RNA–Protein interactions for RNA: ENST00000480358.6

SFXN2-203, Transcript of sideroflexin 2, humanhuman

TSL 5

Gene SFXN2, Length 2,315 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-203ENST00000480358 NISCHQ9Y2I1 1504 aa32.67■■■□□ 2.82
SFXN2-203ENST00000480358 CCDC180Q9P1Z9 1646 aa28.76■■■□□ 2.19
SFXN2-203ENST00000480358 ABCC9O60706 1549 aa27.51■■□□□ 1.99
SFXN2-203ENST00000480358 ZCCHC6Q5VYS8 1495 aaKnown RBP27.36■■□□□ 1.97
SFXN2-203ENST00000480358 DCAF1Q9Y4B6 1507 aa27.06■■□□□ 1.92
SFXN2-203ENST00000480358 DCAF8L2P0C7V8 631 aa27.06■■□□□ 1.92
SFXN2-203ENST00000480358 MYO15BQ96JP2 1530 aa26.93■■□□□ 1.9
SFXN2-203ENST00000480358 NACADO15069 1562 aa26.88■■□□□ 1.89
SFXN2-203ENST00000480358 RB1CC1Q8TDY2 1594 aa26.75■■□□□ 1.87
SFXN2-203ENST00000480358 SCRIBQ14160 1630 aa26.3■■□□□ 1.8
SFXN2-203ENST00000480358 SHROOM4Q9ULL8 1493 aa26.23■■□□□ 1.79
SFXN2-203ENST00000480358 UNC13AQ9UPW8 1703 aa26.17■■□□□ 1.78
SFXN2-203ENST00000480358 BICRAQ9NZM4 1560 aa25.91■■□□□ 1.74
SFXN2-203ENST00000480358 PABPN1Q86U42 306 aaKnown RBP eCLIP25.82■■□□□ 1.72
SFXN2-203ENST00000480358 CECR2Q9BXF3 1484 aa25.38■■□□□ 1.65
SFXN2-203ENST00000480358 BAZ1AQ9NRL2 1556 aaPredicted RBP25.29■■□□□ 1.64
SFXN2-203ENST00000480358 SMARCA4P51532 1647 aa25.22■■□□□ 1.63
SFXN2-203ENST00000480358 MROH2BQ7Z745 1585 aa25.19■■□□□ 1.62
SFXN2-203ENST00000480358 EIF4G1Q04637 1599 aaKnown RBP25.18■■□□□ 1.62
SFXN2-203ENST00000480358 RSF1Q96T23 1441 aaPredicted RBP25.15■■□□□ 1.62
SFXN2-203ENST00000480358 SUPT5HO00267 1087 aaKnown RBP25.03■■□□□ 1.6
SFXN2-203ENST00000480358 WIZO95785 1651 aa24.97■■□□□ 1.59
SFXN2-203ENST00000480358 PEG3Q9GZU2 1588 aa24.96■■□□□ 1.59
SFXN2-203ENST00000480358 CC2D2AQ9P2K1 1620 aa24.92■■□□□ 1.58
SFXN2-203ENST00000480358 SMARCA2P51531 1590 aa24.91■■□□□ 1.58
SFXN2-203ENST00000480358 ATAD2BQ9ULI0 1458 aa24.91■■□□□ 1.58
SFXN2-203ENST00000480358 NCAPD3P42695 1498 aa24.79■■□□□ 1.56
SFXN2-203ENST00000480358 BAZ1BQ9UIG0 1483 aaKnown RBP24.75■■□□□ 1.55
SFXN2-203ENST00000480358 HMGXB3Q12766 1538 aa24.74■■□□□ 1.55
SFXN2-203ENST00000480358 TOP2AP11388 1531 aaKnown RBP24.73■■□□□ 1.55
SFXN2-203ENST00000480358 DNAJC5BQ9UF47 199 aa24.64■■□□□ 1.54
SFXN2-203ENST00000480358 CCDC88BA6NC98 1476 aa24.44■■□□□ 1.5
SFXN2-203ENST00000480358 CFTRP13569 1480 aa24.11■■□□□ 1.45
SFXN2-203ENST00000480358 CADPSQ9ULU8 1353 aa24.11■■□□□ 1.45
SFXN2-203ENST00000480358 LAMC3Q9Y6N6 1575 aa24.04■■□□□ 1.44
SFXN2-203ENST00000480358 NESP48681 1621 aa24■■□□□ 1.43
SFXN2-203ENST00000480358 PRDM2Q13029 1718 aa23.99■■□□□ 1.43
SFXN2-203ENST00000480358 PDS5BQ9NTI5 1447 aa23.86■■□□□ 1.41
SFXN2-203ENST00000480358 FANCD2Q9BXW9 1451 aa23.84■■□□□ 1.41
SFXN2-203ENST00000480358 ABCC8Q09428 1581 aa23.76■■□□□ 1.39
SFXN2-203ENST00000480358 KIF21AQ7Z4S6 1674 aa23.75■■□□□ 1.39
SFXN2-203ENST00000480358 CEP164Q9UPV0 1460 aa23.74■■□□□ 1.39
SFXN2-203ENST00000480358 CHIC1Q5VXU3 224 aa23.73■■□□□ 1.39
SFXN2-203ENST00000480358 WRNQ14191 1432 aaPredicted RBP eCLIP23.69■■□□□ 1.38
SFXN2-203ENST00000480358 ERCC6Q03468 1493 aa23.67■■□□□ 1.38
SFXN2-203ENST00000480358 TRIM41Q8WV44 630 aa23.61■■□□□ 1.37
SFXN2-203ENST00000480358 SYNJ1O43426 1573 aa23.6■■□□□ 1.37
SFXN2-203ENST00000480358 CUX1P39880 1505 aa23.59■■□□□ 1.37
SFXN2-203ENST00000480358 TOP2BQ02880 1626 aa23.57■■□□□ 1.36
SFXN2-203ENST00000480358 MRC2Q9UBG0 1479 aa23.56■■□□□ 1.36
SFXN2-203ENST00000480358 BIVM-ERCC5R4GMW8 1640 aa23.56■■□□□ 1.36
SFXN2-203ENST00000480358 DNMBPQ6XZF7 1577 aa23.56■■□□□ 1.36
SFXN2-203ENST00000480358 URB2Q14146 1524 aaKnown RBP23.55■■□□□ 1.36
SFXN2-203ENST00000480358 TOPBP1Q92547 1522 aa23.53■■□□□ 1.36
SFXN2-203ENST00000480358 THOC2Q8NI27 1593 aaKnown RBP23.49■■□□□ 1.35
SFXN2-203ENST00000480358 WDR62O43379 1518 aa23.47■■□□□ 1.35
SFXN2-203ENST00000480358 FGD5Q6ZNL6 1462 aa23.41■■□□□ 1.34
SFXN2-203ENST00000480358 POLA1P09884 1462 aaPredicted RBP23.37■■□□□ 1.33
SFXN2-203ENST00000480358 SOGA1O94964 1423 aa23.29■■□□□ 1.32
SFXN2-203ENST00000480358 CUX2O14529 1486 aa23.27■■□□□ 1.31
SFXN2-203ENST00000480358 RAD54L2Q9Y4B4 1467 aa23.27■■□□□ 1.31
SFXN2-203ENST00000480358 TARBP1Q13395 1621 aaKnown RBP23.22■■□□□ 1.31
SFXN2-203ENST00000480358 ABCA10Q8WWZ4 1543 aa23.22■■□□□ 1.31
SFXN2-203ENST00000480358 IFT140Q96RY7 1462 aa23.21■■□□□ 1.31
SFXN2-203ENST00000480358 WDR97A6NE52 1622 aa23.19■■□□□ 1.3
SFXN2-203ENST00000480358 KIF27Q86VH2 1401 aa23.15■■□□□ 1.3
SFXN2-203ENST00000480358 EEA1Q15075 1411 aa23.14■■□□□ 1.3
SFXN2-203ENST00000480358 RUSC2Q8N2Y8 1516 aa23.14■■□□□ 1.29
SFXN2-203ENST00000480358 FAM9AQ8IZU1 332 aaPredicted RBP23.1■■□□□ 1.29
SFXN2-203ENST00000480358 TDRD9Q8NDG6 1382 aaKnown RBP23.08■■□□□ 1.29
SFXN2-203ENST00000480358 ABCA5Q8WWZ7 1642 aa23.07■■□□□ 1.28
SFXN2-203ENST00000480358 ZNF608Q9ULD9 1512 aaPredicted RBP23.06■■□□□ 1.28
SFXN2-203ENST00000480358 GAPVD1Q14C86 1478 aa23.04■■□□□ 1.28
SFXN2-203ENST00000480358 CSRNP3Q8WYN3 585 aa23.02■■□□□ 1.28
SFXN2-203ENST00000480358 AQRO60306 1485 aaKnown RBP eCLIP23.01■■□□□ 1.274e-7■■■■■ 31.4
SFXN2-203ENST00000480358 EIF4G3O43432 1585 aaKnown RBP23■■□□□ 1.27
SFXN2-203ENST00000480358 IGF1RP08069 1367 aa22.97■■□□□ 1.27
SFXN2-203ENST00000480358 ERICH3Q5RHP9 1530 aa22.96■■□□□ 1.27
SFXN2-203ENST00000480358 PBRM1Q86U86 1689 aa22.95■■□□□ 1.26
SFXN2-203ENST00000480358 GRIN2BQ13224 1484 aa22.94■■□□□ 1.26
SFXN2-203ENST00000480358 CUL7Q14999 1698 aa22.88■■□□□ 1.25
SFXN2-203ENST00000480358 PRXQ9BXM0 1461 aa22.87■■□□□ 1.25
SFXN2-203ENST00000480358 KIF21BO75037 1637 aa22.86■■□□□ 1.25
SFXN2-203ENST00000480358 CARMIL1Q5VZK9 1371 aa22.85■■□□□ 1.25
SFXN2-203ENST00000480358 SNAPC4Q5SXM2 1469 aa22.82■■□□□ 1.24
SFXN2-203ENST00000480358 MAGI1Q96QZ7 1491 aaPredicted RBP22.81■■□□□ 1.24
SFXN2-203ENST00000480358 ADAMTS12P58397 1594 aa22.8■■□□□ 1.24
SFXN2-203ENST00000480358 RAPGEF2Q9Y4G8 1499 aa22.79■■□□□ 1.24
SFXN2-203ENST00000480358 FHAD1B1AJZ9 1412 aa22.79■■□□□ 1.24
SFXN2-203ENST00000480358 GOLGA3Q08378 1498 aa22.78■■□□□ 1.24
SFXN2-203ENST00000480358 LOC105371045A0A1W2PR82 267 aa22.77■■□□□ 1.24
SFXN2-203ENST00000480358 EHMT2Q96KQ7 1210 aa22.76■■□□□ 1.23
SFXN2-203ENST00000480358 SYNJ2O15056 1496 aa22.71■■□□□ 1.23
SFXN2-203ENST00000480358 UBTFP17480 764 aaKnown RBP22.67■■□□□ 1.22
SFXN2-203ENST00000480358 CHMP7Q8WUX9 453 aaPredicted RBP22.66■■□□□ 1.22
SFXN2-203ENST00000480358 GRIN2AQ12879 1464 aa22.65■■□□□ 1.22
SFXN2-203ENST00000480358 FBLN2P98095 1184 aa22.62■■□□□ 1.21
SFXN2-203ENST00000480358 TNIKQ9UKE5 1360 aa22.61■■□□□ 1.21
SFXN2-203ENST00000480358 CHD1O14646 1710 aa22.59■■□□□ 1.21
SFXN2-203ENST00000480358 CTTNBP2Q8WZ74 1663 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms