RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 SLC15A2Q16348 729 aa23.61■■□□□ 1.37
SREBF1-213ENST00000485080 IL17REQ8NFR9 667 aa23.61■■□□□ 1.37
SREBF1-213ENST00000485080 STK32BQ9NY57 414 aa23.6■■□□□ 1.37
SREBF1-213ENST00000485080 VIRMAQ69YN4 1812 aaKnown RBP23.59■■□□□ 1.37
SREBF1-213ENST00000485080 LOC102724428A0A0B4J2F2 783 aa23.59■■□□□ 1.37
SREBF1-213ENST00000485080 PSDA5PKW4 1024 aaPredicted RBP23.59■■□□□ 1.37
SREBF1-213ENST00000485080 SIK1P57059 783 aa23.59■■□□□ 1.37
SREBF1-213ENST00000485080 AKT1S1Q96B36 256 aa23.59■■□□□ 1.37
SREBF1-213ENST00000485080 ZNF831Q5JPB2 1677 aa23.59■■□□□ 1.37
SREBF1-213ENST00000485080 WDR43Q15061 677 aaKnown RBP eCLIP23.58■■□□□ 1.37
SREBF1-213ENST00000485080 NFE2L2Q16236 605 aa23.56■■□□□ 1.36
SREBF1-213ENST00000485080 ADAMTS8Q9UP79 889 aa23.56■■□□□ 1.36
SREBF1-213ENST00000485080 MAPK8IP3Q9UPT6 1336 aa23.56■■□□□ 1.36
SREBF1-213ENST00000485080 KCNQ4P56696 695 aa23.55■■□□□ 1.36
SREBF1-213ENST00000485080 TAF1LQ8IZX4 1826 aa23.54■■□□□ 1.36
SREBF1-213ENST00000485080 TEFQ10587 303 aa23.54■■□□□ 1.36
SREBF1-213ENST00000485080 ZNF827Q17R98 1081 aa23.54■■□□□ 1.36
SREBF1-213ENST00000485080 RTF1Q92541 710 aaKnown RBP23.54■■□□□ 1.36
SREBF1-213ENST00000485080 SLC4A9Q96Q91 983 aa23.53■■□□□ 1.36
SREBF1-213ENST00000485080 C5P01031 1676 aa23.53■■□□□ 1.36
SREBF1-213ENST00000485080 QSER1Q2KHR3 1735 aa23.53■■□□□ 1.36
SREBF1-213ENST00000485080 SIPA1L3O60292 1781 aaPredicted RBP23.52■■□□□ 1.36
SREBF1-213ENST00000485080 RUNDC1Q96C34 613 aa23.52■■□□□ 1.36
SREBF1-213ENST00000485080 ATP6V1AP38606 617 aa23.51■■□□□ 1.35
SREBF1-213ENST00000485080 ITPK1Q13572 414 aa23.51■■□□□ 1.35
SREBF1-213ENST00000485080 CASZ1Q86V15 1759 aa23.5■■□□□ 1.35
SREBF1-213ENST00000485080 CCDC184Q52MB2 194 aa23.5■■□□□ 1.35
SREBF1-213ENST00000485080 DLG5Q8TDM6 1919 aa23.5■■□□□ 1.35
SREBF1-213ENST00000485080 CICQ96RK0 1608 aaPredicted RBP23.5■■□□□ 1.35
SREBF1-213ENST00000485080 C4BP0C0L5 1744 aa23.48■■□□□ 1.35
SREBF1-213ENST00000485080 TMPOP42166 694 aaKnown RBP23.48■■□□□ 1.35
SREBF1-213ENST00000485080 MCM10Q7L590 875 aa23.48■■□□□ 1.35
SREBF1-213ENST00000485080 VSIG10Q8N0Z9 540 aa23.48■■□□□ 1.35
SREBF1-213ENST00000485080 LINC00116Q8NCU8 138 aa23.48■■□□□ 1.35
SREBF1-213ENST00000485080 PNISRQ8TF01 805 aaKnown RBP23.48■■□□□ 1.35
SREBF1-213ENST00000485080 RBM42Q9BTD8 480 aaKnown RBP23.48■■□□□ 1.35
SREBF1-213ENST00000485080 TFCP2L1Q9NZI6 479 aa23.48■■□□□ 1.35
SREBF1-213ENST00000485080 KCPQ6ZWJ8 1503 aa23.48■■□□□ 1.35
SREBF1-213ENST00000485080 PTCD1O75127 700 aaKnown RBP23.47■■□□□ 1.35
SREBF1-213ENST00000485080 SLC39A6Q13433 755 aa23.47■■□□□ 1.35
SREBF1-213ENST00000485080 RC3H1Q5TC82 1133 aaKnown RBP23.47■■□□□ 1.35
SREBF1-213ENST00000485080 ZNF790Q6PG37 636 aa23.47■■□□□ 1.35
SREBF1-213ENST00000485080 UBR2Q8IWV8 1755 aa23.47■■□□□ 1.35
SREBF1-213ENST00000485080 PNPLA7Q6ZV29 1317 aa23.46■■□□□ 1.35
SREBF1-213ENST00000485080 FLAD1Q8NFF5 587 aa23.46■■□□□ 1.35
SREBF1-213ENST00000485080 LRP5O75197 1615 aa23.45■■□□□ 1.34
SREBF1-213ENST00000485080 RIPK4P57078 832 aa23.45■■□□□ 1.34
SREBF1-213ENST00000485080 LMOD3Q0VAK6 560 aa23.45■■□□□ 1.34
SREBF1-213ENST00000485080 DCTN1Q14203 1278 aa23.45■■□□□ 1.34
SREBF1-213ENST00000485080 SLC16A10Q8TF71 515 aa23.45■■□□□ 1.34
SREBF1-213ENST00000485080 PDGFDQ9GZP0 370 aaPredicted RBP23.45■■□□□ 1.34
SREBF1-213ENST00000485080 MRS2Q9HD23 443 aa23.45■■□□□ 1.34
SREBF1-213ENST00000485080 CNTNAP4Q9C0A0 1308 aa23.44■■□□□ 1.34
SREBF1-213ENST00000485080 BTBD11A6QL63 1104 aa23.44■■□□□ 1.34
SREBF1-213ENST00000485080 TAF7Q15545 349 aaPredicted RBP23.44■■□□□ 1.34
SREBF1-213ENST00000485080 CCDC146Q8IYE0 955 aa23.44■■□□□ 1.34
SREBF1-213ENST00000485080 TTC5Q8N0Z6 440 aa23.44■■□□□ 1.34
SREBF1-213ENST00000485080 TUBGCP6Q96RT7 1819 aa23.44■■□□□ 1.34
SREBF1-213ENST00000485080 COL5A3P25940 1745 aaPredicted RBP23.44■■□□□ 1.34
SREBF1-213ENST00000485080 AK7Q96M32 723 aa23.43■■□□□ 1.34
SREBF1-213ENST00000485080 UBR3Q6ZT12 1888 aa23.41■■□□□ 1.34
SREBF1-213ENST00000485080 SSFA2P28290 1259 aa23.41■■□□□ 1.34
SREBF1-213ENST00000485080 ZNF496Q96IT1 587 aaPredicted RBP23.41■■□□□ 1.34
SREBF1-213ENST00000485080 MTFR1LQ9H019 292 aa23.41■■□□□ 1.34
SREBF1-213ENST00000485080 SPON1Q9HCB6 807 aa23.41■■□□□ 1.34
SREBF1-213ENST00000485080 TJP1Q07157 1748 aa23.41■■□□□ 1.34
SREBF1-213ENST00000485080 FMNL2Q96PY5 1086 aa23.4■■□□□ 1.34
SREBF1-213ENST00000485080 BABAM1Q9NWV8 329 aa23.4■■□□□ 1.34
SREBF1-213ENST00000485080 MYH14Q7Z406 1995 aaKnown RBP23.4■■□□□ 1.34
SREBF1-213ENST00000485080 HEG1Q9ULI3 1381 aa23.4■■□□□ 1.34
SREBF1-213ENST00000485080 COL23A1Q86Y22 540 aaPredicted RBP23.39■■□□□ 1.33
SREBF1-213ENST00000485080 TEX13AQ9BXU3 409 aaPredicted RBP23.39■■□□□ 1.33
SREBF1-213ENST00000485080 TRIM35Q9UPQ4 493 aa23.39■■□□□ 1.33
SREBF1-213ENST00000485080 ADRA2BP18089 450 aa23.38■■□□□ 1.33
SREBF1-213ENST00000485080 AMIGO3Q86WK7 504 aa23.38■■□□□ 1.33
SREBF1-213ENST00000485080 DNAJC10Q8IXB1 793 aa23.38■■□□□ 1.33
SREBF1-213ENST00000485080 GNPATO15228 680 aa23.37■■□□□ 1.33
SREBF1-213ENST00000485080 RPS6KA4O75676 772 aa23.37■■□□□ 1.33
SREBF1-213ENST00000485080 CYP19A1P11511 503 aaPredicted RBP23.37■■□□□ 1.33
SREBF1-213ENST00000485080 CRKLP46109 303 aaKnown RBP23.37■■□□□ 1.33
SREBF1-213ENST00000485080 NCBP3Q53F19 620 aaKnown RBP23.37■■□□□ 1.33
SREBF1-213ENST00000485080 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.36■■□□□ 1.33
SREBF1-213ENST00000485080 APAF1O14727 1248 aa23.36■■□□□ 1.33
SREBF1-213ENST00000485080 KCNQ3O43525 872 aa23.36■■□□□ 1.33
SREBF1-213ENST00000485080 ZBTB7AO95365 584 aa23.36■■□□□ 1.33
SREBF1-213ENST00000485080 INTS5Q6P9B9 1019 aaKnown RBP23.36■■□□□ 1.33
SREBF1-213ENST00000485080 THUMPD2Q9BTF0 503 aaKnown RBP23.36■■□□□ 1.33
SREBF1-213ENST00000485080 RRP7AQ9Y3A4 280 aaKnown RBP23.36■■□□□ 1.33
SREBF1-213ENST00000485080 RTCBQ9Y3I0 505 aaKnown RBP23.36■■□□□ 1.33
SREBF1-213ENST00000485080 COL24A1Q17RW2 1714 aa23.36■■□□□ 1.33
SREBF1-213ENST00000485080 STARD3NLO95772 234 aa23.35■■□□□ 1.33
SREBF1-213ENST00000485080 SGIP1Q9BQI5 828 aa23.35■■□□□ 1.33
SREBF1-213ENST00000485080 PTGER2P43116 358 aa23.34■■□□□ 1.33
SREBF1-213ENST00000485080 KDM3BQ7LBC6 1761 aa23.34■■□□□ 1.33
SREBF1-213ENST00000485080 NEUROD2Q15784 382 aa23.33■■□□□ 1.33
SREBF1-213ENST00000485080 CCDC87Q9NVE4 849 aa23.33■■□□□ 1.33
SREBF1-213ENST00000485080 SNRPA1P09661 255 aaKnown RBP23.32■■□□□ 1.32
SREBF1-213ENST00000485080 TRAPPC3LQ5T215 181 aa23.32■■□□□ 1.32
SREBF1-213ENST00000485080 CCER2I3L3R5 266 aa23.31■■□□□ 1.32
SREBF1-213ENST00000485080 MIS18AQ9NYP9 233 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms