RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 PBRM1Q86U86 1689 aa17.81■□□□□ 0.44
RXRA-203ENST00000484822 CBFA2T2O43439 604 aa17.8■□□□□ 0.44
RXRA-203ENST00000484822 PIP4K2BP78356 416 aa17.8■□□□□ 0.44
RXRA-203ENST00000484822 TNPO1Q92973 898 aaKnown RBP17.8■□□□□ 0.44
RXRA-203ENST00000484822 SPDYE4A6NLX3 237 aa17.8■□□□□ 0.44
RXRA-203ENST00000484822 POLR3GO15318 223 aaPredicted RBP17.8■□□□□ 0.44
RXRA-203ENST00000484822 ANKRD1Q15327 319 aa17.8■□□□□ 0.44
RXRA-203ENST00000484822 SART3Q15020 963 aaKnown RBP17.8■□□□□ 0.44
RXRA-203ENST00000484822 PPP4R3BQ5MIZ7 849 aa17.8■□□□□ 0.44
RXRA-203ENST00000484822 TAX1BP1Q86VP1 789 aa17.79■□□□□ 0.44
RXRA-203ENST00000484822 DISP1Q96F81 1524 aa17.79■□□□□ 0.44
RXRA-203ENST00000484822 NEFHP12036 1026 aa17.79■□□□□ 0.44
RXRA-203ENST00000484822 HDGFL1Q5TGJ6 251 aa17.79■□□□□ 0.44
RXRA-203ENST00000484822 CALCOCO1Q9P1Z2 691 aa17.79■□□□□ 0.44
RXRA-203ENST00000484822 PHF8Q9UPP1 1060 aa17.79■□□□□ 0.44
RXRA-203ENST00000484822 CFAP43Q8NDM7 1665 aa17.79■□□□□ 0.44
RXRA-203ENST00000484822 JAKMIP1Q96N16 626 aaKnown RBP17.79■□□□□ 0.44
RXRA-203ENST00000484822 CABP4P57796 275 aa17.78■□□□□ 0.44
RXRA-203ENST00000484822 SHANK2Q9UPX8 1470 aa17.78■□□□□ 0.44
RXRA-203ENST00000484822 TXLNAP40222 546 aa17.78■□□□□ 0.44
RXRA-203ENST00000484822 C16orf45Q96MC5 204 aaPredicted RBP17.78■□□□□ 0.44
RXRA-203ENST00000484822 PDRG1Q9NUG6 133 aa17.78■□□□□ 0.44
RXRA-203ENST00000484822 ERLIN2O94905 339 aa17.78■□□□□ 0.44
RXRA-203ENST00000484822 BLOC1S2Q6QNY1 142 aa17.78■□□□□ 0.44
RXRA-203ENST00000484822 KIF18AQ8NI77 898 aa17.78■□□□□ 0.44
RXRA-203ENST00000484822 CFAP100Q494V2 611 aa17.77■□□□□ 0.44
RXRA-203ENST00000484822 SAMD1Q6SPF0 538 aaPredicted RBP17.77■□□□□ 0.44
RXRA-203ENST00000484822 GTF2F1P35269 517 aaKnown RBP eCLIP17.77■□□□□ 0.449e-7■■■■□ 23.1
RXRA-203ENST00000484822 CCAR1Q8IX12 1150 aaKnown RBP17.77■□□□□ 0.44
RXRA-203ENST00000484822 SFPQP23246 707 aaKnown RBP eCLIP17.77■□□□□ 0.443e-6■■■□□ 18.9
RXRA-203ENST00000484822 ARHGAP29Q52LW3 1261 aa17.77■□□□□ 0.44
RXRA-203ENST00000484822 ZNF428Q96B54 188 aa17.77■□□□□ 0.44
RXRA-203ENST00000484822 DACH1Q9UI36 760 aa17.77■□□□□ 0.44
RXRA-203ENST00000484822 CFAP45Q9UL16 551 aa17.77■□□□□ 0.44
RXRA-203ENST00000484822 NFE2L2Q16236 605 aa17.77■□□□□ 0.43
RXRA-203ENST00000484822 URI1O94763 535 aaPredicted RBP17.76■□□□□ 0.43
RXRA-203ENST00000484822 TNNT1P13805 278 aa17.76■□□□□ 0.43
RXRA-203ENST00000484822 UHRF1BP1LA0JNW5 1464 aa17.76■□□□□ 0.43
RXRA-203ENST00000484822 RBM42Q9BTD8 480 aaKnown RBP17.76■□□□□ 0.43
RXRA-203ENST00000484822 SLFN5Q08AF3 891 aa17.76■□□□□ 0.43
RXRA-203ENST00000484822 CWC27Q6UX04 472 aaKnown RBP17.76■□□□□ 0.43
RXRA-203ENST00000484822 GIMAP7Q8NHV1 300 aa17.76■□□□□ 0.43
RXRA-203ENST00000484822 PPP1R1BQ9UD71 204 aaPredicted RBP17.76■□□□□ 0.43
RXRA-203ENST00000484822 KIF2AO00139 706 aaPredicted RBP17.75■□□□□ 0.43
RXRA-203ENST00000484822 CNKSR2Q8WXI2 1034 aa17.75■□□□□ 0.43
RXRA-203ENST00000484822 NSD2O96028 1365 aa17.75■□□□□ 0.43
RXRA-203ENST00000484822 ENOX2Q16206 610 aaKnown RBP17.75■□□□□ 0.43
RXRA-203ENST00000484822 CRACR2AQ9BSW2 395 aa17.75■□□□□ 0.43
RXRA-203ENST00000484822 IL1RAPL2Q9NP60 686 aa17.75■□□□□ 0.43
RXRA-203ENST00000484822 TRMT1Q9NXH9 659 aaKnown RBP17.75■□□□□ 0.43
RXRA-203ENST00000484822 ZC3H6P61129 1189 aaKnown RBP17.74■□□□□ 0.43
RXRA-203ENST00000484822 ZSCAN31Q96LW9 406 aaPredicted RBP17.74■□□□□ 0.43
RXRA-203ENST00000484822 CCDC183Q5T5S1 534 aa17.74■□□□□ 0.43
RXRA-203ENST00000484822 TMEM57Q8N5G2 664 aa17.74■□□□□ 0.43
RXRA-203ENST00000484822 CDK5RAP3Q96JB5 506 aa17.74■□□□□ 0.43
RXRA-203ENST00000484822 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.74■□□□□ 0.433e-7■■■■■ 205.8
RXRA-203ENST00000484822 ERC1Q8IUD2 1116 aa17.74■□□□□ 0.43
RXRA-203ENST00000484822 DDX54Q8TDD1 881 aaKnown RBP17.74■□□□□ 0.43
RXRA-203ENST00000484822 DDX11Q96FC9 970 aa17.74■□□□□ 0.43
RXRA-203ENST00000484822 EPB41L2O43491 1005 aaKnown RBP17.74■□□□□ 0.43
RXRA-203ENST00000484822 SIL1Q9H173 461 aa17.74■□□□□ 0.43
RXRA-203ENST00000484822 TMPOP42166 694 aaKnown RBP17.73■□□□□ 0.43
RXRA-203ENST00000484822 CCT4P50991 539 aaKnown RBP17.73■□□□□ 0.43
RXRA-203ENST00000484822 TBC1D2BQ9UPU7 963 aa17.73■□□□□ 0.43
RXRA-203ENST00000484822 NME9Q86XW9 330 aa17.73■□□□□ 0.43
RXRA-203ENST00000484822 LUC7LQ9NQ29 371 aaKnown RBP17.72■□□□□ 0.43
RXRA-203ENST00000484822 SMTNL1A8MU46 457 aa17.72■□□□□ 0.43
RXRA-203ENST00000484822 CLCN1P35523 988 aa17.72■□□□□ 0.43
RXRA-203ENST00000484822 IPO4Q8TEX9 1081 aaKnown RBP17.72■□□□□ 0.43
RXRA-203ENST00000484822 CLIP2Q9UDT6 1046 aa17.72■□□□□ 0.43
RXRA-203ENST00000484822 DYNC1I1O14576 645 aa17.72■□□□□ 0.43
RXRA-203ENST00000484822 CCDC83Q8IWF9 413 aa17.72■□□□□ 0.43
RXRA-203ENST00000484822 TANGO6Q9C0B7 1094 aa17.72■□□□□ 0.43
RXRA-203ENST00000484822 CASTP20810 708 aaKnown RBP17.71■□□□□ 0.43
RXRA-203ENST00000484822 GDPD2Q9HCC8 539 aa17.71■□□□□ 0.43
RXRA-203ENST00000484822 GNL3LQ9NVN8 582 aaKnown RBP17.71■□□□□ 0.43
RXRA-203ENST00000484822 ANKRD62A6NC57 917 aa17.71■□□□□ 0.43
RXRA-203ENST00000484822 GBP3Q9H0R5 595 aa17.71■□□□□ 0.43
RXRA-203ENST00000484822 LRPPRCP42704 1394 aaKnown RBP17.71■□□□□ 0.43
RXRA-203ENST00000484822 SHTN1A0MZ66 631 aa17.71■□□□□ 0.42
RXRA-203ENST00000484822 GNAT3A8MTJ3 354 aa17.71■□□□□ 0.42
RXRA-203ENST00000484822 IQCEQ6IPM2 695 aa17.71■□□□□ 0.42
RXRA-203ENST00000484822 STIM1Q13586 685 aa17.7■□□□□ 0.42
RXRA-203ENST00000484822 GPATCH11Q8N954 259 aa17.7■□□□□ 0.42
RXRA-203ENST00000484822 CKAP2LQ8IYA6 745 aa17.7■□□□□ 0.42
RXRA-203ENST00000484822 TRIM22Q8IYM9 498 aa17.7■□□□□ 0.42
RXRA-203ENST00000484822 PANK2Q9BZ23 570 aa17.7■□□□□ 0.42
RXRA-203ENST00000484822 SRCIN1Q9C0H9 1055 aa17.7■□□□□ 0.42
RXRA-203ENST00000484822 KRT18P05783 430 aaKnown RBP17.7■□□□□ 0.42
RXRA-203ENST00000484822 ABCC11Q96J66 1382 aa17.69■□□□□ 0.42
RXRA-203ENST00000484822 FOXO3O43524 673 aa17.69■□□□□ 0.42
RXRA-203ENST00000484822 CEP170Q5SW79 1584 aa17.69■□□□□ 0.42
RXRA-203ENST00000484822 XRCC6P12956 609 aaKnown RBP eCLIP17.69■□□□□ 0.42
RXRA-203ENST00000484822 SEPT7Q16181 437 aaKnown RBP17.69■□□□□ 0.42
RXRA-203ENST00000484822 WDHD1O75717 1129 aaPredicted RBP17.69■□□□□ 0.42
RXRA-203ENST00000484822 SYCP1Q15431 976 aa17.69■□□□□ 0.42
RXRA-203ENST00000484822 ADCY5O95622 1261 aa17.69■□□□□ 0.42
RXRA-203ENST00000484822 KIAA1328Q86T90 577 aa17.69■□□□□ 0.42
RXRA-203ENST00000484822 EXOC6BQ9Y2D4 811 aa17.69■□□□□ 0.42
RXRA-203ENST00000484822 RALGAPBQ86X10 1494 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms