RNA–Protein interactions for RNA: ENST00000487002.1

FDPS-212, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 2,017 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-212ENST00000487002 NBPF4Q96M43 638 aa21.01■□□□□ 0.95
FDPS-212ENST00000487002 BCL11AQ9H165 835 aa21.01■□□□□ 0.95
FDPS-212ENST00000487002 CHMP5Q9NZZ3 219 aa21.01■□□□□ 0.95
FDPS-212ENST00000487002 RBM33Q96EV2 1170 aaKnown RBP21■□□□□ 0.95
FDPS-212ENST00000487002 KIF2CQ99661 725 aa20.99■□□□□ 0.95
FDPS-212ENST00000487002 TUBGCP6Q96RT7 1819 aa20.99■□□□□ 0.95
FDPS-212ENST00000487002 AMOTQ4VCS5 1084 aa20.98■□□□□ 0.95
FDPS-212ENST00000487002 ARHGEF25Q86VW2 580 aa20.98■□□□□ 0.95
FDPS-212ENST00000487002 OSBPL3Q9H4L5 887 aa20.98■□□□□ 0.95
FDPS-212ENST00000487002 ALS2Q96Q42 1657 aa20.98■□□□□ 0.95
FDPS-212ENST00000487002 AKAP4Q5JQC9 854 aa20.97■□□□□ 0.95
FDPS-212ENST00000487002 HDGFL1Q5TGJ6 251 aa20.97■□□□□ 0.95
FDPS-212ENST00000487002 GCP02774 474 aa20.97■□□□□ 0.95
FDPS-212ENST00000487002 ADAMTS7Q9UKP4 1686 aa20.96■□□□□ 0.95
FDPS-212ENST00000487002 PLEKHO1Q53GL0 409 aaPredicted RBP20.96■□□□□ 0.95
FDPS-212ENST00000487002 CASC1Q6TDU7 716 aa20.96■□□□□ 0.95
FDPS-212ENST00000487002 C16orf71Q8IYS4 520 aaPredicted RBP20.96■□□□□ 0.95
FDPS-212ENST00000487002 ORAI2Q96SN7 254 aa20.95■□□□□ 0.94
FDPS-212ENST00000487002 C1orf167Q5SNV9 1468 aa20.95■□□□□ 0.94
FDPS-212ENST00000487002 SIPA1L3O60292 1781 aaPredicted RBP20.95■□□□□ 0.94
FDPS-212ENST00000487002 DDIT3P35638 169 aa20.95■□□□□ 0.94
FDPS-212ENST00000487002 EIF4A1P60842 406 aaKnown RBP20.94■□□□□ 0.94
FDPS-212ENST00000487002 OTUD7AQ8TE49 926 aaPredicted RBP20.94■□□□□ 0.94
FDPS-212ENST00000487002 CIZ1Q9ULV3 898 aaPredicted RBP20.94■□□□□ 0.94
FDPS-212ENST00000487002 ATP8B2P98198 1209 aa20.94■□□□□ 0.94
FDPS-212ENST00000487002 SMARCA5O60264 1052 aaPredicted RBP20.93■□□□□ 0.94
FDPS-212ENST00000487002 SDSP20132 328 aa20.93■□□□□ 0.94
FDPS-212ENST00000487002 ZNF530Q6P9A1 599 aaPredicted RBP20.93■□□□□ 0.94
FDPS-212ENST00000487002 PXDNQ92626 1479 aa20.92■□□□□ 0.94
FDPS-212ENST00000487002 IBTKQ9P2D0 1353 aaPredicted RBP20.92■□□□□ 0.94
FDPS-212ENST00000487002 DCCP43146 1447 aa20.92■□□□□ 0.94
FDPS-212ENST00000487002 HSP90AB1P08238 724 aaKnown RBP20.92■□□□□ 0.94
FDPS-212ENST00000487002 ABCC6O95255 1503 aa20.91■□□□□ 0.94
FDPS-212ENST00000487002 TEFQ10587 303 aa20.91■□□□□ 0.94
FDPS-212ENST00000487002 SPRYD3Q8NCJ5 442 aa20.91■□□□□ 0.94
FDPS-212ENST00000487002 NECTIN2Q92692 538 aa20.91■□□□□ 0.94
FDPS-212ENST00000487002 LRRC59Q96AG4 307 aaKnown RBP20.91■□□□□ 0.94
FDPS-212ENST00000487002 SALL3Q9BXA9 1300 aa20.91■□□□□ 0.94
FDPS-212ENST00000487002 RABEP1Q15276 862 aa20.9■□□□□ 0.94
FDPS-212ENST00000487002 PROSER2Q86WR7 435 aaPredicted RBP20.9■□□□□ 0.94
FDPS-212ENST00000487002 LRRCC1Q9C099 1032 aa20.9■□□□□ 0.94
FDPS-212ENST00000487002 C19orf44Q9H6X5 657 aa20.9■□□□□ 0.94
FDPS-212ENST00000487002 LGR6Q9HBX8 967 aa20.9■□□□□ 0.94
FDPS-212ENST00000487002 RGPD5Q99666 1765 aa20.9■□□□□ 0.94
FDPS-212ENST00000487002 ZBTB7CA1YPR0 619 aa20.9■□□□□ 0.94
FDPS-212ENST00000487002 K7ELQ4 463 aaPredicted RBP20.9■□□□□ 0.94
FDPS-212ENST00000487002 PDE1AP54750 535 aa20.9■□□□□ 0.94
FDPS-212ENST00000487002 ANKRD24Q8TF21 1146 aa20.9■□□□□ 0.94
FDPS-212ENST00000487002 APBB1O00213 710 aa20.89■□□□□ 0.93
FDPS-212ENST00000487002 UBTFL1P0CB47 393 aaPredicted RBP20.89■□□□□ 0.93
FDPS-212ENST00000487002 MCM4P33991 863 aa20.89■□□□□ 0.93
FDPS-212ENST00000487002 C1orf141Q5JVX7 400 aa20.89■□□□□ 0.93
FDPS-212ENST00000487002 KRT28Q7Z3Y7 464 aa20.89■□□□□ 0.93
FDPS-212ENST00000487002 USP44Q9H0E7 712 aa20.89■□□□□ 0.93
FDPS-212ENST00000487002 USP26Q9BXU7 913 aa20.88■□□□□ 0.93
FDPS-212ENST00000487002 BTBD11A6QL63 1104 aa20.88■□□□□ 0.93
FDPS-212ENST00000487002 REC8O95072 547 aa20.88■□□□□ 0.93
FDPS-212ENST00000487002 LRRFIP2Q9Y608 721 aaKnown RBP20.88■□□□□ 0.93
FDPS-212ENST00000487002 PLEKHG2Q9H7P9 1386 aa20.88■□□□□ 0.93
FDPS-212ENST00000487002 RNMTO43148 476 aaKnown RBP20.87■□□□□ 0.93
FDPS-212ENST00000487002 SRCIN1Q9C0H9 1055 aa20.87■□□□□ 0.93
FDPS-212ENST00000487002 EXOC6BQ9Y2D4 811 aa20.87■□□□□ 0.93
FDPS-212ENST00000487002 AOX1Q06278 1338 aa20.87■□□□□ 0.93
FDPS-212ENST00000487002 PNMA6EA0A0J9YXQ4 647 aa20.87■□□□□ 0.93
FDPS-212ENST00000487002 PHAXQ9H814 394 aaKnown RBP20.87■□□□□ 0.93
FDPS-212ENST00000487002 CRYBG1Q9Y4K1 1723 aa20.86■□□□□ 0.93
FDPS-212ENST00000487002 HEG1Q9ULI3 1381 aa20.86■□□□□ 0.93
FDPS-212ENST00000487002 XPCQ01831 940 aaPredicted RBP20.86■□□□□ 0.93
FDPS-212ENST00000487002 SSH3Q8TE77 659 aa20.86■□□□□ 0.93
FDPS-212ENST00000487002 CHPF2Q9P2E5 772 aa20.85■□□□□ 0.93
FDPS-212ENST00000487002 STAP2Q9UGK3 403 aa20.85■□□□□ 0.93
FDPS-212ENST00000487002 ERBB3P21860 1342 aa20.84■□□□□ 0.93
FDPS-212ENST00000487002 DDX11L8A8MPP1 907 aa20.84■□□□□ 0.93
FDPS-212ENST00000487002 ERC2O15083 957 aa20.84■□□□□ 0.93
FDPS-212ENST00000487002 MX1P20591 662 aa20.84■□□□□ 0.93
FDPS-212ENST00000487002 MPRIPQ6WCQ1 1025 aa20.84■□□□□ 0.93
FDPS-212ENST00000487002 SCN11AQ9UI33 1791 aa20.84■□□□□ 0.93
FDPS-212ENST00000487002 STRCP1A6NGW2 1772 aa20.84■□□□□ 0.93
FDPS-212ENST00000487002 CD2BP2O95400 341 aaKnown RBP20.83■□□□□ 0.93
FDPS-212ENST00000487002 EIF2S2P20042 333 aaKnown RBP20.83■□□□□ 0.93
FDPS-212ENST00000487002 DNAAF4Q8WXU2 420 aa20.83■□□□□ 0.93
FDPS-212ENST00000487002 RAB11FIP3O75154 756 aa20.83■□□□□ 0.92
FDPS-212ENST00000487002 POLA2Q14181 598 aa20.83■□□□□ 0.92
FDPS-212ENST00000487002 LMOD2Q6P5Q4 547 aa20.83■□□□□ 0.92
FDPS-212ENST00000487002 DBF4Q9UBU7 674 aaPredicted RBP20.83■□□□□ 0.92
FDPS-212ENST00000487002 COL18A1P39060 1754 aa20.83■□□□□ 0.92
FDPS-212ENST00000487002 BEND3Q5T5X7 828 aa20.82■□□□□ 0.92
FDPS-212ENST00000487002 HSP90AA1P07900 732 aaKnown RBP20.82■□□□□ 0.92
FDPS-212ENST00000487002 RAB3GAP1Q15042 981 aa20.82■□□□□ 0.92
FDPS-212ENST00000487002 RBM42Q9BTD8 480 aaKnown RBP20.82■□□□□ 0.92
FDPS-212ENST00000487002 KCNQ3O43525 872 aa20.81■□□□□ 0.92
FDPS-212ENST00000487002 AXIN2Q9Y2T1 843 aa20.81■□□□□ 0.92
FDPS-212ENST00000487002 ADCY9O60503 1353 aa20.81■□□□□ 0.92
FDPS-212ENST00000487002 AK9Q5TCS8 1911 aa20.79■□□□□ 0.92
FDPS-212ENST00000487002 TMEM94Q12767 1356 aa20.79■□□□□ 0.92
FDPS-212ENST00000487002 PI4KAP2A4QPH2 592 aa20.79■□□□□ 0.92
FDPS-212ENST00000487002 GIGYF1O75420 1035 aaPredicted RBP20.79■□□□□ 0.92
FDPS-212ENST00000487002 ATF3P18847 181 aa20.79■□□□□ 0.92
FDPS-212ENST00000487002 PTMSP20962 102 aa20.79■□□□□ 0.92
FDPS-212ENST00000487002 PI4KAP1Q8N8J0 262 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms