RNA–Protein interactions for RNA: ENST00000490552.1

USP34-218, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 2

Gene USP34, Length 1,793 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-218ENST00000490552 ERVV-2B6SEH9 535 aa12.1□□□□□ -0.47
USP34-218ENST00000490552 TSPYL6Q8N831 410 aa12.1□□□□□ -0.47
USP34-218ENST00000490552 SPATA31A5Q5VU36 1347 aa12.1□□□□□ -0.47
USP34-218ENST00000490552 SPATA31A7Q8IWB4 1347 aa12.1□□□□□ -0.47
USP34-218ENST00000490552 MRC1P22897 1456 aa12.1□□□□□ -0.47
USP34-218ENST00000490552 EXOC5O00471 708 aa12.09□□□□□ -0.47
USP34-218ENST00000490552 KDM6AO15550 1401 aaPredicted RBP12.09□□□□□ -0.47
USP34-218ENST00000490552 PLIN1O60240 522 aa12.09□□□□□ -0.47
USP34-218ENST00000490552 FRAT1Q92837 279 aaPredicted RBP12.09□□□□□ -0.47
USP34-218ENST00000490552 C8orf37Q96NL8 207 aa12.09□□□□□ -0.47
USP34-218ENST00000490552 MIS18AQ9NYP9 233 aa12.09□□□□□ -0.47
USP34-218ENST00000490552 SCN11AQ9UI33 1791 aa12.09□□□□□ -0.47
USP34-218ENST00000490552 ELL2O00472 640 aaPredicted RBP12.08□□□□□ -0.48
USP34-218ENST00000490552 VPS72Q15906 364 aa12.08□□□□□ -0.48
USP34-218ENST00000490552 CCDC30Q5VVM6 783 aa12.08□□□□□ -0.48
USP34-218ENST00000490552 CABP4P57796 275 aa12.07□□□□□ -0.48
USP34-218ENST00000490552 EIF4A1P60842 406 aaKnown RBP12.07□□□□□ -0.48
USP34-218ENST00000490552 MEX3CQ5U5Q3 659 aaKnown RBP12.07□□□□□ -0.48
USP34-218ENST00000490552 ATF7IPQ6VMQ6 1270 aa12.07□□□□□ -0.48
USP34-218ENST00000490552 PELP1Q8IZL8 1130 aaKnown RBP12.07□□□□□ -0.48
USP34-218ENST00000490552 BCL2L13Q9BXK5 485 aa12.07□□□□□ -0.48
USP34-218ENST00000490552 STK31Q9BXU1 1019 aa12.07□□□□□ -0.48
USP34-218ENST00000490552 KDM3BQ7LBC6 1761 aa12.07□□□□□ -0.48
USP34-218ENST00000490552 FTSJ3Q8IY81 847 aaKnown RBP12.07□□□□□ -0.48
USP34-218ENST00000490552 MRPL50Q8N5N7 158 aaKnown RBP12.07□□□□□ -0.48
USP34-218ENST00000490552 DDX54Q8TDD1 881 aaKnown RBP12.07□□□□□ -0.48
USP34-218ENST00000490552 CHMP4BQ9H444 224 aaKnown RBP12.07□□□□□ -0.48
USP34-218ENST00000490552 BCL9LQ86UU0 1499 aa12.06□□□□□ -0.48
USP34-218ENST00000490552 TNS2Q63HR2 1409 aa12.06□□□□□ -0.48
USP34-218ENST00000490552 SIPA1L3O60292 1781 aaPredicted RBP12.06□□□□□ -0.48
USP34-218ENST00000490552 PTPRCP08575 1304 aa12.06□□□□□ -0.48
USP34-218ENST00000490552 ZNF790Q6PG37 636 aa12.06□□□□□ -0.48
USP34-218ENST00000490552 DZIP1LQ8IYY4 767 aaKnown RBP12.06□□□□□ -0.48
USP34-218ENST00000490552 TTC5Q8N0Z6 440 aa12.06□□□□□ -0.48
USP34-218ENST00000490552 NFATC2IPQ8NCF5 419 aa12.06□□□□□ -0.48
USP34-218ENST00000490552 API5Q9BZZ5 524 aaKnown RBP12.06□□□□□ -0.48
USP34-218ENST00000490552 CCDC9Q9Y3X0 531 aaKnown RBP12.06□□□□□ -0.48
USP34-218ENST00000490552 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.06□□□□□ -0.48
USP34-218ENST00000490552 LRP6O75581 1613 aa12.06□□□□□ -0.48
USP34-218ENST00000490552 VIRMAQ69YN4 1812 aaKnown RBP12.05□□□□□ -0.48
USP34-218ENST00000490552 WNK3Q9BYP7 1800 aa12.05□□□□□ -0.48
USP34-218ENST00000490552 DDB1Q16531 1140 aa12.05□□□□□ -0.48
USP34-218ENST00000490552 USP21Q9UK80 565 aa12.05□□□□□ -0.48
USP34-218ENST00000490552 NOB1Q9ULX3 412 aaKnown RBP12.05□□□□□ -0.48
USP34-218ENST00000490552 HEG1Q9ULI3 1381 aa12.05□□□□□ -0.48
USP34-218ENST00000490552 TRIM27P14373 513 aa12.05□□□□□ -0.48
USP34-218ENST00000490552 KRT24Q2M2I5 525 aa12.04□□□□□ -0.48
USP34-218ENST00000490552 C20orf194Q5TEA3 1177 aa12.04□□□□□ -0.48
USP34-218ENST00000490552 EXOC6Q8TAG9 804 aa12.04□□□□□ -0.48
USP34-218ENST00000490552 CRBNQ96SW2 442 aa12.04□□□□□ -0.48
USP34-218ENST00000490552 SHANK3Q9BYB0 1731 aa12.04□□□□□ -0.48
USP34-218ENST00000490552 HDGFL1Q5TGJ6 251 aa12.03□□□□□ -0.48
USP34-218ENST00000490552 CCDC136Q96JN2 1154 aa12.03□□□□□ -0.48
USP34-218ENST00000490552 GIGYF1O75420 1035 aaPredicted RBP12.02□□□□□ -0.48
USP34-218ENST00000490552 SLC4A2P04920 1241 aa12.02□□□□□ -0.48
USP34-218ENST00000490552 FMNL2Q96PY5 1086 aa12.02□□□□□ -0.48
USP34-218ENST00000490552 TMOD3Q9NYL9 352 aa12.02□□□□□ -0.48
USP34-218ENST00000490552 DDX19BQ9UMR2 479 aa12.02□□□□□ -0.48
USP34-218ENST00000490552 MVPQ14764 893 aaKnown RBP12.02□□□□□ -0.49
USP34-218ENST00000490552 SNRPA1P09661 255 aaKnown RBP12.01□□□□□ -0.49
USP34-218ENST00000490552 PANK1Q8TE04 598 aa12.01□□□□□ -0.49
USP34-218ENST00000490552 DBF4Q9UBU7 674 aaPredicted RBP12.01□□□□□ -0.49
USP34-218ENST00000490552 TRPC5Q9UL62 973 aaPredicted RBP12.01□□□□□ -0.49
USP34-218ENST00000490552 CACNA1FO60840 1977 aa12.01□□□□□ -0.49
USP34-218ENST00000490552 CLUAP1Q96AJ1 413 aa12□□□□□ -0.49
USP34-218ENST00000490552 COG6Q9Y2V7 657 aa12□□□□□ -0.49
USP34-218ENST00000490552 ABCC4O15439 1325 aa12□□□□□ -0.49
USP34-218ENST00000490552 AFF2P51816 1311 aa12□□□□□ -0.49
USP34-218ENST00000490552 KCNQ3O43525 872 aa12□□□□□ -0.49
USP34-218ENST00000490552 RLBP1P12271 317 aa11.99□□□□□ -0.49
USP34-218ENST00000490552 GJD4Q96KN9 370 aaPredicted RBP11.99□□□□□ -0.49
USP34-218ENST00000490552 ERBB4Q15303 1308 aa11.99□□□□□ -0.49
USP34-218ENST00000490552 FLIIQ13045 1269 aa11.98□□□□□ -0.49
USP34-218ENST00000490552 SLC39A6Q13433 755 aa11.98□□□□□ -0.49
USP34-218ENST00000490552 FAM98CQ17RN3 349 aaKnown RBP11.98□□□□□ -0.49
USP34-218ENST00000490552 ITPRIPQ8IWB1 547 aa11.98□□□□□ -0.49
USP34-218ENST00000490552 VSIG10Q8N0Z9 540 aa11.98□□□□□ -0.49
USP34-218ENST00000490552 ZNF496Q96IT1 587 aaPredicted RBP11.98□□□□□ -0.49
USP34-218ENST00000490552 TEX13AQ9BXU3 409 aaPredicted RBP11.98□□□□□ -0.49
USP34-218ENST00000490552 HYPKQ9NX55 129 aa11.98□□□□□ -0.49
USP34-218ENST00000490552 ATRNO75882 1429 aa11.98□□□□□ -0.49
USP34-218ENST00000490552 TCERG1O14776 1098 aaKnown RBP11.97□□□□□ -0.49
USP34-218ENST00000490552 ONECUT3O60422 494 aaPredicted RBP11.97□□□□□ -0.49
USP34-218ENST00000490552 EIF2S2P20042 333 aaKnown RBP11.97□□□□□ -0.49
USP34-218ENST00000490552 CACNB1Q02641 598 aaPredicted RBP11.97□□□□□ -0.49
USP34-218ENST00000490552 INTS3Q68E01 1043 aaKnown RBP11.97□□□□□ -0.49
USP34-218ENST00000490552 BCL9O00512 1426 aa11.97□□□□□ -0.49
USP34-218ENST00000490552 CCT4P50991 539 aaKnown RBP11.97□□□□□ -0.49
USP34-218ENST00000490552 FKBP5Q13451 457 aaPredicted RBP11.97□□□□□ -0.49
USP34-218ENST00000490552 B4GALNT3Q6L9W6 998 aa11.97□□□□□ -0.49
USP34-218ENST00000490552 TMEM57Q8N5G2 664 aa11.97□□□□□ -0.49
USP34-218ENST00000490552 DDX21Q9NR30 783 aaKnown RBP eCLIP11.97□□□□□ -0.49
USP34-218ENST00000490552 PAPPAQ13219 1627 aa11.97□□□□□ -0.49
USP34-218ENST00000490552 PIGBQ92521 554 aa11.96□□□□□ -0.49
USP34-218ENST00000490552 TOGARAM1Q9Y4F4 1720 aa11.96□□□□□ -0.5
USP34-218ENST00000490552 UBR2Q8IWV8 1755 aa11.96□□□□□ -0.5
USP34-218ENST00000490552 DDX58O95786 925 aaKnown RBP11.95□□□□□ -0.5
USP34-218ENST00000490552 ZNF772Q68DY9 489 aaPredicted RBP11.95□□□□□ -0.5
USP34-218ENST00000490552 MARCH10Q8NA82 808 aaPredicted RBP11.95□□□□□ -0.5
USP34-218ENST00000490552 CHPF2Q9P2E5 772 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms