RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 IFNL2Q8IZJ0 200 aa16.21■□□□□ 0.19
SRSF4-204ENST00000489898 ATG3Q9NT62 314 aa16.21■□□□□ 0.19
SRSF4-204ENST00000489898 KNSTRNQ9Y448 316 aa16.21■□□□□ 0.19
SRSF4-204ENST00000489898 BCORQ6W2J9 1755 aa16.21■□□□□ 0.18
SRSF4-204ENST00000489898 DLEC1Q9Y238 1755 aa16.21■□□□□ 0.18
SRSF4-204ENST00000489898 SMIM5Q71RC9 77 aa16.2■□□□□ 0.18
SRSF4-204ENST00000489898 SYT17Q9BSW7 474 aa16.2■□□□□ 0.18
SRSF4-204ENST00000489898 SLC16A10Q8TF71 515 aa16.19■□□□□ 0.18
SRSF4-204ENST00000489898 KDM3BQ7LBC6 1761 aa16.18■□□□□ 0.18
SRSF4-204ENST00000489898 LOC102724428A0A0B4J2F2 783 aa16.18■□□□□ 0.18
SRSF4-204ENST00000489898 MTHFSP49914 203 aa16.18■□□□□ 0.18
SRSF4-204ENST00000489898 SIK1P57059 783 aa16.18■□□□□ 0.18
SRSF4-204ENST00000489898 LAMB4A4D0S4 1761 aa16.18■□□□□ 0.18
SRSF4-204ENST00000489898 ARFGEF1Q9Y6D6 1849 aa16.17■□□□□ 0.18
SRSF4-204ENST00000489898 SULT6B1Q6IMI4 303 aa16.17■□□□□ 0.18
SRSF4-204ENST00000489898 ARXQ96QS3 562 aa16.17■□□□□ 0.18
SRSF4-204ENST00000489898 PPP1R1BQ9UD71 204 aaPredicted RBP16.17■□□□□ 0.18
SRSF4-204ENST00000489898 CC2D1BQ5T0F9 858 aaKnown RBP16.16■□□□□ 0.18
SRSF4-204ENST00000489898 ZNF530Q6P9A1 599 aaPredicted RBP16.16■□□□□ 0.18
SRSF4-204ENST00000489898 TMOD3Q9NYL9 352 aa16.16■□□□□ 0.18
SRSF4-204ENST00000489898 TFCP2L1Q9NZI6 479 aa16.16■□□□□ 0.18
SRSF4-204ENST00000489898 NLGN2Q8NFZ4 835 aa16.15■□□□□ 0.18
SRSF4-204ENST00000489898 SMARCC1Q92922 1105 aaPredicted RBP16.15■□□□□ 0.18
SRSF4-204ENST00000489898 DCAF5Q96JK2 942 aa16.15■□□□□ 0.18
SRSF4-204ENST00000489898 ANKRD31Q8N7Z5 1873 aa16.14■□□□□ 0.17
SRSF4-204ENST00000489898 ERVV-2B6SEH9 535 aa16.14■□□□□ 0.17
SRSF4-204ENST00000489898 MSL1Q68DK7 614 aa16.13■□□□□ 0.17
SRSF4-204ENST00000489898 C10orf71Q711Q0 1435 aa16.12■□□□□ 0.17
SRSF4-204ENST00000489898 COL11A2P13942 1736 aaPredicted RBP16.12■□□□□ 0.17
SRSF4-204ENST00000489898 AMOTQ4VCS5 1084 aa16.12■□□□□ 0.17
SRSF4-204ENST00000489898 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.11■□□□□ 0.17
SRSF4-204ENST00000489898 PLEKHO1Q53GL0 409 aaPredicted RBP16.11■□□□□ 0.17
SRSF4-204ENST00000489898 CNTNAP4Q9C0A0 1308 aa16.11■□□□□ 0.17
SRSF4-204ENST00000489898 PXDNLA1KZ92 1463 aa16.1■□□□□ 0.17
SRSF4-204ENST00000489898 HMOX1P09601 288 aa16.1■□□□□ 0.17
SRSF4-204ENST00000489898 SSFA2P28290 1259 aa16.1■□□□□ 0.17
SRSF4-204ENST00000489898 CEMIPQ8WUJ3 1361 aa16.1■□□□□ 0.17
SRSF4-204ENST00000489898 MTHFSDQ2M296 383 aaKnown RBP16.09■□□□□ 0.17
SRSF4-204ENST00000489898 LGR6Q9HBX8 967 aa16.09■□□□□ 0.17
SRSF4-204ENST00000489898 HSP90AB1P08238 724 aaKnown RBP16.08■□□□□ 0.16
SRSF4-204ENST00000489898 DIAPH1O60610 1272 aaKnown RBP16.07■□□□□ 0.16
SRSF4-204ENST00000489898 YBX3P16989 372 aaKnown RBP eCLIP16.07■□□□□ 0.16
SRSF4-204ENST00000489898 ATP6V1AP38606 617 aa16.07■□□□□ 0.16
SRSF4-204ENST00000489898 AKAP4Q5JQC9 854 aa16.07■□□□□ 0.16
SRSF4-204ENST00000489898 AK7Q96M32 723 aa16.07■□□□□ 0.16
SRSF4-204ENST00000489898 ARFGEF2Q9Y6D5 1785 aa16.07■□□□□ 0.16
SRSF4-204ENST00000489898 CEP350Q5VT06 3117 aa16.07■□□□□ 0.16
SRSF4-204ENST00000489898 GNPATO15228 680 aa16.06■□□□□ 0.16
SRSF4-204ENST00000489898 PHF14O94880 888 aa16.06■□□□□ 0.16
SRSF4-204ENST00000489898 NFATC2IPQ8NCF5 419 aa16.06■□□□□ 0.16
SRSF4-204ENST00000489898 RSPH6AQ9H0K4 717 aa16.06■□□□□ 0.16
SRSF4-204ENST00000489898 SLC52A2Q9HAB3 445 aa16.06■□□□□ 0.16
SRSF4-204ENST00000489898 SBF1O95248 1867 aa16.05■□□□□ 0.16
SRSF4-204ENST00000489898 ADCY9O60503 1353 aa16.05■□□□□ 0.16
SRSF4-204ENST00000489898 RNMTO43148 476 aaKnown RBP16.05■□□□□ 0.16
SRSF4-204ENST00000489898 PPP2R1AP30153 589 aa16.05■□□□□ 0.16
SRSF4-204ENST00000489898 CACNA1SQ13698 1873 aa16.05■□□□□ 0.16
SRSF4-204ENST00000489898 POLD1P28340 1107 aa16.04■□□□□ 0.16
SRSF4-204ENST00000489898 RC3H1Q5TC82 1133 aaKnown RBP16.04■□□□□ 0.16
SRSF4-204ENST00000489898 FLAD1Q8NFF5 587 aa16.04■□□□□ 0.16
SRSF4-204ENST00000489898 YY1P25490 414 aa16.03■□□□□ 0.16
SRSF4-204ENST00000489898 C1orf141Q5JVX7 400 aa16.03■□□□□ 0.16
SRSF4-204ENST00000489898 CABP4P57796 275 aa16.02■□□□□ 0.16
SRSF4-204ENST00000489898 INTS5Q6P9B9 1019 aaKnown RBP16.02■□□□□ 0.16
SRSF4-204ENST00000489898 PHACTR3Q96KR7 559 aa16.02■□□□□ 0.16
SRSF4-204ENST00000489898 GYS1P13807 737 aa16.01■□□□□ 0.15
SRSF4-204ENST00000489898 CRKLP46109 303 aaKnown RBP16.01■□□□□ 0.15
SRSF4-204ENST00000489898 SLC39A6Q13433 755 aa16.01■□□□□ 0.15
SRSF4-204ENST00000489898 IL17REQ8NFR9 667 aa16.01■□□□□ 0.15
SRSF4-204ENST00000489898 SOS1Q07889 1333 aaPredicted RBP16■□□□□ 0.15
SRSF4-204ENST00000489898 USP42Q9H9J4 1324 aaKnown RBP16■□□□□ 0.15
SRSF4-204ENST00000489898 PTCD1O75127 700 aaKnown RBP16■□□□□ 0.15
SRSF4-204ENST00000489898 RPS6KA4O75676 772 aa16■□□□□ 0.15
SRSF4-204ENST00000489898 DNAJC10Q8IXB1 793 aa16■□□□□ 0.15
SRSF4-204ENST00000489898 RBM42Q9BTD8 480 aaKnown RBP16■□□□□ 0.15
SRSF4-204ENST00000489898 CD2APQ9Y5K6 639 aa16■□□□□ 0.15
SRSF4-204ENST00000489898 TIAM2Q8IVF5 1701 aa15.99■□□□□ 0.15
SRSF4-204ENST00000489898 ADRA2BP18089 450 aa15.99■□□□□ 0.15
SRSF4-204ENST00000489898 ARHGEF1Q92888 912 aaKnown RBP15.99■□□□□ 0.15
SRSF4-204ENST00000489898 CCDC88AQ3V6T2 1871 aa15.99■□□□□ 0.15
SRSF4-204ENST00000489898 MSH5O43196 834 aa15.98■□□□□ 0.15
SRSF4-204ENST00000489898 DDR1Q08345 913 aa15.98■□□□□ 0.15
SRSF4-204ENST00000489898 COL15A1P39059 1388 aa15.98■□□□□ 0.15
SRSF4-204ENST00000489898 NUP98P52948 1817 aa15.97■□□□□ 0.15
SRSF4-204ENST00000489898 MMP10P09238 476 aa15.97■□□□□ 0.15
SRSF4-204ENST00000489898 CYP19A1P11511 503 aaPredicted RBP15.97■□□□□ 0.15
SRSF4-204ENST00000489898 PRKAR2BP31323 418 aa15.97■□□□□ 0.15
SRSF4-204ENST00000489898 CNGB1Q14028 1251 aaPredicted RBP15.97■□□□□ 0.15
SRSF4-204ENST00000489898 ZNF784Q8NCA9 323 aaPredicted RBP15.97■□□□□ 0.15
SRSF4-204ENST00000489898 SRP68Q9UHB9 627 aaKnown RBP15.97■□□□□ 0.15
SRSF4-204ENST00000489898 TNRC6CQ9HCJ0 1690 aaKnown RBP15.97■□□□□ 0.15
SRSF4-204ENST00000489898 KLHL34Q8N239 644 aa15.96■□□□□ 0.15
SRSF4-204ENST00000489898 BCL2L12Q9HB09 334 aa15.96■□□□□ 0.15
SRSF4-204ENST00000489898 ZBTB1Q9Y2K1 713 aa15.96■□□□□ 0.15
SRSF4-204ENST00000489898 RTCBQ9Y3I0 505 aaKnown RBP15.96■□□□□ 0.15
SRSF4-204ENST00000489898 HEG1Q9ULI3 1381 aa15.96■□□□□ 0.15
SRSF4-204ENST00000489898 ANKRD36CQ5JPF3 1778 aa15.95■□□□□ 0.14
SRSF4-204ENST00000489898 FER1L6Q2WGJ9 1857 aa15.95■□□□□ 0.14
SRSF4-204ENST00000489898 U2SURPO15042 1029 aaKnown RBP15.95■□□□□ 0.14
SRSF4-204ENST00000489898 CARMIL3Q8ND23 1372 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms