RNA–Protein interactions for RNA: ENST00000495141.5

UBE2E1-211, Transcript of ubiquitin conjugating enzyme E2 E1, humanhuman

TSL 2

Gene UBE2E1, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E1-211ENST00000495141 CYP27B1O15528 508 aa21.49■■□□□ 1.03
UBE2E1-211ENST00000495141 PHKG2P15735 406 aa21.49■■□□□ 1.03
UBE2E1-211ENST00000495141 ZNF530Q6P9A1 599 aaPredicted RBP21.49■■□□□ 1.03
UBE2E1-211ENST00000495141 MAPK8IP3Q9UPT6 1336 aa21.49■■□□□ 1.03
UBE2E1-211ENST00000495141 AKAP4Q5JQC9 854 aa21.48■■□□□ 1.03
UBE2E1-211ENST00000495141 RUNDC1Q96C34 613 aa21.48■■□□□ 1.03
UBE2E1-211ENST00000495141 SIPA1L3O60292 1781 aaPredicted RBP21.48■■□□□ 1.03
UBE2E1-211ENST00000495141 MRC1P22897 1456 aa21.47■■□□□ 1.03
UBE2E1-211ENST00000495141 MTHFSDQ2M296 383 aaKnown RBP21.47■■□□□ 1.03
UBE2E1-211ENST00000495141 C1orf141Q5JVX7 400 aa21.47■■□□□ 1.03
UBE2E1-211ENST00000495141 DDX54Q8TDD1 881 aaKnown RBP21.46■■□□□ 1.03
UBE2E1-211ENST00000495141 PHACTR3Q96KR7 559 aa21.46■■□□□ 1.03
UBE2E1-211ENST00000495141 GPR162Q16538 588 aa21.45■■□□□ 1.02
UBE2E1-211ENST00000495141 ZNF827Q17R98 1081 aa21.45■■□□□ 1.02
UBE2E1-211ENST00000495141 QSER1Q2KHR3 1735 aa21.44■■□□□ 1.02
UBE2E1-211ENST00000495141 HTATSF1O43719 755 aaKnown RBP21.44■■□□□ 1.02
UBE2E1-211ENST00000495141 DCAF5Q96JK2 942 aa21.44■■□□□ 1.02
UBE2E1-211ENST00000495141 KDM6AO15550 1401 aaPredicted RBP21.44■■□□□ 1.02
UBE2E1-211ENST00000495141 CEP350Q5VT06 3117 aa21.44■■□□□ 1.02
UBE2E1-211ENST00000495141 NFE2L2Q16236 605 aa21.43■■□□□ 1.02
UBE2E1-211ENST00000495141 NCBP3Q53F19 620 aaKnown RBP21.43■■□□□ 1.02
UBE2E1-211ENST00000495141 COL24A1Q17RW2 1714 aa21.42■■□□□ 1.02
UBE2E1-211ENST00000495141 LRRC4BQ9NT99 713 aa21.42■■□□□ 1.02
UBE2E1-211ENST00000495141 TUBGCP6Q96RT7 1819 aa21.41■■□□□ 1.02
UBE2E1-211ENST00000495141 GNAT3A8MTJ3 354 aa21.41■■□□□ 1.02
UBE2E1-211ENST00000495141 KLHL34Q8N239 644 aa21.41■■□□□ 1.02
UBE2E1-211ENST00000495141 ERVV-2B6SEH9 535 aa21.4■■□□□ 1.02
UBE2E1-211ENST00000495141 GIGYF1O75420 1035 aaPredicted RBP21.4■■□□□ 1.02
UBE2E1-211ENST00000495141 CEMIPQ8WUJ3 1361 aa21.39■■□□□ 1.02
UBE2E1-211ENST00000495141 LY75O60449 1722 aa21.39■■□□□ 1.01
UBE2E1-211ENST00000495141 LMOD3Q0VAK6 560 aa21.39■■□□□ 1.01
UBE2E1-211ENST00000495141 NGEFQ8N5V2 710 aa21.39■■□□□ 1.01
UBE2E1-211ENST00000495141 TMPOP42166 694 aaKnown RBP21.38■■□□□ 1.01
UBE2E1-211ENST00000495141 CCDC146Q8IYE0 955 aa21.38■■□□□ 1.01
UBE2E1-211ENST00000495141 IFFO2Q5TF58 517 aa21.37■■□□□ 1.01
UBE2E1-211ENST00000495141 PELP1Q8IZL8 1130 aaKnown RBP21.37■■□□□ 1.01
UBE2E1-211ENST00000495141 FAM9BQ8IZU0 186 aa21.37■■□□□ 1.01
UBE2E1-211ENST00000495141 SLC16A10Q8TF71 515 aa21.37■■□□□ 1.01
UBE2E1-211ENST00000495141 AKT1S1Q96B36 256 aa21.37■■□□□ 1.01
UBE2E1-211ENST00000495141 ZNF831Q5JPB2 1677 aa21.37■■□□□ 1.01
UBE2E1-211ENST00000495141 RNMTO43148 476 aaKnown RBP21.36■■□□□ 1.01
UBE2E1-211ENST00000495141 POLD1P28340 1107 aa21.36■■□□□ 1.01
UBE2E1-211ENST00000495141 UBR2Q8IWV8 1755 aa21.36■■□□□ 1.01
UBE2E1-211ENST00000495141 RTF1Q92541 710 aaKnown RBP21.35■■□□□ 1.01
UBE2E1-211ENST00000495141 CICQ96RK0 1608 aaPredicted RBP21.35■■□□□ 1.01
UBE2E1-211ENST00000495141 PNPLA7Q6ZV29 1317 aa21.34■■□□□ 1.01
UBE2E1-211ENST00000495141 KDM3BQ7LBC6 1761 aa21.34■■□□□ 1.01
UBE2E1-211ENST00000495141 MPRIPQ6WCQ1 1025 aa21.34■■□□□ 1.01
UBE2E1-211ENST00000495141 CCDC27Q2M243 656 aa21.33■■□□□ 1.01
UBE2E1-211ENST00000495141 SLC27A3Q5K4L6 730 aa21.33■■□□□ 1.01
UBE2E1-211ENST00000495141 NLGN2Q8NFZ4 835 aa21.33■■□□□ 1.01
UBE2E1-211ENST00000495141 APAF1O14727 1248 aa21.32■■□□□ 1
UBE2E1-211ENST00000495141 RIPK4P57078 832 aa21.32■■□□□ 1
UBE2E1-211ENST00000495141 PRIM1P49642 420 aaKnown RBP21.31■■□□□ 1
UBE2E1-211ENST00000495141 IL17REQ8NFR9 667 aa21.31■■□□□ 1
UBE2E1-211ENST00000495141 SLC52A2Q9HAB3 445 aa21.31■■□□□ 1
UBE2E1-211ENST00000495141 TMOD3Q9NYL9 352 aa21.31■■□□□ 1
UBE2E1-211ENST00000495141 KCNQ4P56696 695 aa21.3■■□□□ 1
UBE2E1-211ENST00000495141 LGR6Q9HBX8 967 aa21.3■■□□□ 1
UBE2E1-211ENST00000495141 TFCP2L1Q9NZI6 479 aa21.3■■□□□ 1
UBE2E1-211ENST00000495141 CABP4P57796 275 aa21.29■■□□□ 1
UBE2E1-211ENST00000495141 TEFQ10587 303 aa21.29■■□□□ 1
UBE2E1-211ENST00000495141 TAF1LQ8IZX4 1826 aa21.28■■□□□ 1
UBE2E1-211ENST00000495141 TRIM35Q9UPQ4 493 aa21.28■■□□□ 1
UBE2E1-211ENST00000495141 CALD1Q05682 793 aaKnown RBP21.27■■□□□ 1
UBE2E1-211ENST00000495141 PIGBQ92521 554 aa21.27■■□□□ 1
UBE2E1-211ENST00000495141 SMARCC1Q92922 1105 aaPredicted RBP21.27■■□□□ 1
UBE2E1-211ENST00000495141 SYTL4Q96C24 671 aaPredicted RBP21.27■■□□□ 1
UBE2E1-211ENST00000495141 BABAM1Q9NWV8 329 aa21.27■■□□□ 1
UBE2E1-211ENST00000495141 YBX3P16989 372 aaKnown RBP eCLIP21.26■□□□□ 0.994e-8■□□□□ 9.6
UBE2E1-211ENST00000495141 MCM10Q7L590 875 aa21.26■□□□□ 0.99
UBE2E1-211ENST00000495141 RRP7AQ9Y3A4 280 aaKnown RBP21.26■□□□□ 0.99
UBE2E1-211ENST00000495141 GRIN3BO60391 1043 aa21.24■□□□□ 0.99
UBE2E1-211ENST00000495141 HMGB2P26583 209 aaKnown RBP21.24■□□□□ 0.99
UBE2E1-211ENST00000495141 NFATC2IPQ8NCF5 419 aa21.24■□□□□ 0.99
UBE2E1-211ENST00000495141 KCPQ6ZWJ8 1503 aa21.24■□□□□ 0.99
UBE2E1-211ENST00000495141 COL5A3P25940 1745 aaPredicted RBP21.24■□□□□ 0.99
UBE2E1-211ENST00000495141 NEUROD2Q15784 382 aa21.23■□□□□ 0.99
UBE2E1-211ENST00000495141 C5P01031 1676 aa21.23■□□□□ 0.99
UBE2E1-211ENST00000495141 LAMB4A4D0S4 1761 aa21.23■□□□□ 0.99
UBE2E1-211ENST00000495141 PALLDQ8WX93 1383 aa21.23■□□□□ 0.99
UBE2E1-211ENST00000495141 DCTN1Q14203 1278 aa21.22■□□□□ 0.99
UBE2E1-211ENST00000495141 TAF7Q15545 349 aaPredicted RBP21.22■□□□□ 0.99
UBE2E1-211ENST00000495141 IL16Q14005 1332 aa21.22■□□□□ 0.99
UBE2E1-211ENST00000495141 TJP1Q07157 1748 aa21.21■□□□□ 0.99
UBE2E1-211ENST00000495141 ATP10DQ9P241 1426 aa21.21■□□□□ 0.99
UBE2E1-211ENST00000495141 MSH5O43196 834 aa21.2■□□□□ 0.98
UBE2E1-211ENST00000495141 WWC1Q8IX03 1113 aa21.2■□□□□ 0.98
UBE2E1-211ENST00000495141 ATG3Q9NT62 314 aa21.2■□□□□ 0.98
UBE2E1-211ENST00000495141 CCNL1Q9UK58 526 aaPredicted RBP21.2■□□□□ 0.98
UBE2E1-211ENST00000495141 COL23A1Q86Y22 540 aaPredicted RBP21.19■□□□□ 0.98
UBE2E1-211ENST00000495141 WDR63Q8IWG1 891 aa21.19■□□□□ 0.98
UBE2E1-211ENST00000495141 ZNF521Q96K83 1311 aa21.19■□□□□ 0.98
UBE2E1-211ENST00000495141 BTBD11A6QL63 1104 aa21.18■□□□□ 0.98
UBE2E1-211ENST00000495141 THUMPD2Q9BTF0 503 aaKnown RBP21.18■□□□□ 0.98
UBE2E1-211ENST00000495141 IFT57Q9NWB7 429 aa21.18■□□□□ 0.98
UBE2E1-211ENST00000495141 ASAP1Q9ULH1 1129 aa21.18■□□□□ 0.98
UBE2E1-211ENST00000495141 MSL1Q68DK7 614 aa21.17■□□□□ 0.98
UBE2E1-211ENST00000495141 ZNF790Q6PG37 636 aa21.17■□□□□ 0.98
UBE2E1-211ENST00000495141 CFAP44Q96MT7 982 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms