RNA–Protein interactions for RNA: ENST00000490322.1

SMYD3-215, Transcript of SET and MYND domain containing 3, human

TSL 3

Gene SMYD3, Length 368 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMYD3-215	ENST00000490322	MRPL14	Q6P1L8	145 aa	Known RBP	4.19	□□□□□ -1.74
SMYD3-215	ENST00000490322	KRTAP1-3	Q8IUG1	177 aa		4.19	□□□□□ -1.74
SMYD3-215	ENST00000490322	CCDC24	Q8N4L8	307 aa		4.19	□□□□□ -1.74
SMYD3-215	ENST00000490322	NFATC2IP	Q8NCF5	419 aa		4.19	□□□□□ -1.74
SMYD3-215	ENST00000490322	EHBP1	Q8NDI1	1231 aa		4.19	□□□□□ -1.74
SMYD3-215	ENST00000490322	UCN2	Q96RP3	112 aa		4.19	□□□□□ -1.74
SMYD3-215	ENST00000490322	NUP160	Q12769	1436 aa		4.19	□□□□□ -1.74
SMYD3-215	ENST00000490322	CROCC2	H7BZ55	1655 aa		4.19	□□□□□ -1.74
SMYD3-215	ENST00000490322	ADGB	Q8N7X0	1667 aa		4.19	□□□□□ -1.74
SMYD3-215	ENST00000490322	CDC42BPA	Q5VT25	1732 aa		4.18	□□□□□ -1.74
SMYD3-215	ENST00000490322	PTPN23	Q9H3S7	1636 aa		4.18	□□□□□ -1.74
SMYD3-215	ENST00000490322	EPRS	P07814	1512 aa	Known RBP	4.18	□□□□□ -1.74
SMYD3-215	ENST00000490322	CDK13	Q14004	1512 aa	Known RBP	4.18	□□□□□ -1.74
SMYD3-215	ENST00000490322	KANK4	Q5T7N3	995 aa	Predicted RBP	4.18	□□□□□ -1.74
SMYD3-215	ENST00000490322	PRR7	Q8TB68	274 aa		4.18	□□□□□ -1.74
SMYD3-215	ENST00000490322	LRRN4	Q8WUT4	740 aa		4.18	□□□□□ -1.74
SMYD3-215	ENST00000490322	PCDHGC3	Q9UN70	934 aa		4.18	□□□□□ -1.74
SMYD3-215	ENST00000490322	ZC3H4	Q9UPT8	1303 aa	Known RBP	4.18	□□□□□ -1.74
SMYD3-215	ENST00000490322	CCNB3	Q8WWL7	1395 aa		4.17	□□□□□ -1.74
SMYD3-215	ENST00000490322	MAGI3	Q5TCQ9	1506 aa		4.17	□□□□□ -1.74
SMYD3-215	ENST00000490322	CFAP99	D6REC4	459 aa		4.17	□□□□□ -1.74
SMYD3-215	ENST00000490322	PPFIA3	O75145	1194 aa		4.17	□□□□□ -1.74
SMYD3-215	ENST00000490322	NR1H3	Q13133	447 aa		4.17	□□□□□ -1.74
SMYD3-215	ENST00000490322	SCARF1	Q14162	830 aa		4.17	□□□□□ -1.74
SMYD3-215	ENST00000490322		Q3C1V9	767 aa		4.17	□□□□□ -1.74
SMYD3-215	ENST00000490322	ZNF385C	Q66K41	422 aa	Predicted RBP	4.17	□□□□□ -1.74
SMYD3-215	ENST00000490322	SVOP	Q8N4V2	548 aa		4.17	□□□□□ -1.74
SMYD3-215	ENST00000490322	CHMP7	Q8WUX9	453 aa	Predicted RBP	4.17	□□□□□ -1.74
SMYD3-215	ENST00000490322	ZNF428	Q96B54	188 aa		4.17	□□□□□ -1.74
SMYD3-215	ENST00000490322	CARMIL2	Q6F5E8	1435 aa		4.17	□□□□□ -1.74
SMYD3-215	ENST00000490322	ARHGEF11	O15085	1522 aa		4.16	□□□□□ -1.74
SMYD3-215	ENST00000490322	MTUS2	Q5JR59	1369 aa		4.16	□□□□□ -1.74
SMYD3-215	ENST00000490322	MYO5C	Q9NQX4	1742 aa		4.16	□□□□□ -1.74
SMYD3-215	ENST00000490322	ABCA8	O94911	1581 aa		4.16	□□□□□ -1.74
SMYD3-215	ENST00000490322	GUCA2A	Q02747	115 aa		4.16	□□□□□ -1.74
SMYD3-215	ENST00000490322	DESI1	Q6ICB0	168 aa		4.16	□□□□□ -1.74
SMYD3-215	ENST00000490322	TBC1D9	Q6ZT07	1266 aa		4.16	□□□□□ -1.74
SMYD3-215	ENST00000490322	RETREG3	Q86VR2	466 aa		4.16	□□□□□ -1.74
SMYD3-215	ENST00000490322	PLEKHM2	Q8IWE5	1019 aa		4.16	□□□□□ -1.74
SMYD3-215	ENST00000490322	CNTNAP3B	Q96NU0	1288 aa		4.16	□□□□□ -1.74
SMYD3-215	ENST00000490322	USB1	Q9BQ65	265 aa	Known RBP	4.16	□□□□□ -1.74
SMYD3-215	ENST00000490322	CNTNAP3	Q9BZ76	1288 aa		4.16	□□□□□ -1.74
SMYD3-215	ENST00000490322	BCL11A	Q9H165	835 aa		4.16	□□□□□ -1.74
SMYD3-215	ENST00000490322	TLL2	Q9Y6L7	1015 aa		4.16	□□□□□ -1.74
SMYD3-215	ENST00000490322	KIF14	Q15058	1648 aa		4.16	□□□□□ -1.74
SMYD3-215	ENST00000490322	NCOA2	Q15596	1464 aa		4.16	□□□□□ -1.74
SMYD3-215	ENST00000490322	CLASP1	Q7Z460	1538 aa		4.16	□□□□□ -1.74
SMYD3-215	ENST00000490322	PHLDB1	Q86UU1	1377 aa		4.15	□□□□□ -1.74
SMYD3-215	ENST00000490322	FGD6	Q6ZV73	1430 aa		4.15	□□□□□ -1.74
SMYD3-215	ENST00000490322	FAM196B	A6NMK8	535 aa		4.15	□□□□□ -1.75
SMYD3-215	ENST00000490322	ZBBX	A8MT70	800 aa		4.15	□□□□□ -1.75
SMYD3-215	ENST00000490322	MAN1A2	O60476	641 aa		4.15	□□□□□ -1.75
SMYD3-215	ENST00000490322	HMGB1	P09429	215 aa	Known RBP	4.15	□□□□□ -1.75
SMYD3-215	ENST00000490322	ARID4A	P29374	1257 aa	Predicted RBP	4.15	□□□□□ -1.75
SMYD3-215	ENST00000490322	MCCD1	P59942	119 aa	Predicted RBP	4.15	□□□□□ -1.75
SMYD3-215	ENST00000490322	NR6A1	Q15406	480 aa		4.15	□□□□□ -1.75
SMYD3-215	ENST00000490322	KANK3	Q6NY19	840 aa		4.15	□□□□□ -1.75
SMYD3-215	ENST00000490322	NOVA2	Q9UNW9	492 aa	Known RBP	4.15	□□□□□ -1.75
SMYD3-215	ENST00000490322	NUP153	P49790	1475 aa	Known RBP	4.15	□□□□□ -1.75
SMYD3-215	ENST00000490322	DNMT1	P26358	1616 aa	Known RBP	4.14	□□□□□ -1.75
SMYD3-215	ENST00000490322	PREX2	Q70Z35	1606 aa		4.14	□□□□□ -1.75
SMYD3-215	ENST00000490322	MYOM3	Q5VTT5	1437 aa		4.14	□□□□□ -1.75
SMYD3-215	ENST00000490322	RBM47	A0AV96	593 aa	Known RBP	4.14	□□□□□ -1.75
SMYD3-215	ENST00000490322	USP17L3	A6NCW0	530 aa		4.14	□□□□□ -1.75
SMYD3-215	ENST00000490322	USP17L4	A6NCW7	530 aa		4.14	□□□□□ -1.75
SMYD3-215	ENST00000490322	USP17L5	A8MUK1	530 aa		4.14	□□□□□ -1.75
SMYD3-215	ENST00000490322	LZTS3	O60299	673 aa	Predicted RBP	4.14	□□□□□ -1.75
SMYD3-215	ENST00000490322	NNT	Q13423	1086 aa		4.14	□□□□□ -1.75
SMYD3-215	ENST00000490322	CDCA8	Q53HL2	280 aa		4.14	□□□□□ -1.75
SMYD3-215	ENST00000490322	LARP1	Q6PKG0	1096 aa	Known RBP	4.14	□□□□□ -1.75
SMYD3-215	ENST00000490322	USP17L2	Q6R6M4	530 aa		4.14	□□□□□ -1.75
SMYD3-215	ENST00000490322	USP17L1	Q7RTZ2	530 aa		4.14	□□□□□ -1.75
SMYD3-215	ENST00000490322	GPR161	Q8N6U8	529 aa	Known RBP	4.14	□□□□□ -1.75
SMYD3-215	ENST00000490322	WHAMM	Q8TF30	809 aa		4.14	□□□□□ -1.75
SMYD3-215	ENST00000490322	CDC42BPB	Q9Y5S2	1711 aa		4.14	□□□□□ -1.75
SMYD3-215	ENST00000490322	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	4.14	□□□□□ -1.75
SMYD3-215	ENST00000490322	ZCCHC11	Q5TAX3	1644 aa	Known RBP	4.13	□□□□□ -1.75
SMYD3-215	ENST00000490322	TCOF1	Q13428	1488 aa	Known RBP	4.13	□□□□□ -1.75
SMYD3-215	ENST00000490322	PLB1	Q6P1J6	1458 aa		4.13	□□□□□ -1.75
SMYD3-215	ENST00000490322	CARNS1	A5YM72	827 aa		4.13	□□□□□ -1.75
SMYD3-215	ENST00000490322	USP17L15	C9J2P7	530 aa		4.13	□□□□□ -1.75
SMYD3-215	ENST00000490322	USP17L10	C9JJH3	530 aa		4.13	□□□□□ -1.75
SMYD3-215	ENST00000490322	USP17L13	C9JLJ4	530 aa		4.13	□□□□□ -1.75
SMYD3-215	ENST00000490322	USP17L12	C9JPN9	530 aa		4.13	□□□□□ -1.75
SMYD3-215	ENST00000490322	USP17L11	C9JVI0	530 aa		4.13	□□□□□ -1.75
SMYD3-215	ENST00000490322	USP17L21	D6R901	530 aa		4.13	□□□□□ -1.75
SMYD3-215	ENST00000490322	USP17L18	D6R9N7	530 aa		4.13	□□□□□ -1.75
SMYD3-215	ENST00000490322	USP17L22	D6RA61	530 aa		4.13	□□□□□ -1.75
SMYD3-215	ENST00000490322	USP17L17	D6RBQ6	530 aa		4.13	□□□□□ -1.75
SMYD3-215	ENST00000490322	USP17L19	D6RCP7	530 aa		4.13	□□□□□ -1.75
SMYD3-215	ENST00000490322	USP17L20	D6RJB6	530 aa		4.13	□□□□□ -1.75
SMYD3-215	ENST00000490322	ATP5J2-PTCD1	G3V325	749 aa		4.13	□□□□□ -1.75
SMYD3-215	ENST00000490322	MSTN	O14793	375 aa		4.13	□□□□□ -1.75
SMYD3-215	ENST00000490322	IGSF3	O75054	1194 aa		4.13	□□□□□ -1.75
SMYD3-215	ENST00000490322	ARHGEF15	O94989	841 aa		4.13	□□□□□ -1.75
SMYD3-215	ENST00000490322	SKI	P12755	728 aa		4.13	□□□□□ -1.75
SMYD3-215	ENST00000490322	TIMP2	P16035	220 aa		4.13	□□□□□ -1.75
SMYD3-215	ENST00000490322	WDR4	P57081	412 aa	Known RBP	4.13	□□□□□ -1.75
SMYD3-215	ENST00000490322	USP17L24	Q0WX57	530 aa		4.13	□□□□□ -1.75
SMYD3-215	ENST00000490322	TMEM164	Q5U3C3	297 aa		4.13	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms