RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 NFATC2IPQ8NCF5 419 aa19.72■□□□□ 0.75
ATG4B-224ENST00000494132 U2AF1L5P0DN76 240 aaPredicted RBP19.71■□□□□ 0.75
ATG4B-224ENST00000494132 PRKAR2BP31323 418 aa19.71■□□□□ 0.75
ATG4B-224ENST00000494132 ATP6V1AP38606 617 aa19.71■□□□□ 0.75
ATG4B-224ENST00000494132 U2AF1Q01081 240 aaKnown RBP eCLIP19.71■□□□□ 0.75
ATG4B-224ENST00000494132 ITPK1Q13572 414 aa19.71■□□□□ 0.75
ATG4B-224ENST00000494132 SMIM5Q71RC9 77 aa19.71■□□□□ 0.75
ATG4B-224ENST00000494132 RBM42Q9BTD8 480 aaKnown RBP19.71■□□□□ 0.75
ATG4B-224ENST00000494132 MTFR1LQ9H019 292 aa19.71■□□□□ 0.75
ATG4B-224ENST00000494132 RNMTO43148 476 aaKnown RBP19.7■□□□□ 0.74
ATG4B-224ENST00000494132 MSH5O43196 834 aa19.7■□□□□ 0.74
ATG4B-224ENST00000494132 PTGER2P43116 358 aa19.7■□□□□ 0.74
ATG4B-224ENST00000494132 LINC00116Q8NCU8 138 aa19.7■□□□□ 0.74
ATG4B-224ENST00000494132 RSPH6AQ9H0K4 717 aa19.7■□□□□ 0.74
ATG4B-224ENST00000494132 NUDCQ9Y266 331 aa19.7■□□□□ 0.74
ATG4B-224ENST00000494132 DLG5Q8TDM6 1919 aa19.7■□□□□ 0.74
ATG4B-224ENST00000494132 MYH14Q7Z406 1995 aaKnown RBP19.7■□□□□ 0.74
ATG4B-224ENST00000494132 TJP1Q07157 1748 aa19.69■□□□□ 0.74
ATG4B-224ENST00000494132 COL24A1Q17RW2 1714 aa19.69■□□□□ 0.74
ATG4B-224ENST00000494132 AMIGO3Q86WK7 504 aa19.69■□□□□ 0.74
ATG4B-224ENST00000494132 COL23A1Q86Y22 540 aaPredicted RBP19.69■□□□□ 0.74
ATG4B-224ENST00000494132 PHACTR3Q96KR7 559 aa19.69■□□□□ 0.74
ATG4B-224ENST00000494132 SLC4A9Q96Q91 983 aa19.69■□□□□ 0.74
ATG4B-224ENST00000494132 ZNF831Q5JPB2 1677 aa19.68■□□□□ 0.74
ATG4B-224ENST00000494132 MRC1P22897 1456 aa19.68■□□□□ 0.74
ATG4B-224ENST00000494132 SIPA1L3O60292 1781 aaPredicted RBP19.68■□□□□ 0.74
ATG4B-224ENST00000494132 AK7Q96M32 723 aa19.68■□□□□ 0.74
ATG4B-224ENST00000494132 PTCD1O75127 700 aaKnown RBP19.67■□□□□ 0.74
ATG4B-224ENST00000494132 PHF14O94880 888 aa19.67■□□□□ 0.74
ATG4B-224ENST00000494132 SLC52A2Q9HAB3 445 aa19.67■□□□□ 0.74
ATG4B-224ENST00000494132 MAP3K5Q99683 1374 aa19.66■□□□□ 0.74
ATG4B-224ENST00000494132 SLC39A6Q13433 755 aa19.65■□□□□ 0.74
ATG4B-224ENST00000494132 MSL1Q68DK7 614 aa19.65■□□□□ 0.74
ATG4B-224ENST00000494132 GAS2L2Q8NHY3 880 aa19.65■□□□□ 0.74
ATG4B-224ENST00000494132 SGIP1Q9BQI5 828 aa19.65■□□□□ 0.74
ATG4B-224ENST00000494132 UBR2Q8IWV8 1755 aa19.64■□□□□ 0.73
ATG4B-224ENST00000494132 GNAT3A8MTJ3 354 aa19.63■□□□□ 0.73
ATG4B-224ENST00000494132 GNPATO15228 680 aa19.63■□□□□ 0.73
ATG4B-224ENST00000494132 RALBP1Q15311 655 aa19.63■□□□□ 0.73
ATG4B-224ENST00000494132 IL17REQ8NFR9 667 aa19.62■□□□□ 0.73
ATG4B-224ENST00000494132 SLC16A10Q8TF71 515 aa19.62■□□□□ 0.73
ATG4B-224ENST00000494132 C4AP0C0L4 1744 aa19.62■□□□□ 0.73
ATG4B-224ENST00000494132 KCPQ6ZWJ8 1503 aa19.61■□□□□ 0.73
ATG4B-224ENST00000494132 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.61■□□□□ 0.73
ATG4B-224ENST00000494132 KLHL34Q8N239 644 aa19.61■□□□□ 0.73
ATG4B-224ENST00000494132 CICQ96RK0 1608 aaPredicted RBP19.61■□□□□ 0.73
ATG4B-224ENST00000494132 FCHSD2O94868 740 aa19.6■□□□□ 0.73
ATG4B-224ENST00000494132 ARXQ96QS3 562 aa19.6■□□□□ 0.73
ATG4B-224ENST00000494132 FHDC1Q9C0D6 1143 aaPredicted RBP19.6■□□□□ 0.73
ATG4B-224ENST00000494132 MYBBP1AQ9BQG0 1328 aaKnown RBP19.59■□□□□ 0.73
ATG4B-224ENST00000494132 POLD1P28340 1107 aa19.58■□□□□ 0.72
ATG4B-224ENST00000494132 TEFQ10587 303 aa19.58■□□□□ 0.72
ATG4B-224ENST00000494132 FLAD1Q8NFF5 587 aa19.58■□□□□ 0.72
ATG4B-224ENST00000494132 HMGB2P26583 209 aaKnown RBP19.57■□□□□ 0.72
ATG4B-224ENST00000494132 SSFA2P28290 1259 aa19.57■□□□□ 0.72
ATG4B-224ENST00000494132 DCTN1Q14203 1278 aa19.57■□□□□ 0.72
ATG4B-224ENST00000494132 DNAJC10Q8IXB1 793 aa19.57■□□□□ 0.72
ATG4B-224ENST00000494132 MCM10Q7L590 875 aa19.56■□□□□ 0.72
ATG4B-224ENST00000494132 SYT17Q9BSW7 474 aa19.56■□□□□ 0.72
ATG4B-224ENST00000494132 CNTNAP4Q9C0A0 1308 aa19.55■□□□□ 0.72
ATG4B-224ENST00000494132 CRKLP46109 303 aaKnown RBP19.55■□□□□ 0.72
ATG4B-224ENST00000494132 PRKRIP1Q9H875 184 aaPredicted RBP19.55■□□□□ 0.72
ATG4B-224ENST00000494132 RTCBQ9Y3I0 505 aaKnown RBP19.55■□□□□ 0.72
ATG4B-224ENST00000494132 CEMIPQ8WUJ3 1361 aa19.55■□□□□ 0.72
ATG4B-224ENST00000494132 TTC5Q8N0Z6 440 aa19.54■□□□□ 0.72
ATG4B-224ENST00000494132 RTF1Q92541 710 aaKnown RBP19.53■□□□□ 0.72
ATG4B-224ENST00000494132 PLEKHF1Q96S99 279 aa19.53■□□□□ 0.72
ATG4B-224ENST00000494132 ZNF316A6NFI3 1004 aaPredicted RBP19.52■□□□□ 0.72
ATG4B-224ENST00000494132 KCNQ3O43525 872 aa19.52■□□□□ 0.72
ATG4B-224ENST00000494132 NEFMP07197 916 aa19.52■□□□□ 0.72
ATG4B-224ENST00000494132 RC3H1Q5TC82 1133 aaKnown RBP19.52■□□□□ 0.72
ATG4B-224ENST00000494132 RPS6KA4O75676 772 aa19.51■□□□□ 0.71
ATG4B-224ENST00000494132 TRAPPC3LQ5T215 181 aa19.51■□□□□ 0.71
ATG4B-224ENST00000494132 ZNF790Q6PG37 636 aa19.51■□□□□ 0.71
ATG4B-224ENST00000494132 ARHGEF1Q92888 912 aaKnown RBP19.51■□□□□ 0.71
ATG4B-224ENST00000494132 ZNF496Q96IT1 587 aaPredicted RBP19.51■□□□□ 0.71
ATG4B-224ENST00000494132 MAPK8IP3Q9UPT6 1336 aa19.51■□□□□ 0.71
ATG4B-224ENST00000494132 BTBD11A6QL63 1104 aa19.5■□□□□ 0.71
ATG4B-224ENST00000494132 INTS5Q6P9B9 1019 aaKnown RBP19.5■□□□□ 0.71
ATG4B-224ENST00000494132 CYP19A1P11511 503 aaPredicted RBP19.49■□□□□ 0.71
ATG4B-224ENST00000494132 NLGN2Q8NFZ4 835 aa19.49■□□□□ 0.71
ATG4B-224ENST00000494132 KDM3BQ7LBC6 1761 aa19.49■□□□□ 0.71
ATG4B-224ENST00000494132 HEG1Q9ULI3 1381 aa19.48■□□□□ 0.71
ATG4B-224ENST00000494132 NFE2L2Q16236 605 aa19.48■□□□□ 0.71
ATG4B-224ENST00000494132 CCDC146Q8IYE0 955 aa19.48■□□□□ 0.71
ATG4B-224ENST00000494132 THUMPD2Q9BTF0 503 aaKnown RBP19.48■□□□□ 0.71
ATG4B-224ENST00000494132 CCDC87Q9NVE4 849 aa19.48■□□□□ 0.71
ATG4B-224ENST00000494132 SRP68Q9UHB9 627 aaKnown RBP19.48■□□□□ 0.71
ATG4B-224ENST00000494132 ZBTB1Q9Y2K1 713 aa19.48■□□□□ 0.71
ATG4B-224ENST00000494132 RFC4P35249 363 aa19.47■□□□□ 0.71
ATG4B-224ENST00000494132 MIS18AQ9NYP9 233 aa19.47■□□□□ 0.71
ATG4B-224ENST00000494132 ADRA2BP18089 450 aa19.46■□□□□ 0.71
ATG4B-224ENST00000494132 HTATSF1O43719 755 aaKnown RBP19.45■□□□□ 0.7
ATG4B-224ENST00000494132 GYS1P13807 737 aa19.45■□□□□ 0.7
ATG4B-224ENST00000494132 CANXP27824 592 aaKnown RBP19.45■□□□□ 0.7
ATG4B-224ENST00000494132 WDR43Q15061 677 aaKnown RBP eCLIP19.45■□□□□ 0.7
ATG4B-224ENST00000494132 VSIG10Q8N0Z9 540 aa19.45■□□□□ 0.7
ATG4B-224ENST00000494132 PNNQ9H307 717 aaKnown RBP19.45■□□□□ 0.7
ATG4B-224ENST00000494132 RRP7AQ9Y3A4 280 aaKnown RBP19.45■□□□□ 0.7
ATG4B-224ENST00000494132 SOS1Q07889 1333 aaPredicted RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms