RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 SLC4A2P04920 1241 aa23.75■■□□□ 1.39
HMG20B-213ENST00000488973 CEBPAP49715 358 aaPredicted RBP23.75■■□□□ 1.39
HMG20B-213ENST00000488973 NEK4P51957 841 aa23.75■■□□□ 1.39
HMG20B-213ENST00000488973 ZKSCAN5Q9Y2L8 839 aa23.75■■□□□ 1.39
HMG20B-213ENST00000488973 CCT4P50991 539 aaKnown RBP23.75■■□□□ 1.39
HMG20B-213ENST00000488973 CUL4AQ13619 759 aa23.75■■□□□ 1.39
HMG20B-213ENST00000488973 CRB1P82279 1406 aa23.75■■□□□ 1.39
HMG20B-213ENST00000488973 MAP7D2Q96T17 732 aa23.74■■□□□ 1.39
HMG20B-213ENST00000488973 PLEKHG1Q9ULL1 1385 aa23.74■■□□□ 1.39
HMG20B-213ENST00000488973 SYCE3A1L190 88 aa23.74■■□□□ 1.39
HMG20B-213ENST00000488973 BRD1O95696 1058 aa23.74■■□□□ 1.39
HMG20B-213ENST00000488973 SMAP1Q8IYB5 467 aaPredicted RBP23.73■■□□□ 1.39
HMG20B-213ENST00000488973 SALL3Q9BXA9 1300 aa23.73■■□□□ 1.39
HMG20B-213ENST00000488973 MCCP23508 829 aa23.73■■□□□ 1.39
HMG20B-213ENST00000488973 ANAPC15P60006 121 aa23.73■■□□□ 1.39
HMG20B-213ENST00000488973 INTS4Q96HW7 963 aaKnown RBP23.73■■□□□ 1.39
HMG20B-213ENST00000488973 ESYT1Q9BSJ8 1104 aa23.73■■□□□ 1.39
HMG20B-213ENST00000488973 NCKAP5LQ9HCH0 1330 aa23.72■■□□□ 1.39
HMG20B-213ENST00000488973 CSPP1Q1MSJ5 1256 aa23.72■■□□□ 1.39
HMG20B-213ENST00000488973 CCDC39Q9UFE4 941 aa23.72■■□□□ 1.39
HMG20B-213ENST00000488973 NSFL1CQ9UNZ2 370 aaKnown RBP23.72■■□□□ 1.39
HMG20B-213ENST00000488973 FER1L4A9Z1Z3 1794 aa23.72■■□□□ 1.39
HMG20B-213ENST00000488973 NALCNQ8IZF0 1738 aa23.72■■□□□ 1.39
HMG20B-213ENST00000488973 ADAMTS13Q76LX8 1427 aa23.72■■□□□ 1.39
HMG20B-213ENST00000488973 TXNDC2Q86VQ3 553 aa23.71■■□□□ 1.39
HMG20B-213ENST00000488973 SLIT1O75093 1534 aa23.71■■□□□ 1.39
HMG20B-213ENST00000488973 ARHGAP23Q9P227 1491 aa23.71■■□□□ 1.39
HMG20B-213ENST00000488973 SSH2Q76I76 1423 aa23.7■■□□□ 1.39
HMG20B-213ENST00000488973 GNAI2P04899 355 aa23.7■■□□□ 1.38
HMG20B-213ENST00000488973 IL17RAQ96F46 866 aa23.7■■□□□ 1.38
HMG20B-213ENST00000488973 R3HCC1Q9Y3T6 440 aaKnown RBP23.7■■□□□ 1.38
HMG20B-213ENST00000488973 PEAK1Q9H792 1746 aa23.7■■□□□ 1.38
HMG20B-213ENST00000488973 BBXQ8WY36 941 aaPredicted RBP23.7■■□□□ 1.38
HMG20B-213ENST00000488973 CACNA1FO60840 1977 aa23.69■■□□□ 1.38
HMG20B-213ENST00000488973 CHAMP1Q96JM3 812 aa23.69■■□□□ 1.38
HMG20B-213ENST00000488973 LTKP29376 864 aa23.69■■□□□ 1.38
HMG20B-213ENST00000488973 ARHGEF10O15013 1369 aa23.68■■□□□ 1.38
HMG20B-213ENST00000488973 OVOS2A0A0J9YW53 1432 aa23.68■■□□□ 1.38
HMG20B-213ENST00000488973 OVOS2Q6IE36 1432 aa23.68■■□□□ 1.38
HMG20B-213ENST00000488973 XPCQ01831 940 aaPredicted RBP23.68■■□□□ 1.38
HMG20B-213ENST00000488973 SLC4A10Q6U841 1118 aa23.68■■□□□ 1.38
HMG20B-213ENST00000488973 SYAP1Q96A49 352 aaPredicted RBP23.68■■□□□ 1.38
HMG20B-213ENST00000488973 LRRCC1Q9C099 1032 aa23.68■■□□□ 1.38
HMG20B-213ENST00000488973 G2E3Q7L622 706 aa23.67■■□□□ 1.38
HMG20B-213ENST00000488973 FMN2Q9NZ56 1722 aa23.66■■□□□ 1.38
HMG20B-213ENST00000488973 TTC21BQ7Z4L5 1316 aa23.66■■□□□ 1.38
HMG20B-213ENST00000488973 PRR36Q9H6K5 1346 aa23.66■■□□□ 1.38
HMG20B-213ENST00000488973 N4BP2Q86UW6 1770 aaPredicted RBP23.66■■□□□ 1.38
HMG20B-213ENST00000488973 MX1P20591 662 aa23.66■■□□□ 1.38
HMG20B-213ENST00000488973 FOXD4L5Q5VV16 416 aaPredicted RBP23.66■■□□□ 1.38
HMG20B-213ENST00000488973 FOXD4L4Q8WXT5 416 aaPredicted RBP23.66■■□□□ 1.38
HMG20B-213ENST00000488973 EXOC6BQ9Y2D4 811 aa23.66■■□□□ 1.38
HMG20B-213ENST00000488973 EID1Q9Y6B2 187 aa23.66■■□□□ 1.38
HMG20B-213ENST00000488973 TOPAZ1Q8N9V7 1692 aa23.66■■□□□ 1.38
HMG20B-213ENST00000488973 F6X3S4 739 aa23.65■■□□□ 1.38
HMG20B-213ENST00000488973 CHMLP26374 656 aa23.65■■□□□ 1.38
HMG20B-213ENST00000488973 NAP1L2Q9ULW6 460 aaPredicted RBP23.65■■□□□ 1.38
HMG20B-213ENST00000488973 TSPY26PQ9H489 355 aa23.65■■□□□ 1.38
HMG20B-213ENST00000488973 PALD1Q9ULE6 856 aa23.65■■□□□ 1.38
HMG20B-213ENST00000488973 XRN1Q8IZH2 1706 aaKnown RBP23.65■■□□□ 1.38
HMG20B-213ENST00000488973 TCHHQ07283 1943 aa23.65■■□□□ 1.38
HMG20B-213ENST00000488973 EPB41L2O43491 1005 aaKnown RBP23.64■■□□□ 1.38
HMG20B-213ENST00000488973 SRCIN1Q9C0H9 1055 aa23.64■■□□□ 1.37
HMG20B-213ENST00000488973 STAP2Q9UGK3 403 aa23.64■■□□□ 1.37
HMG20B-213ENST00000488973 TSPYL4Q9UJ04 414 aa23.64■■□□□ 1.37
HMG20B-213ENST00000488973 GTF2E1P29083 439 aaPredicted RBP23.63■■□□□ 1.37
HMG20B-213ENST00000488973 THEMISQ8N1K5 641 aaPredicted RBP23.63■■□□□ 1.37
HMG20B-213ENST00000488973 FAM208AQ9UK61 1670 aaKnown RBP23.63■■□□□ 1.37
HMG20B-213ENST00000488973 GNAI3P08754 354 aa23.63■■□□□ 1.37
HMG20B-213ENST00000488973 HSP90AB2PQ58FF8 381 aa23.63■■□□□ 1.37
HMG20B-213ENST00000488973 PHF14O94880 888 aa23.62■■□□□ 1.37
HMG20B-213ENST00000488973 ANO2Q9NQ90 1003 aa23.62■■□□□ 1.37
HMG20B-213ENST00000488973 MIS18AQ9NYP9 233 aa23.62■■□□□ 1.37
HMG20B-213ENST00000488973 ATP8B2P98198 1209 aa23.62■■□□□ 1.37
HMG20B-213ENST00000488973 USP31Q70CQ4 1352 aa23.62■■□□□ 1.37
HMG20B-213ENST00000488973 TSHZ3Q63HK5 1081 aa23.61■■□□□ 1.37
HMG20B-213ENST00000488973 RTF1Q92541 710 aaKnown RBP23.61■■□□□ 1.37
HMG20B-213ENST00000488973 DNAJC5Q9H3Z4 198 aa23.61■■□□□ 1.37
HMG20B-213ENST00000488973 UQCRHLA0A096LP55 91 aa23.61■■□□□ 1.37
HMG20B-213ENST00000488973 UQCRHP07919 91 aa23.61■■□□□ 1.37
HMG20B-213ENST00000488973 RNF214Q8ND24 703 aa23.61■■□□□ 1.37
HMG20B-213ENST00000488973 STK31Q9BXU1 1019 aa23.6■■□□□ 1.37
HMG20B-213ENST00000488973 AOX1Q06278 1338 aa23.6■■□□□ 1.37
HMG20B-213ENST00000488973 RIMS1Q86UR5 1692 aaKnown RBP23.6■■□□□ 1.37
HMG20B-213ENST00000488973 TRIM6-TRIM34B2RNG4 842 aa23.6■■□□□ 1.37
HMG20B-213ENST00000488973 RILPL2Q969X0 211 aa23.6■■□□□ 1.37
HMG20B-213ENST00000488973 WDR33Q9C0J8 1336 aaKnown RBP23.6■■□□□ 1.37
HMG20B-213ENST00000488973 ROBO2Q9HCK4 1378 aa23.6■■□□□ 1.37
HMG20B-213ENST00000488973 DYNC1I1O14576 645 aa23.59■■□□□ 1.37
HMG20B-213ENST00000488973 UTP14CQ5TAP6 766 aaKnown RBP23.59■■□□□ 1.37
HMG20B-213ENST00000488973 MTHFSDQ2M296 383 aaKnown RBP23.59■■□□□ 1.37
HMG20B-213ENST00000488973 TBX22Q9Y458 520 aa23.59■■□□□ 1.37
HMG20B-213ENST00000488973 SASS6Q6UVJ0 657 aa23.58■■□□□ 1.37
HMG20B-213ENST00000488973 USP6P35125 1406 aa23.58■■□□□ 1.36
HMG20B-213ENST00000488973 ACEP12821 1306 aa23.58■■□□□ 1.36
HMG20B-213ENST00000488973 MAP3K19Q56UN5 1328 aa23.58■■□□□ 1.36
HMG20B-213ENST00000488973 PNMA6EA0A0J9YXQ4 647 aa23.58■■□□□ 1.36
HMG20B-213ENST00000488973 FAM184AQ8NB25 1140 aa23.58■■□□□ 1.36
HMG20B-213ENST00000488973 PLEKHG3A1L390 1219 aa23.57■■□□□ 1.36
HMG20B-213ENST00000488973 UVSSAQ2YD98 709 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms