RNA–Protein interactions for RNA: ENST00000480358.6

SFXN2-203, Transcript of sideroflexin 2, humanhuman

TSL 5

Gene SFXN2, Length 2,315 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-203ENST00000480358 TSPYL4Q9UJ04 414 aa18.13■□□□□ 0.49
SFXN2-203ENST00000480358 SEPT12Q8IYM1 358 aa18.12■□□□□ 0.49
SFXN2-203ENST00000480358 MIS18AQ9NYP9 233 aa18.12■□□□□ 0.49
SFXN2-203ENST00000480358 CABP4P57796 275 aa18.12■□□□□ 0.49
SFXN2-203ENST00000480358 NFATC2IPQ8NCF5 419 aa18.12■□□□□ 0.49
SFXN2-203ENST00000480358 TOGARAM1Q9Y4F4 1720 aa18.12■□□□□ 0.49
SFXN2-203ENST00000480358 RGS17Q9UGC6 210 aaPredicted RBP18.11■□□□□ 0.49
SFXN2-203ENST00000480358 BTBD11A6QL63 1104 aa18.11■□□□□ 0.49
SFXN2-203ENST00000480358 KDM3BQ7LBC6 1761 aa18.1■□□□□ 0.49
SFXN2-203ENST00000480358 EXOSC9Q06265 439 aaKnown RBP18.1■□□□□ 0.49
SFXN2-203ENST00000480358 RXRBP28702 533 aa18.09■□□□□ 0.49
SFXN2-203ENST00000480358 DOT1LQ8TEK3 1739 aa18.08■□□□□ 0.49
SFXN2-203ENST00000480358 ITGB4P16144 1822 aa18.08■□□□□ 0.48
SFXN2-203ENST00000480358 CT47B1P0C2W7 299 aaPredicted RBP18.07■□□□□ 0.48
SFXN2-203ENST00000480358 TMOD3Q9NYL9 352 aa18.07■□□□□ 0.48
SFXN2-203ENST00000480358 POTEAQ6S8J7 498 aa18.06■□□□□ 0.48
SFXN2-203ENST00000480358 ZNF790Q6PG37 636 aa18.05■□□□□ 0.48
SFXN2-203ENST00000480358 RCAN3Q9UKA8 241 aa18.05■□□□□ 0.48
SFXN2-203ENST00000480358 KAT6BQ8WYB5 2073 aa18.05■□□□□ 0.48
SFXN2-203ENST00000480358 BRWD3Q6RI45 1802 aa18.05■□□□□ 0.48
SFXN2-203ENST00000480358 C8orf58Q8NAV2 365 aa18.05■□□□□ 0.48
SFXN2-203ENST00000480358 BCL9O00512 1426 aa18.05■□□□□ 0.48
SFXN2-203ENST00000480358 KCNQ3O43525 872 aa18.04■□□□□ 0.48
SFXN2-203ENST00000480358 PRIM1P49642 420 aaKnown RBP18.04■□□□□ 0.48
SFXN2-203ENST00000480358 EIF4A1P60842 406 aaKnown RBP18.04■□□□□ 0.48
SFXN2-203ENST00000480358 TWISTNBQ3B726 338 aaPredicted RBP18.04■□□□□ 0.48
SFXN2-203ENST00000480358 PIGBQ92521 554 aa18.04■□□□□ 0.48
SFXN2-203ENST00000480358 SYTL4Q96C24 671 aaPredicted RBP18.04■□□□□ 0.48
SFXN2-203ENST00000480358 PAPPAQ13219 1627 aa18.03■□□□□ 0.48
SFXN2-203ENST00000480358 SLC39A6Q13433 755 aa18.03■□□□□ 0.48
SFXN2-203ENST00000480358 KRT27Q7Z3Y8 459 aa18.03■□□□□ 0.48
SFXN2-203ENST00000480358 TTC5Q8N0Z6 440 aa18.03■□□□□ 0.48
SFXN2-203ENST00000480358 TSPYL6Q8N831 410 aa18.03■□□□□ 0.48
SFXN2-203ENST00000480358 KRT24Q2M2I5 525 aa18.03■□□□□ 0.48
SFXN2-203ENST00000480358 ELL2O00472 640 aaPredicted RBP18.02■□□□□ 0.48
SFXN2-203ENST00000480358 VAMP4O75379 141 aa18.02■□□□□ 0.48
SFXN2-203ENST00000480358 ZNF428Q96B54 188 aa18.02■□□□□ 0.48
SFXN2-203ENST00000480358 ACSBG1Q96GR2 724 aa18.02■□□□□ 0.48
SFXN2-203ENST00000480358 SOS1Q07889 1333 aaPredicted RBP18.02■□□□□ 0.47
SFXN2-203ENST00000480358 FAM182BQ5T319 152 aa18.01■□□□□ 0.47
SFXN2-203ENST00000480358 RGS12O14924 1447 aa18.01■□□□□ 0.47
SFXN2-203ENST00000480358 UBR2Q8IWV8 1755 aa18.01■□□□□ 0.47
SFXN2-203ENST00000480358 HEG1Q9ULI3 1381 aa18■□□□□ 0.47
SFXN2-203ENST00000480358 RARSP54136 660 aaKnown RBP17.99■□□□□ 0.47
SFXN2-203ENST00000480358 FMNL2Q96PY5 1086 aa17.99■□□□□ 0.47
SFXN2-203ENST00000480358 HOXB7P09629 217 aa17.99■□□□□ 0.47
SFXN2-203ENST00000480358 ZNF496Q96IT1 587 aaPredicted RBP17.99■□□□□ 0.47
SFXN2-203ENST00000480358 SUPT16HQ9Y5B9 1047 aaKnown RBP17.99■□□□□ 0.47
SFXN2-203ENST00000480358 NHSQ6T4R5 1651 aa17.99■□□□□ 0.47
SFXN2-203ENST00000480358 FAM196AQ6ZSG2 479 aa17.98■□□□□ 0.47
SFXN2-203ENST00000480358 ASAP1Q9ULH1 1129 aa17.98■□□□□ 0.47
SFXN2-203ENST00000480358 SBF2Q86WG5 1849 aa17.98■□□□□ 0.47
SFXN2-203ENST00000480358 KCPQ6ZWJ8 1503 aa17.98■□□□□ 0.47
SFXN2-203ENST00000480358 KCNQ2O43526 872 aa17.98■□□□□ 0.47
SFXN2-203ENST00000480358 GIGYF1O75420 1035 aaPredicted RBP17.98■□□□□ 0.47
SFXN2-203ENST00000480358 ATG3Q9NT62 314 aa17.98■□□□□ 0.47
SFXN2-203ENST00000480358 ALDH1L2Q3SY69 923 aa17.97■□□□□ 0.47
SFXN2-203ENST00000480358 PELP1Q8IZL8 1130 aaKnown RBP17.97■□□□□ 0.47
SFXN2-203ENST00000480358 EP400Q96L91 3159 aa17.96■□□□□ 0.47
SFXN2-203ENST00000480358 CHMP4AQ9BY43 222 aa17.96■□□□□ 0.47
SFXN2-203ENST00000480358 SSH1Q8WYL5 1049 aa17.95■□□□□ 0.46
SFXN2-203ENST00000480358 PTCD1O75127 700 aaKnown RBP17.95■□□□□ 0.46
SFXN2-203ENST00000480358 BCAR3O75815 825 aa17.95■□□□□ 0.46
SFXN2-203ENST00000480358 SNRPA1P09661 255 aaKnown RBP17.95■□□□□ 0.46
SFXN2-203ENST00000480358 SMC4Q9NTJ3 1288 aa17.94■□□□□ 0.46
SFXN2-203ENST00000480358 CCDC30Q5VVM6 783 aa17.94■□□□□ 0.46
SFXN2-203ENST00000480358 BCL2L13Q9BXK5 485 aa17.94■□□□□ 0.46
SFXN2-203ENST00000480358 C5P01031 1676 aa17.94■□□□□ 0.46
SFXN2-203ENST00000480358 RNF123Q5XPI4 1314 aa17.94■□□□□ 0.46
SFXN2-203ENST00000480358 BTAF1O14981 1849 aa17.93■□□□□ 0.46
SFXN2-203ENST00000480358 HDGFL1Q5TGJ6 251 aa17.93■□□□□ 0.46
SFXN2-203ENST00000480358 SMARCC1Q92922 1105 aaPredicted RBP17.93■□□□□ 0.46
SFXN2-203ENST00000480358 VSIG10Q8N0Z9 540 aa17.93■□□□□ 0.46
SFXN2-203ENST00000480358 PRAMEF22A3QJZ6 481 aa17.92■□□□□ 0.46
SFXN2-203ENST00000480358 BCL11BQ9C0K0 894 aaPredicted RBP17.92■□□□□ 0.46
SFXN2-203ENST00000480358 EIF2S2P20042 333 aaKnown RBP17.92■□□□□ 0.46
SFXN2-203ENST00000480358 BRPF1P55201 1214 aaPredicted RBP17.92■□□□□ 0.46
SFXN2-203ENST00000480358 RRP1P56182 461 aaKnown RBP17.92■□□□□ 0.46
SFXN2-203ENST00000480358 PTF1AQ7RTS3 328 aa17.92■□□□□ 0.46
SFXN2-203ENST00000480358 RBM42Q9BTD8 480 aaKnown RBP17.92■□□□□ 0.46
SFXN2-203ENST00000480358 LAMB4A4D0S4 1761 aa17.92■□□□□ 0.46
SFXN2-203ENST00000480358 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.91■□□□□ 0.46
SFXN2-203ENST00000480358 STK31Q9BXU1 1019 aa17.91■□□□□ 0.46
SFXN2-203ENST00000480358 PALLDQ8WX93 1383 aa17.91■□□□□ 0.46
SFXN2-203ENST00000480358 TCERG1O14776 1098 aaKnown RBP17.9■□□□□ 0.46
SFXN2-203ENST00000480358 MRPL50Q8N5N7 158 aaKnown RBP17.9■□□□□ 0.46
SFXN2-203ENST00000480358 NECTIN2Q92692 538 aa17.9■□□□□ 0.46
SFXN2-203ENST00000480358 CACNA1FO60840 1977 aa17.9■□□□□ 0.46
SFXN2-203ENST00000480358 KIF16BQ96L93 1317 aa17.9■□□□□ 0.46
SFXN2-203ENST00000480358 TEX13AQ9BXU3 409 aaPredicted RBP17.89■□□□□ 0.46
SFXN2-203ENST00000480358 USP16Q9Y5T5 823 aa17.89■□□□□ 0.46
SFXN2-203ENST00000480358 SLC4A2P04920 1241 aa17.88■□□□□ 0.45
SFXN2-203ENST00000480358 LOC102724428A0A0B4J2F2 783 aa17.88■□□□□ 0.45
SFXN2-203ENST00000480358 TRIM37O94972 964 aa17.88■□□□□ 0.45
SFXN2-203ENST00000480358 SIK1P57059 783 aa17.88■□□□□ 0.45
SFXN2-203ENST00000480358 FRAT1Q92837 279 aaPredicted RBP17.88■□□□□ 0.45
SFXN2-203ENST00000480358 PLIN1O60240 522 aa17.87■□□□□ 0.45
SFXN2-203ENST00000480358 CANXP27824 592 aaKnown RBP17.87■□□□□ 0.45
SFXN2-203ENST00000480358 SLC4A9Q96Q91 983 aa17.87■□□□□ 0.45
SFXN2-203ENST00000480358 CHPF2Q9P2E5 772 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms