RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 TSPYL4Q9UJ04 414 aa18.17■□□□□ 0.5
PDZRN3-210ENST00000492909 THRAP3Q9Y2W1 955 aaKnown RBP18.17■□□□□ 0.5
PDZRN3-210ENST00000492909 SIPA1L3O60292 1781 aaPredicted RBP18.17■□□□□ 0.5
PDZRN3-210ENST00000492909 RARSP54136 660 aaKnown RBP18.16■□□□□ 0.5
PDZRN3-210ENST00000492909 DCAF5Q96JK2 942 aa18.16■□□□□ 0.5
PDZRN3-210ENST00000492909 MIS18AQ9NYP9 233 aa18.16■□□□□ 0.5
PDZRN3-210ENST00000492909 KDM6AO15550 1401 aaPredicted RBP18.16■□□□□ 0.5
PDZRN3-210ENST00000492909 ONECUT3O60422 494 aaPredicted RBP18.15■□□□□ 0.5
PDZRN3-210ENST00000492909 BARGINQ6ZT62 677 aa18.15■□□□□ 0.5
PDZRN3-210ENST00000492909 CDCA7Q9BWT1 371 aaPredicted RBP18.15■□□□□ 0.5
PDZRN3-210ENST00000492909 ZNF428Q96B54 188 aa18.14■□□□□ 0.5
PDZRN3-210ENST00000492909 KDM3BQ7LBC6 1761 aa18.14■□□□□ 0.49
PDZRN3-210ENST00000492909 ERICH6BQ5W0A0 696 aa18.14■□□□□ 0.49
PDZRN3-210ENST00000492909 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.14■□□□□ 0.49
PDZRN3-210ENST00000492909 THSD7AQ9UPZ6 1657 aa18.13■□□□□ 0.49
PDZRN3-210ENST00000492909 BCAR3O75815 825 aa18.13■□□□□ 0.49
PDZRN3-210ENST00000492909 IRX6P78412 446 aaPredicted RBP18.13■□□□□ 0.49
PDZRN3-210ENST00000492909 TWISTNBQ3B726 338 aaPredicted RBP18.13■□□□□ 0.49
PDZRN3-210ENST00000492909 C8orf58Q8NAV2 365 aa18.13■□□□□ 0.49
PDZRN3-210ENST00000492909 VAMP4O75379 141 aa18.12■□□□□ 0.49
PDZRN3-210ENST00000492909 TSPYL6Q8N831 410 aa18.12■□□□□ 0.49
PDZRN3-210ENST00000492909 DDX54Q8TDD1 881 aaKnown RBP18.12■□□□□ 0.49
PDZRN3-210ENST00000492909 BRWD3Q6RI45 1802 aa18.12■□□□□ 0.49
PDZRN3-210ENST00000492909 ELL2O00472 640 aaPredicted RBP18.12■□□□□ 0.49
PDZRN3-210ENST00000492909 MRC1P22897 1456 aa18.11■□□□□ 0.49
PDZRN3-210ENST00000492909 BTBD11A6QL63 1104 aa18.11■□□□□ 0.49
PDZRN3-210ENST00000492909 EXOC5O00471 708 aa18.11■□□□□ 0.49
PDZRN3-210ENST00000492909 NKX1-1Q15270 411 aaPredicted RBP18.11■□□□□ 0.49
PDZRN3-210ENST00000492909 FAM182BQ5T319 152 aa18.11■□□□□ 0.49
PDZRN3-210ENST00000492909 SLC52A2Q9HAB3 445 aa18.11■□□□□ 0.49
PDZRN3-210ENST00000492909 TNS2Q63HR2 1409 aa18.1■□□□□ 0.49
PDZRN3-210ENST00000492909 PLIN1O60240 522 aa18.1■□□□□ 0.49
PDZRN3-210ENST00000492909 ALDH1L2Q3SY69 923 aa18.1■□□□□ 0.49
PDZRN3-210ENST00000492909 BCL2L13Q9BXK5 485 aa18.1■□□□□ 0.49
PDZRN3-210ENST00000492909 KRT24Q2M2I5 525 aa18.09■□□□□ 0.49
PDZRN3-210ENST00000492909 SMC4Q9NTJ3 1288 aa18.09■□□□□ 0.49
PDZRN3-210ENST00000492909 SSH1Q8WYL5 1049 aa18.09■□□□□ 0.49
PDZRN3-210ENST00000492909 NFATC2IPQ8NCF5 419 aa18.08■□□□□ 0.48
PDZRN3-210ENST00000492909 ERVV-2B6SEH9 535 aa18.07■□□□□ 0.48
PDZRN3-210ENST00000492909 CABP4P57796 275 aa18.07■□□□□ 0.48
PDZRN3-210ENST00000492909 DDB1Q16531 1140 aa18.07■□□□□ 0.48
PDZRN3-210ENST00000492909 KRT27Q7Z3Y8 459 aa18.07■□□□□ 0.48
PDZRN3-210ENST00000492909 SOS1Q07889 1333 aaPredicted RBP18.07■□□□□ 0.48
PDZRN3-210ENST00000492909 CANXP27824 592 aaKnown RBP18.07■□□□□ 0.48
PDZRN3-210ENST00000492909 TOGARAM1Q9Y4F4 1720 aa18.06■□□□□ 0.48
PDZRN3-210ENST00000492909 EIF4A1P60842 406 aaKnown RBP18.06■□□□□ 0.48
PDZRN3-210ENST00000492909 FRAT1Q92837 279 aaPredicted RBP18.06■□□□□ 0.48
PDZRN3-210ENST00000492909 KIF16BQ96L93 1317 aa18.05■□□□□ 0.48
PDZRN3-210ENST00000492909 EP400Q96L91 3159 aa18.05■□□□□ 0.48
PDZRN3-210ENST00000492909 KCNQ3O43525 872 aa18.04■□□□□ 0.48
PDZRN3-210ENST00000492909 BRPF1P55201 1214 aaPredicted RBP18.04■□□□□ 0.48
PDZRN3-210ENST00000492909 ZNF790Q6PG37 636 aa18.04■□□□□ 0.48
PDZRN3-210ENST00000492909 ITGB4P16144 1822 aa18.03■□□□□ 0.48
PDZRN3-210ENST00000492909 KAT6BQ8WYB5 2073 aa18.03■□□□□ 0.48
PDZRN3-210ENST00000492909 MARCH10Q8NA82 808 aaPredicted RBP18.03■□□□□ 0.48
PDZRN3-210ENST00000492909 CACNA1FO60840 1977 aa18.03■□□□□ 0.48
PDZRN3-210ENST00000492909 HOXB7P09629 217 aa18.02■□□□□ 0.48
PDZRN3-210ENST00000492909 C20orf194Q5TEA3 1177 aa18.02■□□□□ 0.48
PDZRN3-210ENST00000492909 ZKSCAN2Q63HK3 967 aa18.02■□□□□ 0.48
PDZRN3-210ENST00000492909 PDE3AQ14432 1141 aa18.02■□□□□ 0.47
PDZRN3-210ENST00000492909 TTC5Q8N0Z6 440 aa18.02■□□□□ 0.47
PDZRN3-210ENST00000492909 MRPL50Q8N5N7 158 aaKnown RBP18.02■□□□□ 0.47
PDZRN3-210ENST00000492909 TCERG1O14776 1098 aaKnown RBP18.01■□□□□ 0.47
PDZRN3-210ENST00000492909 IPO8O15397 1037 aaKnown RBP18.01■□□□□ 0.47
PDZRN3-210ENST00000492909 SLC39A6Q13433 755 aa18.01■□□□□ 0.47
PDZRN3-210ENST00000492909 PPP4R2Q9NY27 417 aa18.01■□□□□ 0.47
PDZRN3-210ENST00000492909 HEG1Q9ULI3 1381 aa18■□□□□ 0.47
PDZRN3-210ENST00000492909 PAPPAQ13219 1627 aa18■□□□□ 0.47
PDZRN3-210ENST00000492909 CHMP4AQ9BY43 222 aa18■□□□□ 0.47
PDZRN3-210ENST00000492909 TMOD3Q9NYL9 352 aa18■□□□□ 0.47
PDZRN3-210ENST00000492909 NOB1Q9ULX3 412 aaKnown RBP18■□□□□ 0.47
PDZRN3-210ENST00000492909 DOT1LQ8TEK3 1739 aa18■□□□□ 0.47
PDZRN3-210ENST00000492909 MS4A1P11836 297 aa17.99■□□□□ 0.47
PDZRN3-210ENST00000492909 CCDC30Q5VVM6 783 aa17.99■□□□□ 0.47
PDZRN3-210ENST00000492909 UBR2Q8IWV8 1755 aa17.99■□□□□ 0.47
PDZRN3-210ENST00000492909 ATF7IPQ6VMQ6 1270 aa17.99■□□□□ 0.47
PDZRN3-210ENST00000492909 STK31Q9BXU1 1019 aa17.99■□□□□ 0.47
PDZRN3-210ENST00000492909 RBM19Q9Y4C8 960 aaKnown RBP17.99■□□□□ 0.47
PDZRN3-210ENST00000492909 GIGYF1O75420 1035 aaPredicted RBP17.98■□□□□ 0.47
PDZRN3-210ENST00000492909 HDGFL1Q5TGJ6 251 aa17.98■□□□□ 0.47
PDZRN3-210ENST00000492909 TRIM27P14373 513 aa17.97■□□□□ 0.47
PDZRN3-210ENST00000492909 EXOC6Q8TAG9 804 aa17.97■□□□□ 0.47
PDZRN3-210ENST00000492909 ARHGAP45Q92619 1136 aa17.97■□□□□ 0.47
PDZRN3-210ENST00000492909 CRBNQ96SW2 442 aa17.97■□□□□ 0.47
PDZRN3-210ENST00000492909 SLC4A2P04920 1241 aa17.96■□□□□ 0.47
PDZRN3-210ENST00000492909 ZNF496Q96IT1 587 aaPredicted RBP17.96■□□□□ 0.47
PDZRN3-210ENST00000492909 FMNL2Q96PY5 1086 aa17.96■□□□□ 0.47
PDZRN3-210ENST00000492909 C5P01031 1676 aa17.96■□□□□ 0.47
PDZRN3-210ENST00000492909 FTSJ3Q8IY81 847 aaKnown RBP17.96■□□□□ 0.47
PDZRN3-210ENST00000492909 DZIP1LQ8IYY4 767 aaKnown RBP17.96■□□□□ 0.47
PDZRN3-210ENST00000492909 PANK1Q8TE04 598 aa17.96■□□□□ 0.47
PDZRN3-210ENST00000492909 NECTIN2Q92692 538 aa17.96■□□□□ 0.47
PDZRN3-210ENST00000492909 CLUAP1Q96AJ1 413 aa17.96■□□□□ 0.47
PDZRN3-210ENST00000492909 BCL9O00512 1426 aa17.95■□□□□ 0.46
PDZRN3-210ENST00000492909 EIF2S2P20042 333 aaKnown RBP17.95■□□□□ 0.46
PDZRN3-210ENST00000492909 FAM196AQ6ZSG2 479 aa17.95■□□□□ 0.46
PDZRN3-210ENST00000492909 PIGBQ92521 554 aa17.95■□□□□ 0.46
PDZRN3-210ENST00000492909 TNNQ9UQP3 1299 aa17.95■□□□□ 0.46
PDZRN3-210ENST00000492909 PTF1AQ7RTS3 328 aa17.94■□□□□ 0.46
PDZRN3-210ENST00000492909 SNRPA1P09661 255 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms