RNA–Protein interactions for RNA: ENST00000483713.5

POLR2F-209, Transcript of RNA polymerase II subunit F, humanhuman

TSL 3

Gene POLR2F, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2F-209ENST00000483713 ZNF853P0CG23 659 aa20.65■□□□□ 0.9
POLR2F-209ENST00000483713 SLFN5Q08AF3 891 aa20.65■□□□□ 0.9
POLR2F-209ENST00000483713 KDM3BQ7LBC6 1761 aa20.64■□□□□ 0.9
POLR2F-209ENST00000483713 NHSQ6T4R5 1651 aa20.64■□□□□ 0.9
POLR2F-209ENST00000483713 CHL1O00533 1208 aa20.64■□□□□ 0.89
POLR2F-209ENST00000483713 TMOD3Q9NYL9 352 aa20.63■□□□□ 0.89
POLR2F-209ENST00000483713 PAPPAQ13219 1627 aa20.63■□□□□ 0.89
POLR2F-209ENST00000483713 SBF2Q86WG5 1849 aa20.62■□□□□ 0.89
POLR2F-209ENST00000483713 FAM196AQ6ZSG2 479 aa20.62■□□□□ 0.89
POLR2F-209ENST00000483713 TRMT2AQ8IZ69 625 aaKnown RBP20.62■□□□□ 0.89
POLR2F-209ENST00000483713 NFATC2IPQ8NCF5 419 aa20.62■□□□□ 0.89
POLR2F-209ENST00000483713 CDCA7LQ96GN5 454 aa20.62■□□□□ 0.89
POLR2F-209ENST00000483713 SPINK5Q9NQ38 1064 aaPredicted RBP20.62■□□□□ 0.89
POLR2F-209ENST00000483713 TSPYL4Q9UJ04 414 aa20.62■□□□□ 0.89
POLR2F-209ENST00000483713 LAS1LQ9Y4W2 734 aaKnown RBP20.62■□□□□ 0.89
POLR2F-209ENST00000483713 FANCIQ9NVI1 1328 aa20.61■□□□□ 0.89
POLR2F-209ENST00000483713 BTBD11A6QL63 1104 aa20.61■□□□□ 0.89
POLR2F-209ENST00000483713 MBIPQ9NS73 344 aa20.61■□□□□ 0.89
POLR2F-209ENST00000483713 KAT6BQ8WYB5 2073 aa20.61■□□□□ 0.89
POLR2F-209ENST00000483713 DUSP27Q5VZP5 1158 aa20.6■□□□□ 0.89
POLR2F-209ENST00000483713 PRIM1P49642 420 aaKnown RBP20.59■□□□□ 0.89
POLR2F-209ENST00000483713 SYTL4Q96C24 671 aaPredicted RBP20.58■□□□□ 0.89
POLR2F-209ENST00000483713 UBR2Q8IWV8 1755 aa20.58■□□□□ 0.89
POLR2F-209ENST00000483713 PIGBQ92521 554 aa20.57■□□□□ 0.88
POLR2F-209ENST00000483713 TSR2Q969E8 191 aaKnown RBP20.57■□□□□ 0.88
POLR2F-209ENST00000483713 ACSBG1Q96GR2 724 aa20.57■□□□□ 0.88
POLR2F-209ENST00000483713 FAM182BQ5T319 152 aa20.56■□□□□ 0.88
POLR2F-209ENST00000483713 ZNF790Q6PG37 636 aa20.56■□□□□ 0.88
POLR2F-209ENST00000483713 TTC5Q8N0Z6 440 aa20.56■□□□□ 0.88
POLR2F-209ENST00000483713 MIS18AQ9NYP9 233 aa20.56■□□□□ 0.88
POLR2F-209ENST00000483713 BTAF1O14981 1849 aa20.55■□□□□ 0.88
POLR2F-209ENST00000483713 SOS1Q07889 1333 aaPredicted RBP20.54■□□□□ 0.88
POLR2F-209ENST00000483713 CT47B1P0C2W7 299 aaPredicted RBP20.53■□□□□ 0.88
POLR2F-209ENST00000483713 BCL11BQ9C0K0 894 aaPredicted RBP20.53■□□□□ 0.88
POLR2F-209ENST00000483713 KCPQ6ZWJ8 1503 aa20.53■□□□□ 0.88
POLR2F-209ENST00000483713 KCNQ2O43526 872 aa20.52■□□□□ 0.88
POLR2F-209ENST00000483713 CENPBP07199 599 aaPredicted RBP20.52■□□□□ 0.88
POLR2F-209ENST00000483713 EIF4A1P60842 406 aaKnown RBP20.52■□□□□ 0.88
POLR2F-209ENST00000483713 SLC39A6Q13433 755 aa20.52■□□□□ 0.88
POLR2F-209ENST00000483713 SMARCC1Q92922 1105 aaPredicted RBP20.52■□□□□ 0.88
POLR2F-209ENST00000483713 ATG3Q9NT62 314 aa20.52■□□□□ 0.88
POLR2F-209ENST00000483713 HOXB7P09629 217 aa20.51■□□□□ 0.87
POLR2F-209ENST00000483713 EXOSC9Q06265 439 aaKnown RBP20.51■□□□□ 0.87
POLR2F-209ENST00000483713 FMNL2Q96PY5 1086 aa20.51■□□□□ 0.87
POLR2F-209ENST00000483713 HEG1Q9ULI3 1381 aa20.5■□□□□ 0.87
POLR2F-209ENST00000483713 KCNQ3O43525 872 aa20.5■□□□□ 0.87
POLR2F-209ENST00000483713 ASAP1Q9ULH1 1129 aa20.5■□□□□ 0.87
POLR2F-209ENST00000483713 ZNF831Q5JPB2 1677 aa20.49■□□□□ 0.87
POLR2F-209ENST00000483713 ILDR2Q71H61 639 aa20.49■□□□□ 0.87
POLR2F-209ENST00000483713 ZNF428Q96B54 188 aa20.49■□□□□ 0.87
POLR2F-209ENST00000483713 CICQ96RK0 1608 aaPredicted RBP20.49■□□□□ 0.87
POLR2F-209ENST00000483713 PALLDQ8WX93 1383 aa20.48■□□□□ 0.87
POLR2F-209ENST00000483713 VSIG10Q8N0Z9 540 aa20.48■□□□□ 0.87
POLR2F-209ENST00000483713 ZNF496Q96IT1 587 aaPredicted RBP20.48■□□□□ 0.87
POLR2F-209ENST00000483713 CHMP4AQ9BY43 222 aa20.48■□□□□ 0.87
POLR2F-209ENST00000483713 LAMB4A4D0S4 1761 aa20.48■□□□□ 0.87
POLR2F-209ENST00000483713 EP400Q96L91 3159 aa20.48■□□□□ 0.87
POLR2F-209ENST00000483713 TRIM37O94972 964 aa20.47■□□□□ 0.87
POLR2F-209ENST00000483713 TWISTNBQ3B726 338 aaPredicted RBP20.47■□□□□ 0.87
POLR2F-209ENST00000483713 C8orf58Q8NAV2 365 aa20.47■□□□□ 0.87
POLR2F-209ENST00000483713 TNS1Q9HBL0 1735 aaKnown RBP20.47■□□□□ 0.87
POLR2F-209ENST00000483713 GIGYF1O75420 1035 aaPredicted RBP20.46■□□□□ 0.87
POLR2F-209ENST00000483713 SNRPA1P09661 255 aaKnown RBP20.46■□□□□ 0.87
POLR2F-209ENST00000483713 LY75O60449 1722 aa20.46■□□□□ 0.87
POLR2F-209ENST00000483713 C5P01031 1676 aa20.45■□□□□ 0.86
POLR2F-209ENST00000483713 RGPD3A6NKT7 1758 aaPredicted RBP20.45■□□□□ 0.86
POLR2F-209ENST00000483713 RGPD4Q7Z3J3 1758 aa20.45■□□□□ 0.86
POLR2F-209ENST00000483713 PTCD1O75127 700 aaKnown RBP20.44■□□□□ 0.86
POLR2F-209ENST00000483713 KRT24Q2M2I5 525 aa20.44■□□□□ 0.86
POLR2F-209ENST00000483713 PTF1AQ7RTS3 328 aa20.44■□□□□ 0.86
POLR2F-209ENST00000483713 TSPYL6Q8N831 410 aa20.44■□□□□ 0.86
POLR2F-209ENST00000483713 VAMP4O75379 141 aa20.43■□□□□ 0.86
POLR2F-209ENST00000483713 TEX13AQ9BXU3 409 aaPredicted RBP20.43■□□□□ 0.86
POLR2F-209ENST00000483713 TJP1Q07157 1748 aa20.42■□□□□ 0.86
POLR2F-209ENST00000483713 LOC102724428A0A0B4J2F2 783 aa20.42■□□□□ 0.86
POLR2F-209ENST00000483713 ELL2O00472 640 aaPredicted RBP20.42■□□□□ 0.86
POLR2F-209ENST00000483713 SIK1P57059 783 aa20.42■□□□□ 0.86
POLR2F-209ENST00000483713 RBM42Q9BTD8 480 aaKnown RBP20.42■□□□□ 0.86
POLR2F-209ENST00000483713 CACNA1FO60840 1977 aa20.41■□□□□ 0.86
POLR2F-209ENST00000483713 HMGB2P26583 209 aaKnown RBP20.4■□□□□ 0.86
POLR2F-209ENST00000483713 ALDH1L2Q3SY69 923 aa20.4■□□□□ 0.86
POLR2F-209ENST00000483713 HDGFL1Q5TGJ6 251 aa20.4■□□□□ 0.86
POLR2F-209ENST00000483713 RCAN3Q9UKA8 241 aa20.4■□□□□ 0.86
POLR2F-209ENST00000483713 PLSCR1O15162 318 aa20.39■□□□□ 0.85
POLR2F-209ENST00000483713 CCDC30Q5VVM6 783 aa20.39■□□□□ 0.85
POLR2F-209ENST00000483713 COL5A3P25940 1745 aaPredicted RBP20.39■□□□□ 0.85
POLR2F-209ENST00000483713 ERBB4Q15303 1308 aa20.38■□□□□ 0.85
POLR2F-209ENST00000483713 SLC4A9Q96Q91 983 aa20.38■□□□□ 0.85
POLR2F-209ENST00000483713 STARD3NLO95772 234 aa20.37■□□□□ 0.85
POLR2F-209ENST00000483713 APBA3O96018 575 aa20.37■□□□□ 0.85
POLR2F-209ENST00000483713 ATP6V1AP38606 617 aa20.37■□□□□ 0.85
POLR2F-209ENST00000483713 RARSP54136 660 aaKnown RBP20.37■□□□□ 0.85
POLR2F-209ENST00000483713 SLC27A3Q5K4L6 730 aa20.37■□□□□ 0.85
POLR2F-209ENST00000483713 CCDC125Q86Z20 511 aa20.37■□□□□ 0.85
POLR2F-209ENST00000483713 STK31Q9BXU1 1019 aa20.37■□□□□ 0.85
POLR2F-209ENST00000483713 PRAMEF22A3QJZ6 481 aa20.36■□□□□ 0.85
POLR2F-209ENST00000483713 SF3B2Q13435 895 aaKnown RBP20.36■□□□□ 0.85
POLR2F-209ENST00000483713 DNAJC10Q8IXB1 793 aa20.36■□□□□ 0.85
POLR2F-209ENST00000483713 CCNL1Q9UK58 526 aaPredicted RBP20.36■□□□□ 0.85
POLR2F-209ENST00000483713 TAF1LQ8IZX4 1826 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms