RNA–Protein interactions for RNA: ENST00000488144.5

LCLAT1-210, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 3

Gene LCLAT1, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-210ENST00000488144 NFAT5O94916 1531 aa9.94□□□□□ -0.82
LCLAT1-210ENST00000488144 HMGB2P26583 209 aaKnown RBP9.94□□□□□ -0.82
LCLAT1-210ENST00000488144 HOXD11P31277 338 aaPredicted RBP9.94□□□□□ -0.82
LCLAT1-210ENST00000488144 DEFB115Q30KQ5 88 aa9.94□□□□□ -0.82
LCLAT1-210ENST00000488144 CDK19Q9BWU1 502 aa9.94□□□□□ -0.82
LCLAT1-210ENST00000488144 PITPNM2Q9BZ72 1349 aa9.93□□□□□ -0.82
LCLAT1-210ENST00000488144 SOX12O15370 315 aa9.93□□□□□ -0.82
LCLAT1-210ENST00000488144 SSFA2P28290 1259 aa9.93□□□□□ -0.82
LCLAT1-210ENST00000488144 ITGAEP38570 1179 aa9.93□□□□□ -0.82
LCLAT1-210ENST00000488144 FXR1P51114 621 aaKnown RBP eCLIP9.93□□□□□ -0.82
LCLAT1-210ENST00000488144 LMNB1P20700 586 aa9.92□□□□□ -0.82
LCLAT1-210ENST00000488144 NBPF15Q8N660 670 aa9.92□□□□□ -0.82
LCLAT1-210ENST00000488144 CCDC87Q9NVE4 849 aa9.92□□□□□ -0.82
LCLAT1-210ENST00000488144 KCNH5Q8NCM2 988 aa9.91□□□□□ -0.82
LCLAT1-210ENST00000488144 SLC4A1APQ9BWU0 796 aaKnown RBP9.91□□□□□ -0.82
LCLAT1-210ENST00000488144 SZT2Q5T011 3432 aa9.91□□□□□ -0.82
LCLAT1-210ENST00000488144 PALLDQ8WX93 1383 aa9.9□□□□□ -0.82
LCLAT1-210ENST00000488144 SLC17A8Q8NDX2 589 aa9.9□□□□□ -0.82
LCLAT1-210ENST00000488144 ITGBL1O95965 494 aaPredicted RBP9.89□□□□□ -0.83
LCLAT1-210ENST00000488144 DPY19L2Q6NUT2 758 aa9.89□□□□□ -0.83
LCLAT1-210ENST00000488144 LDHDQ86WU2 507 aa9.88□□□□□ -0.83
LCLAT1-210ENST00000488144 ABT1Q9ULW3 272 aaKnown RBP9.88□□□□□ -0.83
LCLAT1-210ENST00000488144 LTN1O94822 1766 aa9.88□□□□□ -0.83
LCLAT1-210ENST00000488144 CAPNS2Q96L46 248 aa9.87□□□□□ -0.83
LCLAT1-210ENST00000488144 COL6A3P12111 3177 aa9.87□□□□□ -0.83
LCLAT1-210ENST00000488144 FAM208AQ9UK61 1670 aaKnown RBP9.87□□□□□ -0.83
LCLAT1-210ENST00000488144 DICER1Q9UPY3 1922 aaKnown RBP9.86□□□□□ -0.83
LCLAT1-210ENST00000488144 CA12O43570 354 aa9.86□□□□□ -0.83
LCLAT1-210ENST00000488144 NLGN1Q8N2Q7 840 aa9.86□□□□□ -0.83
LCLAT1-210ENST00000488144 ANKRD24Q8TF21 1146 aa9.86□□□□□ -0.83
LCLAT1-210ENST00000488144 GPR101Q96P66 508 aaPredicted RBP9.86□□□□□ -0.83
LCLAT1-210ENST00000488144 MAP2P11137 1827 aaKnown RBP9.85□□□□□ -0.83
LCLAT1-210ENST00000488144 GNPATO15228 680 aa9.85□□□□□ -0.83
LCLAT1-210ENST00000488144 CHRNA5P30532 468 aa9.85□□□□□ -0.83
LCLAT1-210ENST00000488144 ECE1P42892 770 aa9.85□□□□□ -0.83
LCLAT1-210ENST00000488144 GRM1Q13255 1194 aa9.85□□□□□ -0.83
LCLAT1-210ENST00000488144 PAXIP1Q6ZW49 1069 aaPredicted RBP9.85□□□□□ -0.83
LCLAT1-210ENST00000488144 CNKSR2Q8WXI2 1034 aa9.85□□□□□ -0.83
LCLAT1-210ENST00000488144 PARP3Q9Y6F1 533 aa9.85□□□□□ -0.83
LCLAT1-210ENST00000488144 ADAMTSL1Q8N6G6 1762 aa9.85□□□□□ -0.83
LCLAT1-210ENST00000488144 MKI67P46013 3256 aaKnown RBP9.85□□□□□ -0.83
LCLAT1-210ENST00000488144 SCN4AP35499 1836 aa9.84□□□□□ -0.83
LCLAT1-210ENST00000488144 LOC105371045A0A1W2PR82 267 aa9.84□□□□□ -0.83
LCLAT1-210ENST00000488144 TMF1P82094 1093 aa9.84□□□□□ -0.83
LCLAT1-210ENST00000488144 CYP4F22Q6NT55 531 aa9.84□□□□□ -0.83
LCLAT1-210ENST00000488144 LINC00116Q8NCU8 138 aa9.84□□□□□ -0.83
LCLAT1-210ENST00000488144 DLEC1Q9Y238 1755 aa9.83□□□□□ -0.84
LCLAT1-210ENST00000488144 ITGB4P16144 1822 aa9.82□□□□□ -0.84
LCLAT1-210ENST00000488144 IQCA1LA6NCM1 817 aa9.82□□□□□ -0.84
LCLAT1-210ENST00000488144 ZCRB1Q8TBF4 217 aaKnown RBP9.82□□□□□ -0.84
LCLAT1-210ENST00000488144 RNF39Q9H2S5 420 aa9.82□□□□□ -0.84
LCLAT1-210ENST00000488144 NFKBIEO00221 500 aa9.81□□□□□ -0.84
LCLAT1-210ENST00000488144 AOC2O75106 756 aa9.81□□□□□ -0.84
LCLAT1-210ENST00000488144 DDNO94850 711 aaPredicted RBP9.81□□□□□ -0.84
LCLAT1-210ENST00000488144 MAP2K2P36507 400 aa9.81□□□□□ -0.84
LCLAT1-210ENST00000488144 TAF1DQ9H5J8 278 aaPredicted RBP9.81□□□□□ -0.84
LCLAT1-210ENST00000488144 RNF216Q9NWF9 866 aaPredicted RBP9.81□□□□□ -0.84
LCLAT1-210ENST00000488144 MEGF6O75095 1541 aa9.81□□□□□ -0.84
LCLAT1-210ENST00000488144 GYS1P13807 737 aa9.8□□□□□ -0.84
LCLAT1-210ENST00000488144 SRPK2P78362 688 aaKnown RBP9.8□□□□□ -0.84
LCLAT1-210ENST00000488144 ERFEQ4G0M1 354 aa9.8□□□□□ -0.84
LCLAT1-210ENST00000488144 EAPPQ56P03 285 aaPredicted RBP9.8□□□□□ -0.84
LCLAT1-210ENST00000488144 MPRIPQ6WCQ1 1025 aa9.8□□□□□ -0.84
LCLAT1-210ENST00000488144 SMARCC1Q92922 1105 aaPredicted RBP9.8□□□□□ -0.84
LCLAT1-210ENST00000488144 NBPF1Q3BBV0 1214 aa9.79□□□□□ -0.84
LCLAT1-210ENST00000488144 CNTROBQ8N137 903 aa9.79□□□□□ -0.84
LCLAT1-210ENST00000488144 CABP1Q9NZU7 370 aa9.79□□□□□ -0.84
LCLAT1-210ENST00000488144 CLEC11AQ9Y240 323 aa9.79□□□□□ -0.84
LCLAT1-210ENST00000488144 TTC21BQ7Z4L5 1316 aa9.79□□□□□ -0.84
LCLAT1-210ENST00000488144 BRPF1P55201 1214 aaPredicted RBP9.78□□□□□ -0.84
LCLAT1-210ENST00000488144 TRAPPC3LQ5T215 181 aa9.78□□□□□ -0.84
LCLAT1-210ENST00000488144 MAP1SQ66K74 1059 aaPredicted RBP9.78□□□□□ -0.84
LCLAT1-210ENST00000488144 CABP2Q9NPB3 220 aa9.78□□□□□ -0.84
LCLAT1-210ENST00000488144 RGPD2P0DJD1 1756 aa9.78□□□□□ -0.84
LCLAT1-210ENST00000488144 FER1L6Q2WGJ9 1857 aa9.77□□□□□ -0.85
LCLAT1-210ENST00000488144 TRPM7Q96QT4 1865 aa9.77□□□□□ -0.85
LCLAT1-210ENST00000488144 LOC102724428A0A0B4J2F2 783 aa9.77□□□□□ -0.85
LCLAT1-210ENST00000488144 MNX1P50219 401 aaPredicted RBP9.77□□□□□ -0.85
LCLAT1-210ENST00000488144 SIK1P57059 783 aa9.77□□□□□ -0.85
LCLAT1-210ENST00000488144 ITPK1Q13572 414 aa9.77□□□□□ -0.85
LCLAT1-210ENST00000488144 L3MBTL3Q96JM7 780 aaPredicted RBP9.77□□□□□ -0.85
LCLAT1-210ENST00000488144 DDX21Q9NR30 783 aaKnown RBP eCLIP9.77□□□□□ -0.85
LCLAT1-210ENST00000488144 TTC21AQ8NDW8 1320 aa9.77□□□□□ -0.85
LCLAT1-210ENST00000488144 RTCBQ9Y3I0 505 aaKnown RBP9.76□□□□□ -0.85
LCLAT1-210ENST00000488144 DDR1Q08345 913 aa9.75□□□□□ -0.85
LCLAT1-210ENST00000488144 MPNDQ8N594 471 aa9.75□□□□□ -0.85
LCLAT1-210ENST00000488144 ARHGEF1Q92888 912 aaKnown RBP9.75□□□□□ -0.85
LCLAT1-210ENST00000488144 TRIOBPQ9H2D6 2365 aa9.75□□□□□ -0.85
LCLAT1-210ENST00000488144 UNC80Q8N2C7 3258 aa9.74□□□□□ -0.85
LCLAT1-210ENST00000488144 CIAPIN1Q6FI81 312 aa9.74□□□□□ -0.85
LCLAT1-210ENST00000488144 LTV1Q96GA3 475 aaPredicted RBP9.74□□□□□ -0.85
LCLAT1-210ENST00000488144 HPS5Q9UPZ3 1129 aa9.74□□□□□ -0.85
LCLAT1-210ENST00000488144 COLQQ9Y215 455 aaPredicted RBP9.74□□□□□ -0.85
LCLAT1-210ENST00000488144 TLL2Q9Y6L7 1015 aa9.74□□□□□ -0.85
LCLAT1-210ENST00000488144 EPHX2P34913 555 aa9.73□□□□□ -0.85
LCLAT1-210ENST00000488144 RFC4P35249 363 aa9.73□□□□□ -0.85
LCLAT1-210ENST00000488144 TTLL6Q8N841 843 aa9.73□□□□□ -0.85
LCLAT1-210ENST00000488144 COL5A3P25940 1745 aaPredicted RBP9.73□□□□□ -0.85
LCLAT1-210ENST00000488144 ATP6V1AP38606 617 aa9.72□□□□□ -0.85
LCLAT1-210ENST00000488144 FMR1Q06787 632 aaKnown RBP eCLIP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms