RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 ADAMTS8Q9UP79 889 aa18.03■□□□□ 0.48
FDPS-219ENST00000495308 PNNQ9H307 717 aaKnown RBP18.02■□□□□ 0.48
FDPS-219ENST00000495308 ANO8Q9HCE9 1232 aaPredicted RBP18.02■□□□□ 0.48
FDPS-219ENST00000495308 ATG3Q9NT62 314 aa18.02■□□□□ 0.48
FDPS-219ENST00000495308 CCNL1Q9UK58 526 aaPredicted RBP18.02■□□□□ 0.48
FDPS-219ENST00000495308 UBR2Q8IWV8 1755 aa18.02■□□□□ 0.47
FDPS-219ENST00000495308 R3HDM1Q15032 1099 aaKnown RBP18.01■□□□□ 0.47
FDPS-219ENST00000495308 IL17REQ8NFR9 667 aa18.01■□□□□ 0.47
FDPS-219ENST00000495308 SMARCC1Q92922 1105 aaPredicted RBP18.01■□□□□ 0.47
FDPS-219ENST00000495308 SLC52A2Q9HAB3 445 aa18.01■□□□□ 0.47
FDPS-219ENST00000495308 MRS2Q9HD23 443 aa18.01■□□□□ 0.47
FDPS-219ENST00000495308 ZNF831Q5JPB2 1677 aa18■□□□□ 0.47
FDPS-219ENST00000495308 SLC27A3Q5K4L6 730 aa18■□□□□ 0.47
FDPS-219ENST00000495308 NBPF14Q5TI25 921 aa18■□□□□ 0.47
FDPS-219ENST00000495308 COL5A3P25940 1745 aaPredicted RBP18■□□□□ 0.47
FDPS-219ENST00000495308 TJP1Q07157 1748 aa18■□□□□ 0.47
FDPS-219ENST00000495308 QSER1Q2KHR3 1735 aa18■□□□□ 0.47
FDPS-219ENST00000495308 C4BP0C0L5 1744 aa17.99■□□□□ 0.47
FDPS-219ENST00000495308 DCTN1Q14203 1278 aa17.99■□□□□ 0.47
FDPS-219ENST00000495308 NFE2L2Q16236 605 aa17.99■□□□□ 0.47
FDPS-219ENST00000495308 MCM10Q7L590 875 aa17.99■□□□□ 0.47
FDPS-219ENST00000495308 CEMIPQ8WUJ3 1361 aa17.99■□□□□ 0.47
FDPS-219ENST00000495308 TEFQ10587 303 aa17.98■□□□□ 0.47
FDPS-219ENST00000495308 RTF1Q92541 710 aaKnown RBP17.98■□□□□ 0.47
FDPS-219ENST00000495308 CASZ1Q86V15 1759 aa17.98■□□□□ 0.47
FDPS-219ENST00000495308 ZNF827Q17R98 1081 aa17.97■□□□□ 0.47
FDPS-219ENST00000495308 STK32BQ9NY57 414 aa17.97■□□□□ 0.47
FDPS-219ENST00000495308 KCPQ6ZWJ8 1503 aa17.97■□□□□ 0.47
FDPS-219ENST00000495308 LOC102724428A0A0B4J2F2 783 aa17.96■□□□□ 0.47
FDPS-219ENST00000495308 SIK1P57059 783 aa17.96■□□□□ 0.47
FDPS-219ENST00000495308 SLC39A6Q13433 755 aa17.96■□□□□ 0.47
FDPS-219ENST00000495308 RUNDC1Q96C34 613 aa17.96■□□□□ 0.47
FDPS-219ENST00000495308 RBM42Q9BTD8 480 aaKnown RBP17.96■□□□□ 0.47
FDPS-219ENST00000495308 RRP7AQ9Y3A4 280 aaKnown RBP17.96■□□□□ 0.47
FDPS-219ENST00000495308 CICQ96RK0 1608 aaPredicted RBP17.96■□□□□ 0.47
FDPS-219ENST00000495308 UBR3Q6ZT12 1888 aa17.96■□□□□ 0.47
FDPS-219ENST00000495308 PTCD1O75127 700 aaKnown RBP17.95■□□□□ 0.46
FDPS-219ENST00000495308 SLC15A2Q16348 729 aa17.95■□□□□ 0.46
FDPS-219ENST00000495308 SLC4A9Q96Q91 983 aa17.95■□□□□ 0.46
FDPS-219ENST00000495308 KDM3BQ7LBC6 1761 aa17.94■□□□□ 0.46
FDPS-219ENST00000495308 HTATSF1O43719 755 aaKnown RBP17.94■□□□□ 0.46
FDPS-219ENST00000495308 ATP6V1AP38606 617 aa17.94■□□□□ 0.46
FDPS-219ENST00000495308 TMPOP42166 694 aaKnown RBP17.94■□□□□ 0.46
FDPS-219ENST00000495308 RIPK4P57078 832 aa17.94■□□□□ 0.46
FDPS-219ENST00000495308 PNISRQ8TF01 805 aaKnown RBP17.94■□□□□ 0.46
FDPS-219ENST00000495308 THUMPD2Q9BTF0 503 aaKnown RBP17.94■□□□□ 0.46
FDPS-219ENST00000495308 ITPK1Q13572 414 aa17.93■□□□□ 0.46
FDPS-219ENST00000495308 NEUROD2Q15784 382 aa17.93■□□□□ 0.46
FDPS-219ENST00000495308 AKT1S1Q96B36 256 aa17.93■□□□□ 0.46
FDPS-219ENST00000495308 MYH14Q7Z406 1995 aaKnown RBP17.93■□□□□ 0.46
FDPS-219ENST00000495308 LINC00116Q8NCU8 138 aa17.92■□□□□ 0.46
FDPS-219ENST00000495308 DIEXFQ68CQ4 756 aaKnown RBP17.91■□□□□ 0.46
FDPS-219ENST00000495308 PDGFDQ9GZP0 370 aaPredicted RBP17.91■□□□□ 0.46
FDPS-219ENST00000495308 SENP3-EIF4A1A0A087X0R7 540 aa17.9■□□□□ 0.46
FDPS-219ENST00000495308 BTBD11A6QL63 1104 aa17.9■□□□□ 0.46
FDPS-219ENST00000495308 APAF1O14727 1248 aa17.89■□□□□ 0.45
FDPS-219ENST00000495308 KCNQ3O43525 872 aa17.89■□□□□ 0.45
FDPS-219ENST00000495308 ZNF790Q6PG37 636 aa17.89■□□□□ 0.45
FDPS-219ENST00000495308 TTC5Q8N0Z6 440 aa17.89■□□□□ 0.45
FDPS-219ENST00000495308 TFCP2L1Q9NZI6 479 aa17.89■□□□□ 0.45
FDPS-219ENST00000495308 FAM9BQ8IZU0 186 aa17.88■□□□□ 0.45
FDPS-219ENST00000495308 AK7Q96M32 723 aa17.88■□□□□ 0.45
FDPS-219ENST00000495308 MIS18AQ9NYP9 233 aa17.88■□□□□ 0.45
FDPS-219ENST00000495308 TRIM35Q9UPQ4 493 aa17.88■□□□□ 0.45
FDPS-219ENST00000495308 LMOD3Q0VAK6 560 aa17.87■□□□□ 0.45
FDPS-219ENST00000495308 TAF7Q15545 349 aaPredicted RBP17.87■□□□□ 0.45
FDPS-219ENST00000495308 PNPLA7Q6ZV29 1317 aa17.87■□□□□ 0.45
FDPS-219ENST00000495308 LRP5O75197 1615 aa17.87■□□□□ 0.45
FDPS-219ENST00000495308 C4AP0C0L4 1744 aa17.86■□□□□ 0.45
FDPS-219ENST00000495308 LAMB4A4D0S4 1761 aa17.86■□□□□ 0.45
FDPS-219ENST00000495308 SMIM5Q71RC9 77 aa17.86■□□□□ 0.45
FDPS-219ENST00000495308 AMIGO3Q86WK7 504 aa17.86■□□□□ 0.45
FDPS-219ENST00000495308 DNAJC10Q8IXB1 793 aa17.86■□□□□ 0.45
FDPS-219ENST00000495308 ZNF496Q96IT1 587 aaPredicted RBP17.86■□□□□ 0.45
FDPS-219ENST00000495308 HEG1Q9ULI3 1381 aa17.85■□□□□ 0.45
FDPS-219ENST00000495308 GNPATO15228 680 aa17.84■□□□□ 0.45
FDPS-219ENST00000495308 CNTNAP4Q9C0A0 1308 aa17.83■□□□□ 0.44
FDPS-219ENST00000495308 PHF14O94880 888 aa17.83■□□□□ 0.44
FDPS-219ENST00000495308 ZBTB7AO95365 584 aa17.83■□□□□ 0.44
FDPS-219ENST00000495308 HMGB2P26583 209 aaKnown RBP17.83■□□□□ 0.44
FDPS-219ENST00000495308 VSIG10Q8N0Z9 540 aa17.83■□□□□ 0.44
FDPS-219ENST00000495308 MIER1Q8N108 512 aa17.83■□□□□ 0.44
FDPS-219ENST00000495308 FMNL2Q96PY5 1086 aa17.83■□□□□ 0.44
FDPS-219ENST00000495308 COL24A1Q17RW2 1714 aa17.83■□□□□ 0.44
FDPS-219ENST00000495308 MSH5O43196 834 aa17.82■□□□□ 0.44
FDPS-219ENST00000495308 CRKLP46109 303 aaKnown RBP17.82■□□□□ 0.44
FDPS-219ENST00000495308 CCER2I3L3R5 266 aa17.81■□□□□ 0.44
FDPS-219ENST00000495308 COL23A1Q86Y22 540 aaPredicted RBP17.81■□□□□ 0.44
FDPS-219ENST00000495308 TSPYL4Q9UJ04 414 aa17.81■□□□□ 0.44
FDPS-219ENST00000495308 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.8■□□□□ 0.44
FDPS-219ENST00000495308 PRAMEF22A3QJZ6 481 aa17.8■□□□□ 0.44
FDPS-219ENST00000495308 CYP19A1P11511 503 aaPredicted RBP17.8■□□□□ 0.44
FDPS-219ENST00000495308 RC3H1Q5TC82 1133 aaKnown RBP17.8■□□□□ 0.44
FDPS-219ENST00000495308 LAS1LQ9Y4W2 734 aaKnown RBP17.8■□□□□ 0.44
FDPS-219ENST00000495308 INTS5Q6P9B9 1019 aaKnown RBP17.79■□□□□ 0.44
FDPS-219ENST00000495308 CCDC87Q9NVE4 849 aa17.79■□□□□ 0.44
FDPS-219ENST00000495308 ATF5Q9Y2D1 282 aaPredicted RBP17.79■□□□□ 0.44
FDPS-219ENST00000495308 SSFA2P28290 1259 aa17.78■□□□□ 0.44
FDPS-219ENST00000495308 ZBTB1Q9Y2K1 713 aa17.78■□□□□ 0.44
FDPS-219ENST00000495308 RTCBQ9Y3I0 505 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms