RNA–Protein interactions for RNA: ENST00000490692.1

PCSK9-202, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

TSL 2

Gene PCSK9, Length 3,891 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-202ENST00000490692 UBE2HP62256 183 aa13.66□□□□□ -0.22
PCSK9-202ENST00000490692 CWC27Q6UX04 472 aaKnown RBP13.66□□□□□ -0.22
PCSK9-202ENST00000490692 SYTL4Q96C24 671 aaPredicted RBP13.66□□□□□ -0.22
PCSK9-202ENST00000490692 DNAJC2Q99543 621 aaKnown RBP13.66□□□□□ -0.22
PCSK9-202ENST00000490692 TMEM51Q9NW97 253 aa13.66□□□□□ -0.22
PCSK9-202ENST00000490692 F6X3S4 739 aa13.66□□□□□ -0.22
PCSK9-202ENST00000490692 NUTM1Q86Y26 1132 aa13.66□□□□□ -0.22
PCSK9-202ENST00000490692 TPM4P67936 248 aa13.66□□□□□ -0.22
PCSK9-202ENST00000490692 SDF4Q9BRK5 362 aa13.66□□□□□ -0.22
PCSK9-202ENST00000490692 CD109Q6YHK3 1445 aa13.66□□□□□ -0.22
PCSK9-202ENST00000490692 SURF6O75683 361 aaKnown RBP13.65□□□□□ -0.22
PCSK9-202ENST00000490692 CASTP20810 708 aaKnown RBP13.65□□□□□ -0.22
PCSK9-202ENST00000490692 KIF18AQ8NI77 898 aa13.65□□□□□ -0.22
PCSK9-202ENST00000490692 UBXN4Q92575 508 aa13.65□□□□□ -0.22
PCSK9-202ENST00000490692 KDM5DQ9BY66 1539 aa13.65□□□□□ -0.22
PCSK9-202ENST00000490692 SHROOM2Q13796 1616 aa13.65□□□□□ -0.22
PCSK9-202ENST00000490692 ALDH1L2Q3SY69 923 aa13.65□□□□□ -0.22
PCSK9-202ENST00000490692 SPATA32Q96LK8 384 aa13.65□□□□□ -0.22
PCSK9-202ENST00000490692 INSRP06213 1382 aa13.65□□□□□ -0.22
PCSK9-202ENST00000490692 ZBTB7BO15156 539 aaPredicted RBP13.65□□□□□ -0.22
PCSK9-202ENST00000490692 MIS18AQ9NYP9 233 aa13.65□□□□□ -0.22
PCSK9-202ENST00000490692 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.65□□□□□ -0.22
PCSK9-202ENST00000490692 ZNF165P49910 485 aa13.65□□□□□ -0.23
PCSK9-202ENST00000490692 JAKMIP1Q96N16 626 aaKnown RBP13.65□□□□□ -0.23
PCSK9-202ENST00000490692 SRCIN1Q9C0H9 1055 aa13.65□□□□□ -0.23
PCSK9-202ENST00000490692 ANO6Q4KMQ2 910 aa13.64□□□□□ -0.23
PCSK9-202ENST00000490692 CCDC73Q6ZRK6 1079 aa13.64□□□□□ -0.23
PCSK9-202ENST00000490692 CREBRFQ8IUR6 639 aa13.64□□□□□ -0.23
PCSK9-202ENST00000490692 C10orf67Q8IYJ2 551 aa13.64□□□□□ -0.23
PCSK9-202ENST00000490692 KIF2CQ99661 725 aa13.64□□□□□ -0.23
PCSK9-202ENST00000490692 LRRCC1Q9C099 1032 aa13.64□□□□□ -0.23
PCSK9-202ENST00000490692 TOMM22Q9NS69 142 aa13.64□□□□□ -0.23
PCSK9-202ENST00000490692 FAM83GA6ND36 823 aa13.64□□□□□ -0.23
PCSK9-202ENST00000490692 TMCO3Q6UWJ1 677 aa13.64□□□□□ -0.23
PCSK9-202ENST00000490692 ABCC1P33527 1531 aa13.64□□□□□ -0.23
PCSK9-202ENST00000490692 GPATCH11Q8N954 259 aa13.64□□□□□ -0.23
PCSK9-202ENST00000490692 HDAC5Q9UQL6 1122 aa13.64□□□□□ -0.23
PCSK9-202ENST00000490692 CPA1P15085 419 aa13.63□□□□□ -0.23
PCSK9-202ENST00000490692 ELF2Q15723 593 aa13.63□□□□□ -0.23
PCSK9-202ENST00000490692 FAM173BQ6P4H8 233 aa13.63□□□□□ -0.23
PCSK9-202ENST00000490692 RPAP2Q8IXW5 612 aaPredicted RBP13.63□□□□□ -0.23
PCSK9-202ENST00000490692 CWC15Q9P013 229 aaKnown RBP13.63□□□□□ -0.23
PCSK9-202ENST00000490692 SPG7Q9UQ90 795 aa13.63□□□□□ -0.23
PCSK9-202ENST00000490692 IBTKQ9P2D0 1353 aaPredicted RBP13.63□□□□□ -0.23
PCSK9-202ENST00000490692 ZNF710Q8N1W2 664 aa13.63□□□□□ -0.23
PCSK9-202ENST00000490692 MEIS3Q99687 375 aa13.63□□□□□ -0.23
PCSK9-202ENST00000490692 ZSCAN22P10073 491 aaPredicted RBP13.63□□□□□ -0.23
PCSK9-202ENST00000490692 FAM193AP78312 1265 aa13.63□□□□□ -0.23
PCSK9-202ENST00000490692 NECAB1Q8N987 351 aa13.63□□□□□ -0.23
PCSK9-202ENST00000490692 POLR3AO14802 1390 aaPredicted RBP13.62□□□□□ -0.23
PCSK9-202ENST00000490692 SMTNL1A8MU46 457 aa13.62□□□□□ -0.23
PCSK9-202ENST00000490692 MAST1Q9Y2H9 1570 aa13.62□□□□□ -0.23
PCSK9-202ENST00000490692 PPFIA3O75145 1194 aa13.62□□□□□ -0.23
PCSK9-202ENST00000490692 URI1O94763 535 aaPredicted RBP13.62□□□□□ -0.23
PCSK9-202ENST00000490692 TTLL5Q6EMB2 1281 aa13.62□□□□□ -0.23
PCSK9-202ENST00000490692 DNAJC25Q9H1X3 360 aa13.62□□□□□ -0.23
PCSK9-202ENST00000490692 CLASP1Q7Z460 1538 aa13.62□□□□□ -0.23
PCSK9-202ENST00000490692 SKILP12757 684 aa13.62□□□□□ -0.23
PCSK9-202ENST00000490692 GJB2P29033 226 aa13.62□□□□□ -0.23
PCSK9-202ENST00000490692 PDILTQ8N807 584 aa13.62□□□□□ -0.23
PCSK9-202ENST00000490692 PAXBP1Q9Y5B6 917 aa13.62□□□□□ -0.23
PCSK9-202ENST00000490692 EIF2S2P20042 333 aaKnown RBP13.61□□□□□ -0.23
PCSK9-202ENST00000490692 FAM200AQ8TCP9 573 aa13.61□□□□□ -0.23
PCSK9-202ENST00000490692 DACT1Q9NYF0 836 aa13.61□□□□□ -0.23
PCSK9-202ENST00000490692 UHRF1BP1LA0JNW5 1464 aa13.61□□□□□ -0.23
PCSK9-202ENST00000490692 KINO60870 393 aaKnown RBP13.61□□□□□ -0.23
PCSK9-202ENST00000490692 TCEANC2Q96MN5 208 aa13.61□□□□□ -0.23
PCSK9-202ENST00000490692 UGGT1Q9NYU2 1555 aa13.61□□□□□ -0.23
PCSK9-202ENST00000490692 SCAF11Q99590 1463 aaKnown RBP13.61□□□□□ -0.23
PCSK9-202ENST00000490692 GABPB1Q06547 395 aaPredicted RBP13.61□□□□□ -0.23
PCSK9-202ENST00000490692 KRT24Q2M2I5 525 aa13.61□□□□□ -0.23
PCSK9-202ENST00000490692 LEKR1Q6ZMV7 388 aa13.61□□□□□ -0.23
PCSK9-202ENST00000490692 ZNF397Q8NF99 534 aaPredicted RBP13.61□□□□□ -0.23
PCSK9-202ENST00000490692 DDX11Q96FC9 970 aa13.61□□□□□ -0.23
PCSK9-202ENST00000490692 PDRG1Q9NUG6 133 aa13.61□□□□□ -0.23
PCSK9-202ENST00000490692 GNAI2P04899 355 aa13.6□□□□□ -0.23
PCSK9-202ENST00000490692 LMAN1P49257 510 aa13.6□□□□□ -0.23
PCSK9-202ENST00000490692 BMS1Q14692 1282 aaKnown RBP13.6□□□□□ -0.23
PCSK9-202ENST00000490692 NOM1Q5C9Z4 860 aaKnown RBP13.6□□□□□ -0.23
PCSK9-202ENST00000490692 ZNF526Q8TF50 670 aaPredicted RBP13.6□□□□□ -0.23
PCSK9-202ENST00000490692 MBIPQ9NS73 344 aa13.6□□□□□ -0.23
PCSK9-202ENST00000490692 BCCIPQ9P287 314 aaKnown RBP eCLIP13.6□□□□□ -0.23
PCSK9-202ENST00000490692 BRD1O95696 1058 aa13.6□□□□□ -0.23
PCSK9-202ENST00000490692 C8orf58Q8NAV2 365 aa13.6□□□□□ -0.23
PCSK9-202ENST00000490692 TSPYL4Q9UJ04 414 aa13.6□□□□□ -0.23
PCSK9-202ENST00000490692 CYP46A1Q9Y6A2 500 aa13.6□□□□□ -0.23
PCSK9-202ENST00000490692 ABCC11Q96J66 1382 aa13.6□□□□□ -0.23
PCSK9-202ENST00000490692 ATP7AQ04656 1500 aa13.6□□□□□ -0.23
PCSK9-202ENST00000490692 PDE1AP54750 535 aa13.6□□□□□ -0.23
PCSK9-202ENST00000490692 TYRO3Q06418 890 aa13.6□□□□□ -0.23
PCSK9-202ENST00000490692 RUFY2Q8WXA3 655 aa13.6□□□□□ -0.23
PCSK9-202ENST00000490692 NRBP1Q9UHY1 535 aa13.59□□□□□ -0.23
PCSK9-202ENST00000490692 SYT1P21579 422 aa13.59□□□□□ -0.23
PCSK9-202ENST00000490692 NFE2L2Q16236 605 aa13.59□□□□□ -0.23
PCSK9-202ENST00000490692 PRPF40BQ6NWY9 871 aaKnown RBP13.59□□□□□ -0.23
PCSK9-202ENST00000490692 MRPL50Q8N5N7 158 aaKnown RBP13.59□□□□□ -0.23
PCSK9-202ENST00000490692 AK7Q96M32 723 aa13.59□□□□□ -0.23
PCSK9-202ENST00000490692 ESYT1Q9BSJ8 1104 aa13.59□□□□□ -0.23
PCSK9-202ENST00000490692 ZSWIM4Q9H7M6 989 aa13.59□□□□□ -0.23
PCSK9-202ENST00000490692 ZNF215Q9UL58 517 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms