RNA–Protein interactions for RNA: ENST00000496360.5

MACF1-223, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 2,080 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-223ENST00000496360 COL22A1Q8NFW1 1626 aaPredicted RBP18.27■□□□□ 0.51
MACF1-223ENST00000496360 PRR36Q9H6K5 1346 aa18.26■□□□□ 0.51
MACF1-223ENST00000496360 ST18O60284 1047 aa18.26■□□□□ 0.51
MACF1-223ENST00000496360 PRDM10Q9NQV6 1147 aa18.26■□□□□ 0.51
MACF1-223ENST00000496360 KIF3AQ9Y496 699 aa18.26■□□□□ 0.51
MACF1-223ENST00000496360 ZNF772Q68DY9 489 aaPredicted RBP18.26■□□□□ 0.51
MACF1-223ENST00000496360 TSPY26PQ9H489 355 aa18.26■□□□□ 0.51
MACF1-223ENST00000496360 PRPF40AO75400 957 aaKnown RBP18.25■□□□□ 0.51
MACF1-223ENST00000496360 PUS7Q96PZ0 661 aaKnown RBP18.25■□□□□ 0.51
MACF1-223ENST00000496360 SPATA31A3Q5VYP0 1347 aa18.25■□□□□ 0.51
MACF1-223ENST00000496360 DNTTIP2Q5QJE6 756 aaKnown RBP18.24■□□□□ 0.51
MACF1-223ENST00000496360 SPTLC3Q9NUV7 552 aa18.24■□□□□ 0.51
MACF1-223ENST00000496360 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.24■□□□□ 0.51
MACF1-223ENST00000496360 PSME1Q06323 249 aa18.24■□□□□ 0.51
MACF1-223ENST00000496360 ARHGAP45Q92619 1136 aa18.24■□□□□ 0.51
MACF1-223ENST00000496360 RBM42Q9BTD8 480 aaKnown RBP18.24■□□□□ 0.51
MACF1-223ENST00000496360 TMEM63CQ9P1W3 806 aa18.24■□□□□ 0.51
MACF1-223ENST00000496360 ADAMTS2O95450 1211 aa18.23■□□□□ 0.51
MACF1-223ENST00000496360 ANKRD45Q5TZF3 282 aa18.23■□□□□ 0.51
MACF1-223ENST00000496360 AFF2P51816 1311 aa18.23■□□□□ 0.51
MACF1-223ENST00000496360 MTHFSP49914 203 aa18.22■□□□□ 0.51
MACF1-223ENST00000496360 ZNF710Q8N1W2 664 aa18.22■□□□□ 0.51
MACF1-223ENST00000496360 C8orf37Q96NL8 207 aa18.22■□□□□ 0.51
MACF1-223ENST00000496360 FEZ1Q99689 392 aa18.22■□□□□ 0.51
MACF1-223ENST00000496360 DIAPH3Q9NSV4 1193 aa18.22■□□□□ 0.51
MACF1-223ENST00000496360 PPIP5K1Q6PFW1 1433 aa18.22■□□□□ 0.51
MACF1-223ENST00000496360 SYCE3A1L190 88 aa18.22■□□□□ 0.51
MACF1-223ENST00000496360 CDK19Q9BWU1 502 aa18.22■□□□□ 0.51
MACF1-223ENST00000496360 SBNO1A3KN83 1393 aa18.22■□□□□ 0.51
MACF1-223ENST00000496360 ATP7BP35670 1465 aa18.21■□□□□ 0.51
MACF1-223ENST00000496360 TPM3P06753 285 aa18.21■□□□□ 0.51
MACF1-223ENST00000496360 NOLC1Q14978 699 aaKnown RBP eCLIP18.21■□□□□ 0.51
MACF1-223ENST00000496360 NUDT16Q96DE0 195 aaKnown RBP18.21■□□□□ 0.51
MACF1-223ENST00000496360 TNS3Q68CZ2 1445 aa18.21■□□□□ 0.51
MACF1-223ENST00000496360 FKBP5Q13451 457 aaPredicted RBP18.21■□□□□ 0.51
MACF1-223ENST00000496360 INTS3Q68E01 1043 aaKnown RBP18.2■□□□□ 0.5
MACF1-223ENST00000496360 USP26Q9BXU7 913 aa18.2■□□□□ 0.5
MACF1-223ENST00000496360 U2AF1L5P0DN76 240 aaPredicted RBP18.19■□□□□ 0.5
MACF1-223ENST00000496360 MCM2P49736 904 aa18.19■□□□□ 0.5
MACF1-223ENST00000496360 U2AF1Q01081 240 aaKnown RBP eCLIP18.19■□□□□ 0.5
MACF1-223ENST00000496360 CASC1Q6TDU7 716 aa18.19■□□□□ 0.5
MACF1-223ENST00000496360 NGLY1Q96IV0 654 aa18.19■□□□□ 0.5
MACF1-223ENST00000496360 RBM27Q9P2N5 1060 aaKnown RBP18.19■□□□□ 0.5
MACF1-223ENST00000496360 ITSN1Q15811 1721 aa18.19■□□□□ 0.5
MACF1-223ENST00000496360 TSR2Q969E8 191 aaKnown RBP18.19■□□□□ 0.5
MACF1-223ENST00000496360 KIF24Q5T7B8 1368 aa18.19■□□□□ 0.5
MACF1-223ENST00000496360 TMPOP42166 694 aaKnown RBP18.18■□□□□ 0.5
MACF1-223ENST00000496360 PDCL2Q8N4E4 241 aa18.18■□□□□ 0.5
MACF1-223ENST00000496360 QRICH2Q9H0J4 1663 aa18.18■□□□□ 0.5
MACF1-223ENST00000496360 ZBTB7BO15156 539 aaPredicted RBP18.18■□□□□ 0.5
MACF1-223ENST00000496360 CHAF1AQ13111 956 aaPredicted RBP18.18■□□□□ 0.5
MACF1-223ENST00000496360 SYCP1Q15431 976 aa18.18■□□□□ 0.5
MACF1-223ENST00000496360 NGDNQ8NEJ9 315 aaKnown RBP18.18■□□□□ 0.5
MACF1-223ENST00000496360 ARHGEF10O15013 1369 aa18.17■□□□□ 0.5
MACF1-223ENST00000496360 CBX1P83916 185 aa18.17■□□□□ 0.5
MACF1-223ENST00000496360 ZDHHC9Q9Y397 364 aa18.17■□□□□ 0.5
MACF1-223ENST00000496360 PLEKHF1Q96S99 279 aa18.16■□□□□ 0.5
MACF1-223ENST00000496360 ANKRD36BQ8N2N9 1353 aa18.16■□□□□ 0.5
MACF1-223ENST00000496360 PDE4CQ08493 712 aa18.16■□□□□ 0.5
MACF1-223ENST00000496360 ANKRD7Q92527 254 aa18.16■□□□□ 0.5
MACF1-223ENST00000496360 TRIM35Q9UPQ4 493 aa18.16■□□□□ 0.5
MACF1-223ENST00000496360 CCDC61Q9Y6R9 512 aa18.16■□□□□ 0.5
MACF1-223ENST00000496360 TRPM3Q9HCF6 1732 aaPredicted RBP18.15■□□□□ 0.5
MACF1-223ENST00000496360 GABPB1Q06547 395 aaPredicted RBP18.15■□□□□ 0.5
MACF1-223ENST00000496360 LMOD2Q6P5Q4 547 aa18.15■□□□□ 0.5
MACF1-223ENST00000496360 ARID3AQ99856 593 aa18.15■□□□□ 0.5
MACF1-223ENST00000496360 TOPAZ1Q8N9V7 1692 aa18.15■□□□□ 0.5
MACF1-223ENST00000496360 REC8O95072 547 aa18.14■□□□□ 0.5
MACF1-223ENST00000496360 SRPK2P78362 688 aaKnown RBP18.14■□□□□ 0.5
MACF1-223ENST00000496360 BBXQ8WY36 941 aaPredicted RBP18.14■□□□□ 0.5
MACF1-223ENST00000496360 MARF1Q9Y4F3 1742 aaKnown RBP18.14■□□□□ 0.49
MACF1-223ENST00000496360 RXRBP28702 533 aa18.14■□□□□ 0.49
MACF1-223ENST00000496360 TTC22Q5TAA0 569 aa18.14■□□□□ 0.49
MACF1-223ENST00000496360 FNBP4Q8N3X1 1017 aaPredicted RBP18.14■□□□□ 0.49
MACF1-223ENST00000496360 BCL2L12Q9HB09 334 aa18.14■□□□□ 0.49
MACF1-223ENST00000496360 BRD1O95696 1058 aa18.13■□□□□ 0.49
MACF1-223ENST00000496360 ATP2B3Q16720 1220 aa18.13■□□□□ 0.49
MACF1-223ENST00000496360 AK9Q5TCS8 1911 aa18.13■□□□□ 0.49
MACF1-223ENST00000496360 CTIFO43310 598 aaKnown RBP18.13■□□□□ 0.49
MACF1-223ENST00000496360 INTS4Q96HW7 963 aaKnown RBP18.13■□□□□ 0.49
MACF1-223ENST00000496360 QTRT2Q9H974 415 aaKnown RBP18.13■□□□□ 0.49
MACF1-223ENST00000496360 OGFRQ9NZT2 677 aa18.13■□□□□ 0.49
MACF1-223ENST00000496360 USP21Q9UK80 565 aa18.13■□□□□ 0.49
MACF1-223ENST00000496360 PLEKHG3A1L390 1219 aa18.12■□□□□ 0.49
MACF1-223ENST00000496360 PKP1Q13835 747 aa18.12■□□□□ 0.49
MACF1-223ENST00000496360 CABP2Q9NPB3 220 aa18.12■□□□□ 0.49
MACF1-223ENST00000496360 ALS2Q96Q42 1657 aa18.11■□□□□ 0.49
MACF1-223ENST00000496360 GSPT1P15170 499 aaKnown RBP18.11■□□□□ 0.49
MACF1-223ENST00000496360 GTF2E1P29083 439 aaPredicted RBP18.11■□□□□ 0.49
MACF1-223ENST00000496360 HAP1P54257 671 aaPredicted RBP18.11■□□□□ 0.49
MACF1-223ENST00000496360 PLEKHM2Q8IWE5 1019 aa18.11■□□□□ 0.49
MACF1-223ENST00000496360 CABLES1Q8TDN4 633 aa18.11■□□□□ 0.49
MACF1-223ENST00000496360 ATAD2Q6PL18 1390 aa18.11■□□□□ 0.49
MACF1-223ENST00000496360 FAM193AP78312 1265 aa18.11■□□□□ 0.49
MACF1-223ENST00000496360 RNF214Q8ND24 703 aa18.11■□□□□ 0.49
MACF1-223ENST00000496360 ACEP12821 1306 aa18.1■□□□□ 0.49
MACF1-223ENST00000496360 EVC2Q86UK5 1308 aa18.1■□□□□ 0.49
MACF1-223ENST00000496360 ABCC4O15439 1325 aa18.1■□□□□ 0.49
MACF1-223ENST00000496360 COL3A1P02461 1466 aaPredicted RBP18.1■□□□□ 0.49
MACF1-223ENST00000496360 RBM6P78332 1123 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms