RNA–Protein interactions for RNA: ENST00000482017.1

MCF2L2-211, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 4

Gene MCF2L2, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-211ENST00000482017 HTATSF1O43719 755 aaKnown RBP24.66■■□□□ 1.54
MCF2L2-211ENST00000482017 LMOD3Q0VAK6 560 aa24.66■■□□□ 1.54
MCF2L2-211ENST00000482017 BAG6P46379 1132 aa24.65■■□□□ 1.54
MCF2L2-211ENST00000482017 EN1Q05925 392 aaPredicted RBP24.65■■□□□ 1.54
MCF2L2-211ENST00000482017 TRIM35Q9UPQ4 493 aa24.65■■□□□ 1.54
MCF2L2-211ENST00000482017 CEMIPQ8WUJ3 1361 aa24.65■■□□□ 1.54
MCF2L2-211ENST00000482017 SOCS7O14512 581 aa24.63■■□□□ 1.53
MCF2L2-211ENST00000482017 CCDC125Q86Z20 511 aa24.63■■□□□ 1.53
MCF2L2-211ENST00000482017 ASAP1Q9ULH1 1129 aa24.63■■□□□ 1.53
MCF2L2-211ENST00000482017 SLC39A6Q13433 755 aa24.62■■□□□ 1.53
MCF2L2-211ENST00000482017 PAPPAQ13219 1627 aa24.61■■□□□ 1.53
MCF2L2-211ENST00000482017 LY75O60449 1722 aa24.61■■□□□ 1.53
MCF2L2-211ENST00000482017 PALLDQ8WX93 1383 aa24.61■■□□□ 1.53
MCF2L2-211ENST00000482017 EZH2Q15910 746 aaKnown RBP24.6■■□□□ 1.53
MCF2L2-211ENST00000482017 ATG3Q9NT62 314 aa24.6■■□□□ 1.53
MCF2L2-211ENST00000482017 LAS1LQ9Y4W2 734 aaKnown RBP24.6■■□□□ 1.53
MCF2L2-211ENST00000482017 RGPD3A6NKT7 1758 aaPredicted RBP24.59■■□□□ 1.53
MCF2L2-211ENST00000482017 RGPD4Q7Z3J3 1758 aa24.59■■□□□ 1.53
MCF2L2-211ENST00000482017 MIS18AQ9NYP9 233 aa24.59■■□□□ 1.53
MCF2L2-211ENST00000482017 BTBD11A6QL63 1104 aa24.58■■□□□ 1.53
MCF2L2-211ENST00000482017 KCNQ4P56696 695 aa24.58■■□□□ 1.53
MCF2L2-211ENST00000482017 SMARCC1Q92922 1105 aaPredicted RBP24.58■■□□□ 1.53
MCF2L2-211ENST00000482017 RBM42Q9BTD8 480 aaKnown RBP24.58■■□□□ 1.53
MCF2L2-211ENST00000482017 RREB1Q92766 1687 aa24.57■■□□□ 1.52
MCF2L2-211ENST00000482017 KDM3BQ7LBC6 1761 aa24.57■■□□□ 1.52
MCF2L2-211ENST00000482017 KCNQ3O43525 872 aa24.56■■□□□ 1.52
MCF2L2-211ENST00000482017 PTCD1O75127 700 aaKnown RBP24.56■■□□□ 1.52
MCF2L2-211ENST00000482017 TAF7Q15545 349 aaPredicted RBP24.56■■□□□ 1.52
MCF2L2-211ENST00000482017 UBR2Q8IWV8 1755 aa24.55■■□□□ 1.52
MCF2L2-211ENST00000482017 TTC5Q8N0Z6 440 aa24.55■■□□□ 1.52
MCF2L2-211ENST00000482017 CAMKK2Q96RR4 588 aa24.55■■□□□ 1.52
MCF2L2-211ENST00000482017 NUP188Q5SRE5 1749 aa24.55■■□□□ 1.52
MCF2L2-211ENST00000482017 PLSCR1O15162 318 aa24.54■■□□□ 1.52
MCF2L2-211ENST00000482017 TXNRD1Q16881 649 aa24.54■■□□□ 1.52
MCF2L2-211ENST00000482017 WWC1Q8IX03 1113 aa24.53■■□□□ 1.52
MCF2L2-211ENST00000482017 CCNL1Q9UK58 526 aaPredicted RBP24.53■■□□□ 1.52
MCF2L2-211ENST00000482017 TAF1LQ8IZX4 1826 aa24.53■■□□□ 1.52
MCF2L2-211ENST00000482017 KCPQ6ZWJ8 1503 aa24.52■■□□□ 1.52
MCF2L2-211ENST00000482017 HNRNPUQ00839 825 aaKnown RBP eCLIP24.52■■□□□ 1.52
MCF2L2-211ENST00000482017 TSPYL4Q9UJ04 414 aa24.52■■□□□ 1.52
MCF2L2-211ENST00000482017 CCDC27Q2M243 656 aa24.51■■□□□ 1.51
MCF2L2-211ENST00000482017 ZNF790Q6PG37 636 aa24.51■■□□□ 1.51
MCF2L2-211ENST00000482017 PROM2Q8N271 834 aa24.51■■□□□ 1.51
MCF2L2-211ENST00000482017 C5P01031 1676 aa24.5■■□□□ 1.51
MCF2L2-211ENST00000482017 LOC102724428A0A0B4J2F2 783 aa24.5■■□□□ 1.51
MCF2L2-211ENST00000482017 SIK1P57059 783 aa24.5■■□□□ 1.51
MCF2L2-211ENST00000482017 TJP1Q07157 1748 aa24.49■■□□□ 1.51
MCF2L2-211ENST00000482017 ATP6V1AP38606 617 aa24.49■■□□□ 1.51
MCF2L2-211ENST00000482017 CALD1Q05682 793 aaKnown RBP24.49■■□□□ 1.51
MCF2L2-211ENST00000482017 LRRC4BQ9NT99 713 aa24.49■■□□□ 1.51
MCF2L2-211ENST00000482017 ZNF496Q96IT1 587 aaPredicted RBP24.48■■□□□ 1.51
MCF2L2-211ENST00000482017 SLC4A9Q96Q91 983 aa24.47■■□□□ 1.51
MCF2L2-211ENST00000482017 GNAI1P63096 354 aa24.45■■□□□ 1.5
MCF2L2-211ENST00000482017 ITPK1Q13572 414 aa24.45■■□□□ 1.5
MCF2L2-211ENST00000482017 SLC27A3Q5K4L6 730 aa24.45■■□□□ 1.5
MCF2L2-211ENST00000482017 NGEFQ8N5V2 710 aa24.45■■□□□ 1.5
MCF2L2-211ENST00000482017 FMNL2Q96PY5 1086 aa24.45■■□□□ 1.5
MCF2L2-211ENST00000482017 IFT57Q9NWB7 429 aa24.45■■□□□ 1.5
MCF2L2-211ENST00000482017 COL5A3P25940 1745 aaPredicted RBP24.44■■□□□ 1.5
MCF2L2-211ENST00000482017 CHL1O00533 1208 aa24.44■■□□□ 1.5
MCF2L2-211ENST00000482017 NCBP3Q53F19 620 aaKnown RBP24.44■■□□□ 1.5
MCF2L2-211ENST00000482017 DNAJC10Q8IXB1 793 aa24.44■■□□□ 1.5
MCF2L2-211ENST00000482017 TSR2Q969E8 191 aaKnown RBP24.44■■□□□ 1.5
MCF2L2-211ENST00000482017 CFAP44Q96MT7 982 aa24.44■■□□□ 1.5
MCF2L2-211ENST00000482017 MBIPQ9NS73 344 aa24.44■■□□□ 1.5
MCF2L2-211ENST00000482017 HEG1Q9ULI3 1381 aa24.43■■□□□ 1.5
MCF2L2-211ENST00000482017 ZNF831Q5JPB2 1677 aa24.43■■□□□ 1.5
MCF2L2-211ENST00000482017 C4BP0C0L5 1744 aa24.42■■□□□ 1.5
MCF2L2-211ENST00000482017 WDR63Q8IWG1 891 aa24.42■■□□□ 1.5
MCF2L2-211ENST00000482017 LINC00116Q8NCU8 138 aa24.42■■□□□ 1.5
MCF2L2-211ENST00000482017 TUBGCP6Q96RT7 1819 aa24.42■■□□□ 1.5
MCF2L2-211ENST00000482017 PRAMEF22A3QJZ6 481 aa24.41■■□□□ 1.5
MCF2L2-211ENST00000482017 ZNF853P0CG23 659 aa24.41■■□□□ 1.5
MCF2L2-211ENST00000482017 EIF4A1P60842 406 aaKnown RBP24.41■■□□□ 1.5
MCF2L2-211ENST00000482017 KRT24Q2M2I5 525 aa24.41■■□□□ 1.5
MCF2L2-211ENST00000482017 YTHDC1Q96MU7 727 aaKnown RBP24.41■■□□□ 1.5
MCF2L2-211ENST00000482017 ANO8Q9HCE9 1232 aaPredicted RBP24.41■■□□□ 1.5
MCF2L2-211ENST00000482017 SPINK5Q9NQ38 1064 aaPredicted RBP24.41■■□□□ 1.5
MCF2L2-211ENST00000482017 MYH14Q7Z406 1995 aaKnown RBP24.41■■□□□ 1.5
MCF2L2-211ENST00000482017 LAMB4A4D0S4 1761 aa24.41■■□□□ 1.5
MCF2L2-211ENST00000482017 ZNF521Q96K83 1311 aa24.4■■□□□ 1.5
MCF2L2-211ENST00000482017 BABAM1Q9NWV8 329 aa24.4■■□□□ 1.5
MCF2L2-211ENST00000482017 CICQ96RK0 1608 aaPredicted RBP24.39■■□□□ 1.5
MCF2L2-211ENST00000482017 IL16Q14005 1332 aa24.39■■□□□ 1.5
MCF2L2-211ENST00000482017 ZNF827Q17R98 1081 aa24.38■■□□□ 1.49
MCF2L2-211ENST00000482017 STK32BQ9NY57 414 aa24.38■■□□□ 1.49
MCF2L2-211ENST00000482017 SNRPA1P09661 255 aaKnown RBP24.37■■□□□ 1.49
MCF2L2-211ENST00000482017 GOLGA2Q08379 1002 aa24.37■■□□□ 1.49
MCF2L2-211ENST00000482017 NBPF14Q5TI25 921 aa24.37■■□□□ 1.49
MCF2L2-211ENST00000482017 FANCIQ9NVI1 1328 aa24.36■■□□□ 1.49
MCF2L2-211ENST00000482017 VSIG10Q8N0Z9 540 aa24.36■■□□□ 1.49
MCF2L2-211ENST00000482017 CDCA7LQ96GN5 454 aa24.36■■□□□ 1.49
MCF2L2-211ENST00000482017 AK7Q96M32 723 aa24.36■■□□□ 1.49
MCF2L2-211ENST00000482017 UBR3Q6ZT12 1888 aa24.35■■□□□ 1.49
MCF2L2-211ENST00000482017 ELL2O00472 640 aaPredicted RBP24.35■■□□□ 1.49
MCF2L2-211ENST00000482017 USP16Q9Y5T5 823 aa24.35■■□□□ 1.49
MCF2L2-211ENST00000482017 CRKLP46109 303 aaKnown RBP24.34■■□□□ 1.49
MCF2L2-211ENST00000482017 SMIM5Q71RC9 77 aa24.34■■□□□ 1.49
MCF2L2-211ENST00000482017 NECTIN2Q92692 538 aa24.34■■□□□ 1.49
MCF2L2-211ENST00000482017 MYH16Q9H6N6 1097 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms