RNA–Protein interactions for RNA: ENST00000492016.5

NELFCD-211, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 606 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-211ENST00000492016 SMARCC1Q92922 1105 aaPredicted RBP20.67■□□□□ 0.9
NELFCD-211ENST00000492016 CFAP44Q96MT7 982 aa20.67■□□□□ 0.9
NELFCD-211ENST00000492016 THUMPD2Q9BTF0 503 aaKnown RBP20.67■□□□□ 0.9
NELFCD-211ENST00000492016 IFT57Q9NWB7 429 aa20.67■□□□□ 0.9
NELFCD-211ENST00000492016 SBF2Q86WG5 1849 aa20.67■□□□□ 0.9
NELFCD-211ENST00000492016 BTBD11A6QL63 1104 aa20.65■□□□□ 0.9
NELFCD-211ENST00000492016 CHL1O00533 1208 aa20.65■□□□□ 0.9
NELFCD-211ENST00000492016 GNAI1P63096 354 aa20.65■□□□□ 0.9
NELFCD-211ENST00000492016 SALL2Q9Y467 1007 aaPredicted RBP20.65■□□□□ 0.9
NELFCD-211ENST00000492016 ZBED9Q6R2W3 1325 aa20.64■□□□□ 0.89
NELFCD-211ENST00000492016 PLSCR1O15162 318 aa20.64■□□□□ 0.89
NELFCD-211ENST00000492016 ZNF853P0CG23 659 aa20.64■□□□□ 0.89
NELFCD-211ENST00000492016 SF3B2Q13435 895 aaKnown RBP20.64■□□□□ 0.89
NELFCD-211ENST00000492016 ITGB4P16144 1822 aa20.63■□□□□ 0.89
NELFCD-211ENST00000492016 ZNF790Q6PG37 636 aa20.63■□□□□ 0.89
NELFCD-211ENST00000492016 ATG3Q9NT62 314 aa20.63■□□□□ 0.89
NELFCD-211ENST00000492016 SIPA1L3O60292 1781 aaPredicted RBP20.63■□□□□ 0.89
NELFCD-211ENST00000492016 HMGB2P26583 209 aaKnown RBP20.62■□□□□ 0.89
NELFCD-211ENST00000492016 GOLGA2Q08379 1002 aa20.62■□□□□ 0.89
NELFCD-211ENST00000492016 PTF1AQ7RTS3 328 aa20.62■□□□□ 0.89
NELFCD-211ENST00000492016 TTC5Q8N0Z6 440 aa20.62■□□□□ 0.89
NELFCD-211ENST00000492016 SENP3-EIF4A1A0A087X0R7 540 aa20.61■□□□□ 0.89
NELFCD-211ENST00000492016 APBA3O96018 575 aa20.61■□□□□ 0.89
NELFCD-211ENST00000492016 TSPYL4Q9UJ04 414 aa20.61■□□□□ 0.89
NELFCD-211ENST00000492016 ASAP1Q9ULH1 1129 aa20.61■□□□□ 0.89
NELFCD-211ENST00000492016 VIRMAQ69YN4 1812 aaKnown RBP20.61■□□□□ 0.89
NELFCD-211ENST00000492016 PALLDQ8WX93 1383 aa20.6■□□□□ 0.89
NELFCD-211ENST00000492016 PAPPAQ13219 1627 aa20.6■□□□□ 0.89
NELFCD-211ENST00000492016 TNS1Q9HBL0 1735 aaKnown RBP20.59■□□□□ 0.89
NELFCD-211ENST00000492016 E9PSI1 815 aa20.59■□□□□ 0.89
NELFCD-211ENST00000492016 BAG6P46379 1132 aa20.59■□□□□ 0.89
NELFCD-211ENST00000492016 UPF1Q92900 1129 aaKnown RBP eCLIP20.59■□□□□ 0.89
NELFCD-211ENST00000492016 MYH16Q9H6N6 1097 aa20.59■□□□□ 0.89
NELFCD-211ENST00000492016 BTAF1O14981 1849 aa20.59■□□□□ 0.89
NELFCD-211ENST00000492016 SLC39A6Q13433 755 aa20.58■□□□□ 0.89
NELFCD-211ENST00000492016 VSIG10Q8N0Z9 540 aa20.58■□□□□ 0.89
NELFCD-211ENST00000492016 EP400Q96L91 3159 aa20.57■□□□□ 0.88
NELFCD-211ENST00000492016 SLC27A3Q5K4L6 730 aa20.57■□□□□ 0.88
NELFCD-211ENST00000492016 FMNL2Q96PY5 1086 aa20.57■□□□□ 0.88
NELFCD-211ENST00000492016 MBIPQ9NS73 344 aa20.57■□□□□ 0.88
NELFCD-211ENST00000492016 LAS1LQ9Y4W2 734 aaKnown RBP20.57■□□□□ 0.88
NELFCD-211ENST00000492016 RGPD3A6NKT7 1758 aaPredicted RBP20.57■□□□□ 0.88
NELFCD-211ENST00000492016 RGPD4Q7Z3J3 1758 aa20.57■□□□□ 0.88
NELFCD-211ENST00000492016 EIF4A1P60842 406 aaKnown RBP20.56■□□□□ 0.88
NELFCD-211ENST00000492016 MIS18AQ9NYP9 233 aa20.56■□□□□ 0.88
NELFCD-211ENST00000492016 KCPQ6ZWJ8 1503 aa20.56■□□□□ 0.88
NELFCD-211ENST00000492016 HEG1Q9ULI3 1381 aa20.56■□□□□ 0.88
NELFCD-211ENST00000492016 KDM3BQ7LBC6 1761 aa20.55■□□□□ 0.88
NELFCD-211ENST00000492016 LOC102724428A0A0B4J2F2 783 aa20.55■□□□□ 0.88
NELFCD-211ENST00000492016 SIK1P57059 783 aa20.55■□□□□ 0.88
NELFCD-211ENST00000492016 SLFN5Q08AF3 891 aa20.55■□□□□ 0.88
NELFCD-211ENST00000492016 SOS1Q07889 1333 aaPredicted RBP20.54■□□□□ 0.88
NELFCD-211ENST00000492016 TRMT2AQ8IZ69 625 aaKnown RBP20.54■□□□□ 0.88
NELFCD-211ENST00000492016 ZNF496Q96IT1 587 aaPredicted RBP20.54■□□□□ 0.88
NELFCD-211ENST00000492016 TEX13AQ9BXU3 409 aaPredicted RBP20.54■□□□□ 0.88
NELFCD-211ENST00000492016 ZNF831Q5JPB2 1677 aa20.54■□□□□ 0.88
NELFCD-211ENST00000492016 KCNQ3O43525 872 aa20.53■□□□□ 0.88
NELFCD-211ENST00000492016 PTCD1O75127 700 aaKnown RBP20.53■□□□□ 0.88
NELFCD-211ENST00000492016 CAMKK2Q96RR4 588 aa20.53■□□□□ 0.88
NELFCD-211ENST00000492016 SPINK5Q9NQ38 1064 aaPredicted RBP20.53■□□□□ 0.88
NELFCD-211ENST00000492016 UBR2Q8IWV8 1755 aa20.53■□□□□ 0.88
NELFCD-211ENST00000492016 FANCIQ9NVI1 1328 aa20.53■□□□□ 0.88
NELFCD-211ENST00000492016 HOXB7P09629 217 aa20.52■□□□□ 0.88
NELFCD-211ENST00000492016 SNRPA1P09661 255 aaKnown RBP20.52■□□□□ 0.88
NELFCD-211ENST00000492016 TXNRD1Q16881 649 aa20.52■□□□□ 0.88
NELFCD-211ENST00000492016 RBM42Q9BTD8 480 aaKnown RBP20.52■□□□□ 0.88
NELFCD-211ENST00000492016 LY75O60449 1722 aa20.52■□□□□ 0.88
NELFCD-211ENST00000492016 CICQ96RK0 1608 aaPredicted RBP20.52■□□□□ 0.88
NELFCD-211ENST00000492016 KAT6BQ8WYB5 2073 aa20.52■□□□□ 0.87
NELFCD-211ENST00000492016 CHMP4AQ9BY43 222 aa20.51■□□□□ 0.87
NELFCD-211ENST00000492016 CCNL1Q9UK58 526 aaPredicted RBP20.51■□□□□ 0.87
NELFCD-211ENST00000492016 GIGYF1O75420 1035 aaPredicted RBP20.5■□□□□ 0.87
NELFCD-211ENST00000492016 ATP6V1AP38606 617 aa20.5■□□□□ 0.87
NELFCD-211ENST00000492016 EN1Q05925 392 aaPredicted RBP20.5■□□□□ 0.87
NELFCD-211ENST00000492016 PROM2Q8N271 834 aa20.5■□□□□ 0.87
NELFCD-211ENST00000492016 TSR2Q969E8 191 aaKnown RBP20.5■□□□□ 0.87
NELFCD-211ENST00000492016 SLC4A9Q96Q91 983 aa20.5■□□□□ 0.87
NELFCD-211ENST00000492016 CDCA7LQ96GN5 454 aa20.49■□□□□ 0.87
NELFCD-211ENST00000492016 DUSP27Q5VZP5 1158 aa20.48■□□□□ 0.87
NELFCD-211ENST00000492016 STARD3NLO95772 234 aa20.47■□□□□ 0.87
NELFCD-211ENST00000492016 EZH2Q15910 746 aaKnown RBP20.47■□□□□ 0.87
NELFCD-211ENST00000492016 DEFB132Q7Z7B7 95 aa20.47■□□□□ 0.87
NELFCD-211ENST00000492016 YTHDC1Q96MU7 727 aaKnown RBP20.47■□□□□ 0.87
NELFCD-211ENST00000492016 CT47B1P0C2W7 299 aaPredicted RBP20.46■□□□□ 0.87
NELFCD-211ENST00000492016 ITPK1Q13572 414 aa20.46■□□□□ 0.87
NELFCD-211ENST00000492016 LRRC4BQ9NT99 713 aa20.46■□□□□ 0.87
NELFCD-211ENST00000492016 RC3H1Q5TC82 1133 aaKnown RBP20.45■□□□□ 0.86
NELFCD-211ENST00000492016 DNAJC10Q8IXB1 793 aa20.45■□□□□ 0.86
NELFCD-211ENST00000492016 CYP19A1P11511 503 aaPredicted RBP20.44■□□□□ 0.86
NELFCD-211ENST00000492016 EXOSC9Q06265 439 aaKnown RBP20.44■□□□□ 0.86
NELFCD-211ENST00000492016 C8orf58Q8NAV2 365 aa20.44■□□□□ 0.86
NELFCD-211ENST00000492016 ZNF428Q96B54 188 aa20.44■□□□□ 0.86
NELFCD-211ENST00000492016 ERBB4Q15303 1308 aa20.44■□□□□ 0.86
NELFCD-211ENST00000492016 CNTNAP4Q9C0A0 1308 aa20.44■□□□□ 0.86
NELFCD-211ENST00000492016 C5P01031 1676 aa20.43■□□□□ 0.86
NELFCD-211ENST00000492016 TWISTNBQ3B726 338 aaPredicted RBP20.43■□□□□ 0.86
NELFCD-211ENST00000492016 RREB1Q92766 1687 aa20.42■□□□□ 0.86
NELFCD-211ENST00000492016 TJP1Q07157 1748 aa20.42■□□□□ 0.86
NELFCD-211ENST00000492016 SOCS7O14512 581 aa20.42■□□□□ 0.86
NELFCD-211ENST00000492016 KRT24Q2M2I5 525 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms