.44■□□□□ 0.06
VEGFA-215ENST00000497139 KIAA0232Q92628 1395 aa15.44■□□□□ 0.06
VEGFA-215ENST00000497139 TEX35Q5T0J7 233 aa15.44■□□□□ 0.06
VEGFA-215ENST00000497139 DRC7Q8IY82 874 aa15.44■□□□□ 0.06
VEGFA-215ENST00000497139 TXLNBQ8N3L3 684 aa15.44■□□□□ 0.06
VEGFA-215ENST00000497139 POGZQ7Z3K3 1410 aa15.44■□□□□ 0.06
VEGFA-215ENST00000497139 MLH3Q9UHC1 1453 aa15.43■□□□□ 0.06
VEGFA-215ENST00000497139 SLU7O95391 586 aaKnown RBP15.43■□□□□ 0.06
VEGFA-215ENST00000497139 SYT1P21579 422 aa15.43■□□□□ 0.06
VEGFA-215ENST00000497139 TYRO3Q06418 890 aa15.43■□□□□ 0.06
VEGFA-215ENST00000497139 NAA30Q147X3 362 aaPredicted RBP15.43■□□□□ 0.06
VEGFA-215ENST00000497139 TEX2Q8IWB9 1127 aa15.43■□□□□ 0.06
VEGFA-215ENST00000497139 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.43■□□□□ 0.06
VEGFA-215ENST00000497139 ZNF215Q9UL58 517 aaPredicted RBP15.43■□□□□ 0.06
VEGFA-215ENST00000497139 MRVI1Q9Y6F6 885 aa15.43■□□□□ 0.06
VEGFA-215ENST00000497139 ELP1O95163 1332 aa15.43■□□□□ 0.06
VEGFA-215ENST00000497139 RPGRIP1LQ68CZ1 1315 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms