RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 LGR6Q9HBX8 967 aa18.38■□□□□ 0.53
CHTOP-206ENST00000495554 SOS1Q07889 1333 aaPredicted RBP18.38■□□□□ 0.53
CHTOP-206ENST00000495554 MEIS3Q99687 375 aa18.38■□□□□ 0.53
CHTOP-206ENST00000495554 A0A0U1RQG5 324 aaPredicted RBP18.37■□□□□ 0.53
CHTOP-206ENST00000495554 HSPA2P54652 639 aa18.37■□□□□ 0.53
CHTOP-206ENST00000495554 TBC1D9Q6ZT07 1266 aa18.37■□□□□ 0.53
CHTOP-206ENST00000495554 PLEKHM2Q8IWE5 1019 aa18.37■□□□□ 0.53
CHTOP-206ENST00000495554 KIF1AQ12756 1690 aa18.37■□□□□ 0.53
CHTOP-206ENST00000495554 HSCBQ8IWL3 235 aa18.37■□□□□ 0.53
CHTOP-206ENST00000495554 DDX17Q92841 729 aaKnown RBP18.37■□□□□ 0.53
CHTOP-206ENST00000495554 NCAPD2Q15021 1401 aa18.37■□□□□ 0.53
CHTOP-206ENST00000495554 ATF3P18847 181 aa18.37■□□□□ 0.53
CHTOP-206ENST00000495554 TAF7LQ5H9L4 462 aa18.37■□□□□ 0.53
CHTOP-206ENST00000495554 F6X3S4 739 aa18.36■□□□□ 0.53
CHTOP-206ENST00000495554 CCDC30Q5VVM6 783 aa18.36■□□□□ 0.53
CHTOP-206ENST00000495554 ANKRD24Q8TF21 1146 aa18.36■□□□□ 0.53
CHTOP-206ENST00000495554 CDC45O75419 566 aa18.36■□□□□ 0.53
CHTOP-206ENST00000495554 SNX21Q969T3 373 aa18.36■□□□□ 0.53
CHTOP-206ENST00000495554 HMMRO75330 724 aa18.35■□□□□ 0.53
CHTOP-206ENST00000495554 NCOA3Q9Y6Q9 1424 aa18.35■□□□□ 0.53
CHTOP-206ENST00000495554 SLC4A10Q6U841 1118 aa18.35■□□□□ 0.53
CHTOP-206ENST00000495554 GSPT1P15170 499 aaKnown RBP18.34■□□□□ 0.53
CHTOP-206ENST00000495554 ALS2Q96Q42 1657 aa18.34■□□□□ 0.53
CHTOP-206ENST00000495554 TTC22Q5TAA0 569 aa18.34■□□□□ 0.53
CHTOP-206ENST00000495554 NECTIN2Q92692 538 aa18.34■□□□□ 0.53
CHTOP-206ENST00000495554 PLEKHO1Q53GL0 409 aaPredicted RBP18.33■□□□□ 0.52
CHTOP-206ENST00000495554 AKAP4Q5JQC9 854 aa18.33■□□□□ 0.52
CHTOP-206ENST00000495554 ZMYND15Q9H091 742 aa18.33■□□□□ 0.52
CHTOP-206ENST00000495554 MED1Q15648 1581 aaPredicted RBP18.33■□□□□ 0.52
CHTOP-206ENST00000495554 DCCP43146 1447 aa18.33■□□□□ 0.52
CHTOP-206ENST00000495554 FLIIQ13045 1269 aa18.33■□□□□ 0.52
CHTOP-206ENST00000495554 ZC3H6P61129 1189 aaKnown RBP18.32■□□□□ 0.52
CHTOP-206ENST00000495554 ZNF530Q6P9A1 599 aaPredicted RBP18.32■□□□□ 0.52
CHTOP-206ENST00000495554 SPRYD3Q8NCJ5 442 aa18.32■□□□□ 0.52
CHTOP-206ENST00000495554 CHMP5Q9NZZ3 219 aa18.32■□□□□ 0.52
CHTOP-206ENST00000495554 EIF4A1P60842 406 aaKnown RBP18.31■□□□□ 0.52
CHTOP-206ENST00000495554 AMOTQ4VCS5 1084 aa18.31■□□□□ 0.52
CHTOP-206ENST00000495554 C16orf71Q8IYS4 520 aaPredicted RBP18.31■□□□□ 0.52
CHTOP-206ENST00000495554 KCNQ3O43525 872 aa18.31■□□□□ 0.52
CHTOP-206ENST00000495554 FKBP5Q13451 457 aaPredicted RBP18.31■□□□□ 0.52
CHTOP-206ENST00000495554 MPRIPQ6WCQ1 1025 aa18.31■□□□□ 0.52
CHTOP-206ENST00000495554 GNAI2P04899 355 aa18.3■□□□□ 0.52
CHTOP-206ENST00000495554 CADPS2Q86UW7 1296 aa18.3■□□□□ 0.52
CHTOP-206ENST00000495554 KIF2CQ99661 725 aa18.3■□□□□ 0.52
CHTOP-206ENST00000495554 RGPD5Q99666 1765 aa18.3■□□□□ 0.52
CHTOP-206ENST00000495554 LMO7Q8WWI1 1683 aa18.29■□□□□ 0.52
CHTOP-206ENST00000495554 FAM208AQ9UK61 1670 aaKnown RBP18.29■□□□□ 0.52
CHTOP-206ENST00000495554 PXDNQ92626 1479 aa18.29■□□□□ 0.52
CHTOP-206ENST00000495554 ERBB3P21860 1342 aa18.29■□□□□ 0.52
CHTOP-206ENST00000495554 TULP1O00294 542 aaPredicted RBP18.29■□□□□ 0.52
CHTOP-206ENST00000495554 CAMTA1Q9Y6Y1 1673 aa18.29■□□□□ 0.52
CHTOP-206ENST00000495554 CACNA1FO60840 1977 aa18.29■□□□□ 0.52
CHTOP-206ENST00000495554 RNMTO43148 476 aaKnown RBP18.29■□□□□ 0.52
CHTOP-206ENST00000495554 GNAI3P08754 354 aa18.29■□□□□ 0.52
CHTOP-206ENST00000495554 HOMEZQ8IX15 550 aa18.29■□□□□ 0.52
CHTOP-206ENST00000495554 HDGFL1Q5TGJ6 251 aa18.27■□□□□ 0.52
CHTOP-206ENST00000495554 OTUD7AQ8TE49 926 aaPredicted RBP18.27■□□□□ 0.52
CHTOP-206ENST00000495554 APBB1O00213 710 aa18.27■□□□□ 0.51
CHTOP-206ENST00000495554 SMARCA5O60264 1052 aaPredicted RBP18.27■□□□□ 0.51
CHTOP-206ENST00000495554 CABLES1Q8TDN4 633 aa18.27■□□□□ 0.51
CHTOP-206ENST00000495554 PHAXQ9H814 394 aaKnown RBP18.27■□□□□ 0.51
CHTOP-206ENST00000495554 NPHP3Q7Z494 1330 aa18.26■□□□□ 0.51
CHTOP-206ENST00000495554 TEFQ10587 303 aa18.26■□□□□ 0.51
CHTOP-206ENST00000495554 KDM3BQ7LBC6 1761 aa18.26■□□□□ 0.51
CHTOP-206ENST00000495554 BTBD11A6QL63 1104 aa18.25■□□□□ 0.51
CHTOP-206ENST00000495554 CASC1Q6TDU7 716 aa18.25■□□□□ 0.51
CHTOP-206ENST00000495554 CHMP4AQ9BY43 222 aa18.25■□□□□ 0.51
CHTOP-206ENST00000495554 HSP90AB1P08238 724 aaKnown RBP18.25■□□□□ 0.51
CHTOP-206ENST00000495554 SDSP20132 328 aa18.25■□□□□ 0.51
CHTOP-206ENST00000495554 DDIT3P35638 169 aa18.25■□□□□ 0.51
CHTOP-206ENST00000495554 RBM10P98175 930 aaKnown RBP18.25■□□□□ 0.51
CHTOP-206ENST00000495554 C1orf141Q5JVX7 400 aa18.25■□□□□ 0.51
CHTOP-206ENST00000495554 OSBPL3Q9H4L5 887 aa18.25■□□□□ 0.51
CHTOP-206ENST00000495554 PXDNLA1KZ92 1463 aa18.24■□□□□ 0.51
CHTOP-206ENST00000495554 KDM4FA0A1W2PPD8 638 aa18.24■□□□□ 0.51
CHTOP-206ENST00000495554 HOXB7P09629 217 aa18.24■□□□□ 0.51
CHTOP-206ENST00000495554 EIF2S2P20042 333 aaKnown RBP18.24■□□□□ 0.51
CHTOP-206ENST00000495554 XIRP1Q702N8 1843 aaKnown RBP18.23■□□□□ 0.51
CHTOP-206ENST00000495554 COL18A1P39060 1754 aa18.23■□□□□ 0.51
CHTOP-206ENST00000495554 MCM4P33991 863 aa18.23■□□□□ 0.51
CHTOP-206ENST00000495554 SPATA31A3Q5VYP0 1347 aa18.23■□□□□ 0.51
CHTOP-206ENST00000495554 ATP8B2P98198 1209 aa18.23■□□□□ 0.51
CHTOP-206ENST00000495554 CIZ1Q9ULV3 898 aaPredicted RBP18.23■□□□□ 0.51
CHTOP-206ENST00000495554 TNS3Q68CZ2 1445 aa18.22■□□□□ 0.51
CHTOP-206ENST00000495554 GLIPR1L2Q4G1C9 344 aa18.22■□□□□ 0.51
CHTOP-206ENST00000495554 K7ELQ4 463 aaPredicted RBP18.22■□□□□ 0.51
CHTOP-206ENST00000495554 OVOS2A0A0G2JMS6 1433 aa18.21■□□□□ 0.51
CHTOP-206ENST00000495554 PDE1AP54750 535 aa18.21■□□□□ 0.51
CHTOP-206ENST00000495554 USP26Q9BXU7 913 aa18.21■□□□□ 0.51
CHTOP-206ENST00000495554 USP44Q9H0E7 712 aa18.21■□□□□ 0.51
CHTOP-206ENST00000495554 NLRP2Q9NX02 1062 aa18.21■□□□□ 0.51
CHTOP-206ENST00000495554 HEG1Q9ULI3 1381 aa18.21■□□□□ 0.51
CHTOP-206ENST00000495554 BRINP3Q76B58 766 aa18.21■□□□□ 0.51
CHTOP-206ENST00000495554 LRRCC1Q9C099 1032 aa18.21■□□□□ 0.51
CHTOP-206ENST00000495554 CHPF2Q9P2E5 772 aa18.21■□□□□ 0.51
CHTOP-206ENST00000495554 EXOC6BQ9Y2D4 811 aa18.21■□□□□ 0.51
CHTOP-206ENST00000495554 LMTK3Q96Q04 1460 aa18.2■□□□□ 0.5
CHTOP-206ENST00000495554 STRCQ7RTU9 1775 aa18.2■□□□□ 0.5
CHTOP-206ENST00000495554 CHRNA2Q15822 529 aa18.2■□□□□ 0.5
CHTOP-206ENST00000495554 CD2BP2O95400 341 aaKnown RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms