RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 DOT1LQ8TEK3 1739 aa18.47■□□□□ 0.55
SRSF6-202ENST00000483871 TMOD3Q9NYL9 352 aa18.46■□□□□ 0.55
SRSF6-202ENST00000483871 ITGB4P16144 1822 aa18.46■□□□□ 0.55
SRSF6-202ENST00000483871 ZBED9Q6R2W3 1325 aa18.46■□□□□ 0.55
SRSF6-202ENST00000483871 BCL9O00512 1426 aa18.46■□□□□ 0.55
SRSF6-202ENST00000483871 TRIM37O94972 964 aa18.45■□□□□ 0.54
SRSF6-202ENST00000483871 SLC39A6Q13433 755 aa18.45■□□□□ 0.54
SRSF6-202ENST00000483871 BTBD11A6QL63 1104 aa18.44■□□□□ 0.54
SRSF6-202ENST00000483871 GOLGA2Q08379 1002 aa18.44■□□□□ 0.54
SRSF6-202ENST00000483871 SBF2Q86WG5 1849 aa18.44■□□□□ 0.54
SRSF6-202ENST00000483871 KCNQ3O43525 872 aa18.44■□□□□ 0.54
SRSF6-202ENST00000483871 ZNF853P0CG23 659 aa18.43■□□□□ 0.54
SRSF6-202ENST00000483871 CFAP44Q96MT7 982 aa18.43■□□□□ 0.54
SRSF6-202ENST00000483871 ASAP1Q9ULH1 1129 aa18.43■□□□□ 0.54
SRSF6-202ENST00000483871 MRC1P22897 1456 aa18.42■□□□□ 0.54
SRSF6-202ENST00000483871 CHL1O00533 1208 aa18.42■□□□□ 0.54
SRSF6-202ENST00000483871 CALD1Q05682 793 aaKnown RBP18.42■□□□□ 0.54
SRSF6-202ENST00000483871 ILDR2Q71H61 639 aa18.42■□□□□ 0.54
SRSF6-202ENST00000483871 TSR2Q969E8 191 aaKnown RBP18.42■□□□□ 0.54
SRSF6-202ENST00000483871 SIPA1L3O60292 1781 aaPredicted RBP18.42■□□□□ 0.54
SRSF6-202ENST00000483871 MBIPQ9NS73 344 aa18.41■□□□□ 0.54
SRSF6-202ENST00000483871 IFT57Q9NWB7 429 aa18.41■□□□□ 0.54
SRSF6-202ENST00000483871 TSPYL4Q9UJ04 414 aa18.41■□□□□ 0.54
SRSF6-202ENST00000483871 IL16Q14005 1332 aa18.41■□□□□ 0.54
SRSF6-202ENST00000483871 GNAI1P63096 354 aa18.41■□□□□ 0.54
SRSF6-202ENST00000483871 SLFN5Q08AF3 891 aa18.41■□□□□ 0.54
SRSF6-202ENST00000483871 BCL11BQ9C0K0 894 aaPredicted RBP18.41■□□□□ 0.54
SRSF6-202ENST00000483871 ATG3Q9NT62 314 aa18.41■□□□□ 0.54
SRSF6-202ENST00000483871 ZNF790Q6PG37 636 aa18.4■□□□□ 0.54
SRSF6-202ENST00000483871 NHSQ6T4R5 1651 aa18.38■□□□□ 0.53
SRSF6-202ENST00000483871 E9PSI1 815 aa18.38■□□□□ 0.53
SRSF6-202ENST00000483871 PTCD1O75127 700 aaKnown RBP18.38■□□□□ 0.53
SRSF6-202ENST00000483871 KRT24Q2M2I5 525 aa18.38■□□□□ 0.53
SRSF6-202ENST00000483871 TRMT2AQ8IZ69 625 aaKnown RBP18.37■□□□□ 0.53
SRSF6-202ENST00000483871 FANCIQ9NVI1 1328 aa18.36■□□□□ 0.53
SRSF6-202ENST00000483871 BTAF1O14981 1849 aa18.36■□□□□ 0.53
SRSF6-202ENST00000483871 DUSP27Q5VZP5 1158 aa18.36■□□□□ 0.53
SRSF6-202ENST00000483871 TTC5Q8N0Z6 440 aa18.36■□□□□ 0.53
SRSF6-202ENST00000483871 ZNF496Q96IT1 587 aaPredicted RBP18.36■□□□□ 0.53
SRSF6-202ENST00000483871 BABAM1Q9NWV8 329 aa18.36■□□□□ 0.53
SRSF6-202ENST00000483871 EIF4A1P60842 406 aaKnown RBP18.35■□□□□ 0.53
SRSF6-202ENST00000483871 RBM42Q9BTD8 480 aaKnown RBP18.35■□□□□ 0.53
SRSF6-202ENST00000483871 MYH16Q9H6N6 1097 aa18.35■□□□□ 0.53
SRSF6-202ENST00000483871 ELL2O00472 640 aaPredicted RBP18.34■□□□□ 0.53
SRSF6-202ENST00000483871 APBA3O96018 575 aa18.34■□□□□ 0.53
SRSF6-202ENST00000483871 KDM3BQ7LBC6 1761 aa18.34■□□□□ 0.53
SRSF6-202ENST00000483871 SLC4A9Q96Q91 983 aa18.34■□□□□ 0.53
SRSF6-202ENST00000483871 PALLDQ8WX93 1383 aa18.33■□□□□ 0.52
SRSF6-202ENST00000483871 PRAMEF22A3QJZ6 481 aa18.33■□□□□ 0.52
SRSF6-202ENST00000483871 KCNQ4P56696 695 aa18.33■□□□□ 0.52
SRSF6-202ENST00000483871 EXOSC9Q06265 439 aaKnown RBP18.33■□□□□ 0.52
SRSF6-202ENST00000483871 TSPYL6Q8N831 410 aa18.33■□□□□ 0.52
SRSF6-202ENST00000483871 C8orf58Q8NAV2 365 aa18.33■□□□□ 0.52
SRSF6-202ENST00000483871 PAPPAQ13219 1627 aa18.32■□□□□ 0.52
SRSF6-202ENST00000483871 SMARCC1Q92922 1105 aaPredicted RBP18.31■□□□□ 0.52
SRSF6-202ENST00000483871 FMNL2Q96PY5 1086 aa18.31■□□□□ 0.52
SRSF6-202ENST00000483871 LOC102724428A0A0B4J2F2 783 aa18.31■□□□□ 0.52
SRSF6-202ENST00000483871 SIK1P57059 783 aa18.31■□□□□ 0.52
SRSF6-202ENST00000483871 KCPQ6ZWJ8 1503 aa18.3■□□□□ 0.52
SRSF6-202ENST00000483871 GIGYF1O75420 1035 aaPredicted RBP18.29■□□□□ 0.52
SRSF6-202ENST00000483871 PROM2Q8N271 834 aa18.29■□□□□ 0.52
SRSF6-202ENST00000483871 UBR2Q8IWV8 1755 aa18.29■□□□□ 0.52
SRSF6-202ENST00000483871 HEG1Q9ULI3 1381 aa18.29■□□□□ 0.52
SRSF6-202ENST00000483871 TNS1Q9HBL0 1735 aaKnown RBP18.29■□□□□ 0.52
SRSF6-202ENST00000483871 PLSCR1O15162 318 aa18.28■□□□□ 0.52
SRSF6-202ENST00000483871 ATP6V1AP38606 617 aa18.28■□□□□ 0.52
SRSF6-202ENST00000483871 EN1Q05925 392 aaPredicted RBP18.28■□□□□ 0.52
SRSF6-202ENST00000483871 DEFB132Q7Z7B7 95 aa18.28■□□□□ 0.52
SRSF6-202ENST00000483871 UPF1Q92900 1129 aaKnown RBP eCLIP18.28■□□□□ 0.52
SRSF6-202ENST00000483871 USP16Q9Y5T5 823 aa18.28■□□□□ 0.52
SRSF6-202ENST00000483871 SF3B2Q13435 895 aaKnown RBP18.28■□□□□ 0.52
SRSF6-202ENST00000483871 SNRPA1P09661 255 aaKnown RBP18.27■□□□□ 0.52
SRSF6-202ENST00000483871 ITPK1Q13572 414 aa18.27■□□□□ 0.52
SRSF6-202ENST00000483871 TWISTNBQ3B726 338 aaPredicted RBP18.27■□□□□ 0.52
SRSF6-202ENST00000483871 DNAJC10Q8IXB1 793 aa18.27■□□□□ 0.52
SRSF6-202ENST00000483871 NECTIN2Q92692 538 aa18.27■□□□□ 0.52
SRSF6-202ENST00000483871 LRRC4BQ9NT99 713 aa18.27■□□□□ 0.52
SRSF6-202ENST00000483871 VAMP4O75379 141 aa18.26■□□□□ 0.51
SRSF6-202ENST00000483871 EIF2S2P20042 333 aaKnown RBP18.26■□□□□ 0.51
SRSF6-202ENST00000483871 EZH2Q15910 746 aaKnown RBP18.26■□□□□ 0.51
SRSF6-202ENST00000483871 CCNL1Q9UK58 526 aaPredicted RBP18.26■□□□□ 0.51
SRSF6-202ENST00000483871 TXNRD1Q16881 649 aa18.25■□□□□ 0.51
SRSF6-202ENST00000483871 VSIG10Q8N0Z9 540 aa18.25■□□□□ 0.51
SRSF6-202ENST00000483871 LY75O60449 1722 aa18.25■□□□□ 0.51
SRSF6-202ENST00000483871 CCDC125Q86Z20 511 aa18.25■□□□□ 0.51
SRSF6-202ENST00000483871 CAMKK2Q96RR4 588 aa18.25■□□□□ 0.51
SRSF6-202ENST00000483871 TCERG1O14776 1098 aaKnown RBP18.24■□□□□ 0.51
SRSF6-202ENST00000483871 BAG6P46379 1132 aa18.23■□□□□ 0.51
SRSF6-202ENST00000483871 C5P01031 1676 aa18.23■□□□□ 0.51
SRSF6-202ENST00000483871 CYP19A1P11511 503 aaPredicted RBP18.22■□□□□ 0.51
SRSF6-202ENST00000483871 PIP4K2AP48426 406 aaPredicted RBP18.22■□□□□ 0.51
SRSF6-202ENST00000483871 LINC00116Q8NCU8 138 aa18.22■□□□□ 0.51
SRSF6-202ENST00000483871 A1BGP04217 495 aa18.22■□□□□ 0.51
SRSF6-202ENST00000483871 SLC27A3Q5K4L6 730 aa18.21■□□□□ 0.51
SRSF6-202ENST00000483871 HDGFL1Q5TGJ6 251 aa18.21■□□□□ 0.51
SRSF6-202ENST00000483871 TEX13AQ9BXU3 409 aaPredicted RBP18.21■□□□□ 0.51
SRSF6-202ENST00000483871 TJP1Q07157 1748 aa18.2■□□□□ 0.5
SRSF6-202ENST00000483871 HOXB7P09629 217 aa18.2■□□□□ 0.5
SRSF6-202ENST00000483871 STARD3NLO95772 234 aa18.19■□□□□ 0.5
SRSF6-202ENST00000483871 ANXA1P04083 346 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms