RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 SCN11AQ9UI33 1791 aa20.04■□□□□ 0.8
CCM2-215ENST00000482714 PLSCR1O15162 318 aa20.03■□□□□ 0.8
CCM2-215ENST00000482714 HNRNPUQ00839 825 aaKnown RBP eCLIP20.03■□□□□ 0.8
CCM2-215ENST00000482714 ZNF521Q96K83 1311 aa20.02■□□□□ 0.8
CCM2-215ENST00000482714 BTBD11A6QL63 1104 aa20.02■□□□□ 0.8
CCM2-215ENST00000482714 CHL1O00533 1208 aa20.02■□□□□ 0.8
CCM2-215ENST00000482714 GNAI1P63096 354 aa20.02■□□□□ 0.8
CCM2-215ENST00000482714 SF3B2Q13435 895 aaKnown RBP20.02■□□□□ 0.8
CCM2-215ENST00000482714 IFT57Q9NWB7 429 aa20.02■□□□□ 0.8
CCM2-215ENST00000482714 SALL2Q9Y467 1007 aaPredicted RBP20.02■□□□□ 0.8
CCM2-215ENST00000482714 MRC1P22897 1456 aa20.01■□□□□ 0.79
CCM2-215ENST00000482714 ZNF853P0CG23 659 aa20■□□□□ 0.79
CCM2-215ENST00000482714 THUMPD2Q9BTF0 503 aaKnown RBP20■□□□□ 0.79
CCM2-215ENST00000482714 SBF2Q86WG5 1849 aa20■□□□□ 0.79
CCM2-215ENST00000482714 ZNF790Q6PG37 636 aa19.99■□□□□ 0.79
CCM2-215ENST00000482714 ATG3Q9NT62 314 aa19.99■□□□□ 0.79
CCM2-215ENST00000482714 APBA3O96018 575 aa19.99■□□□□ 0.79
CCM2-215ENST00000482714 GOLGA2Q08379 1002 aa19.99■□□□□ 0.79
CCM2-215ENST00000482714 TTC5Q8N0Z6 440 aa19.98■□□□□ 0.79
CCM2-215ENST00000482714 ZBED9Q6R2W3 1325 aa19.97■□□□□ 0.79
CCM2-215ENST00000482714 NHSQ6T4R5 1651 aa19.97■□□□□ 0.79
CCM2-215ENST00000482714 PTF1AQ7RTS3 328 aa19.97■□□□□ 0.79
CCM2-215ENST00000482714 TSPYL4Q9UJ04 414 aa19.97■□□□□ 0.79
CCM2-215ENST00000482714 ASAP1Q9ULH1 1129 aa19.97■□□□□ 0.79
CCM2-215ENST00000482714 ITGB4P16144 1822 aa19.97■□□□□ 0.79
CCM2-215ENST00000482714 BAG6P46379 1132 aa19.96■□□□□ 0.79
CCM2-215ENST00000482714 VSIG10Q8N0Z9 540 aa19.96■□□□□ 0.79
CCM2-215ENST00000482714 MYH16Q9H6N6 1097 aa19.96■□□□□ 0.79
CCM2-215ENST00000482714 DOT1LQ8TEK3 1739 aa19.95■□□□□ 0.78
CCM2-215ENST00000482714 TOGARAM1Q9Y4F4 1720 aa19.95■□□□□ 0.78
CCM2-215ENST00000482714 E9PSI1 815 aa19.95■□□□□ 0.78
CCM2-215ENST00000482714 SENP3-EIF4A1A0A087X0R7 540 aa19.94■□□□□ 0.78
CCM2-215ENST00000482714 SLC27A3Q5K4L6 730 aa19.94■□□□□ 0.78
CCM2-215ENST00000482714 TEX13AQ9BXU3 409 aaPredicted RBP19.94■□□□□ 0.78
CCM2-215ENST00000482714 VIRMAQ69YN4 1812 aaKnown RBP19.93■□□□□ 0.78
CCM2-215ENST00000482714 SLC39A6Q13433 755 aa19.93■□□□□ 0.78
CCM2-215ENST00000482714 FMNL2Q96PY5 1086 aa19.93■□□□□ 0.78
CCM2-215ENST00000482714 LAS1LQ9Y4W2 734 aaKnown RBP19.93■□□□□ 0.78
CCM2-215ENST00000482714 CHMP4AQ9BY43 222 aa19.92■□□□□ 0.78
CCM2-215ENST00000482714 MIS18AQ9NYP9 233 aa19.92■□□□□ 0.78
CCM2-215ENST00000482714 PALLDQ8WX93 1383 aa19.92■□□□□ 0.78
CCM2-215ENST00000482714 LOC102724428A0A0B4J2F2 783 aa19.92■□□□□ 0.78
CCM2-215ENST00000482714 SIK1P57059 783 aa19.92■□□□□ 0.78
CCM2-215ENST00000482714 EIF4A1P60842 406 aaKnown RBP19.92■□□□□ 0.78
CCM2-215ENST00000482714 SLFN5Q08AF3 891 aa19.92■□□□□ 0.78
CCM2-215ENST00000482714 TRMT2AQ8IZ69 625 aaKnown RBP19.92■□□□□ 0.78
CCM2-215ENST00000482714 MBIPQ9NS73 344 aa19.92■□□□□ 0.78
CCM2-215ENST00000482714 SOS1Q07889 1333 aaPredicted RBP19.91■□□□□ 0.78
CCM2-215ENST00000482714 SIPA1L3O60292 1781 aaPredicted RBP19.91■□□□□ 0.78
CCM2-215ENST00000482714 SNRPA1P09661 255 aaKnown RBP19.9■□□□□ 0.78
CCM2-215ENST00000482714 ZNF496Q96IT1 587 aaPredicted RBP19.9■□□□□ 0.78
CCM2-215ENST00000482714 CAMKK2Q96RR4 588 aa19.9■□□□□ 0.78
CCM2-215ENST00000482714 BTAF1O14981 1849 aa19.89■□□□□ 0.78
CCM2-215ENST00000482714 KCNQ3O43525 872 aa19.89■□□□□ 0.77
CCM2-215ENST00000482714 PTCD1O75127 700 aaKnown RBP19.89■□□□□ 0.77
CCM2-215ENST00000482714 RBM42Q9BTD8 480 aaKnown RBP19.89■□□□□ 0.77
CCM2-215ENST00000482714 HEG1Q9ULI3 1381 aa19.89■□□□□ 0.77
CCM2-215ENST00000482714 HOXB7P09629 217 aa19.88■□□□□ 0.77
CCM2-215ENST00000482714 ATP6V1AP38606 617 aa19.88■□□□□ 0.77
CCM2-215ENST00000482714 TXNRD1Q16881 649 aa19.88■□□□□ 0.77
CCM2-215ENST00000482714 GIGYF1O75420 1035 aaPredicted RBP19.87■□□□□ 0.77
CCM2-215ENST00000482714 PROM2Q8N271 834 aa19.87■□□□□ 0.77
CCM2-215ENST00000482714 SPINK5Q9NQ38 1064 aaPredicted RBP19.87■□□□□ 0.77
CCM2-215ENST00000482714 CCNL1Q9UK58 526 aaPredicted RBP19.87■□□□□ 0.77
CCM2-215ENST00000482714 EN1Q05925 392 aaPredicted RBP19.86■□□□□ 0.77
CCM2-215ENST00000482714 STARD3NLO95772 234 aa19.86■□□□□ 0.77
CCM2-215ENST00000482714 DEFB132Q7Z7B7 95 aa19.85■□□□□ 0.77
CCM2-215ENST00000482714 CDCA7LQ96GN5 454 aa19.85■□□□□ 0.77
CCM2-215ENST00000482714 SLC4A9Q96Q91 983 aa19.85■□□□□ 0.77
CCM2-215ENST00000482714 FANCIQ9NVI1 1328 aa19.85■□□□□ 0.77
CCM2-215ENST00000482714 RC3H1Q5TC82 1133 aaKnown RBP19.84■□□□□ 0.77
CCM2-215ENST00000482714 DUSP27Q5VZP5 1158 aa19.84■□□□□ 0.77
CCM2-215ENST00000482714 TNS1Q9HBL0 1735 aaKnown RBP19.84■□□□□ 0.77
CCM2-215ENST00000482714 ZNF831Q5JPB2 1677 aa19.83■□□□□ 0.77
CCM2-215ENST00000482714 PAPPAQ13219 1627 aa19.83■□□□□ 0.77
CCM2-215ENST00000482714 CT47B1P0C2W7 299 aaPredicted RBP19.83■□□□□ 0.76
CCM2-215ENST00000482714 EZH2Q15910 746 aaKnown RBP19.83■□□□□ 0.76
CCM2-215ENST00000482714 TSR2Q969E8 191 aaKnown RBP19.83■□□□□ 0.76
CCM2-215ENST00000482714 RGPD3A6NKT7 1758 aaPredicted RBP19.83■□□□□ 0.76
CCM2-215ENST00000482714 KDM3BQ7LBC6 1761 aa19.83■□□□□ 0.76
CCM2-215ENST00000482714 RGPD4Q7Z3J3 1758 aa19.83■□□□□ 0.76
CCM2-215ENST00000482714 KCPQ6ZWJ8 1503 aa19.82■□□□□ 0.76
CCM2-215ENST00000482714 ZNF428Q96B54 188 aa19.82■□□□□ 0.76
CCM2-215ENST00000482714 UBR2Q8IWV8 1755 aa19.81■□□□□ 0.76
CCM2-215ENST00000482714 LY75O60449 1722 aa19.81■□□□□ 0.76
CCM2-215ENST00000482714 LRRC4BQ9NT99 713 aa19.81■□□□□ 0.76
CCM2-215ENST00000482714 EXOSC9Q06265 439 aaKnown RBP19.8■□□□□ 0.76
CCM2-215ENST00000482714 ITPK1Q13572 414 aa19.8■□□□□ 0.76
CCM2-215ENST00000482714 DNAJC10Q8IXB1 793 aa19.8■□□□□ 0.76
CCM2-215ENST00000482714 C8orf58Q8NAV2 365 aa19.8■□□□□ 0.76
CCM2-215ENST00000482714 USP16Q9Y5T5 823 aa19.8■□□□□ 0.76
CCM2-215ENST00000482714 ERBB4Q15303 1308 aa19.8■□□□□ 0.76
CCM2-215ENST00000482714 VAMP4O75379 141 aa19.79■□□□□ 0.76
CCM2-215ENST00000482714 CYP19A1P11511 503 aaPredicted RBP19.79■□□□□ 0.76
CCM2-215ENST00000482714 TWISTNBQ3B726 338 aaPredicted RBP19.79■□□□□ 0.76
CCM2-215ENST00000482714 YTHDC1Q96MU7 727 aaKnown RBP19.79■□□□□ 0.76
CCM2-215ENST00000482714 SRCAPQ6ZRS2 3230 aa19.79■□□□□ 0.76
CCM2-215ENST00000482714 CNTNAP4Q9C0A0 1308 aa19.78■□□□□ 0.76
CCM2-215ENST00000482714 NBPF14Q5TI25 921 aa19.78■□□□□ 0.76
CCM2-215ENST00000482714 CCDC30Q5VVM6 783 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms