RNA–Protein interactions for RNA: ENST00000478954.1

STRADBP1-201, Transcript of STE20-related kinase adaptor beta pseudogene 1, humanhuman

BASIC

Gene STRADBP1, Length 1,281 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADBP1-201ENST00000478954 CYLDQ9NQC7 956 aa9.1□□□□□ -0.95
STRADBP1-201ENST00000478954 PCDHB11Q9Y5F2 797 aa9.1□□□□□ -0.95
STRADBP1-201ENST00000478954 EMILIN1Q9Y6C2 1016 aa9.1□□□□□ -0.95
STRADBP1-201ENST00000478954 CAPN5O15484 640 aaPredicted RBP9.09□□□□□ -0.95
STRADBP1-201ENST00000478954 DHX9Q08211 1270 aaKnown RBP9.09□□□□□ -0.95
STRADBP1-201ENST00000478954 ELOAQ14241 798 aaKnown RBP9.09□□□□□ -0.95
STRADBP1-201ENST00000478954 PHLDB3Q6NSJ2 640 aa9.09□□□□□ -0.95
STRADBP1-201ENST00000478954 DNMBPQ6XZF7 1577 aa9.08□□□□□ -0.96
STRADBP1-201ENST00000478954 AXIN1O15169 862 aa9.08□□□□□ -0.96
STRADBP1-201ENST00000478954 BMP1P13497 986 aa9.08□□□□□ -0.96
STRADBP1-201ENST00000478954 ADD1P35611 737 aaKnown RBP9.08□□□□□ -0.96
STRADBP1-201ENST00000478954 RNF20Q5VTR2 975 aa9.08□□□□□ -0.96
STRADBP1-201ENST00000478954 MAGI1Q96QZ7 1491 aaPredicted RBP9.08□□□□□ -0.96
STRADBP1-201ENST00000478954 UNCXA6NJT0 531 aa9.07□□□□□ -0.96
STRADBP1-201ENST00000478954 CTC1Q2NKJ3 1217 aa9.07□□□□□ -0.96
STRADBP1-201ENST00000478954 TXNDC2Q86VQ3 553 aa9.07□□□□□ -0.96
STRADBP1-201ENST00000478954 PLPP7Q8NBV4 271 aa9.07□□□□□ -0.96
STRADBP1-201ENST00000478954 PGPEP1Q9NXJ5 209 aa9.07□□□□□ -0.96
STRADBP1-201ENST00000478954 DOLKQ9UPQ8 538 aa9.07□□□□□ -0.96
STRADBP1-201ENST00000478954 TDRD9Q8NDG6 1382 aaKnown RBP9.07□□□□□ -0.96
STRADBP1-201ENST00000478954 POTECB2RU33 542 aa9.06□□□□□ -0.96
STRADBP1-201ENST00000478954 SKIP12755 728 aa9.06□□□□□ -0.96
STRADBP1-201ENST00000478954 ERVK-9P63128 1117 aa9.06□□□□□ -0.96
STRADBP1-201ENST00000478954 TRIM46Q7Z4K8 759 aa9.06□□□□□ -0.96
STRADBP1-201ENST00000478954 MEIOBQ8N635 442 aa9.06□□□□□ -0.96
STRADBP1-201ENST00000478954 SLAIN2Q9P270 581 aa9.06□□□□□ -0.96
STRADBP1-201ENST00000478954 NOVA2Q9UNW9 492 aaKnown RBP9.06□□□□□ -0.96
STRADBP1-201ENST00000478954 MAPKBP1O60336 1514 aa9.05□□□□□ -0.96
STRADBP1-201ENST00000478954 ABCC8Q09428 1581 aa9.05□□□□□ -0.96
STRADBP1-201ENST00000478954 CEP170Q5SW79 1584 aa9.05□□□□□ -0.96
STRADBP1-201ENST00000478954 POLA1P09884 1462 aaPredicted RBP9.05□□□□□ -0.96
STRADBP1-201ENST00000478954 USP17L3A6NCW0 530 aa9.05□□□□□ -0.96
STRADBP1-201ENST00000478954 USP17L4A6NCW7 530 aa9.05□□□□□ -0.96
STRADBP1-201ENST00000478954 OXLD1Q5BKU9 147 aa9.05□□□□□ -0.96
STRADBP1-201ENST00000478954 USP17L2Q6R6M4 530 aa9.05□□□□□ -0.96
STRADBP1-201ENST00000478954 Q6ZVU0 165 aa9.05□□□□□ -0.96
STRADBP1-201ENST00000478954 USP17L1Q7RTZ2 530 aa9.05□□□□□ -0.96
STRADBP1-201ENST00000478954 DEPDC4Q8N2C3 294 aa9.05□□□□□ -0.96
STRADBP1-201ENST00000478954 KDF1Q8NAX2 398 aaPredicted RBP9.05□□□□□ -0.96
STRADBP1-201ENST00000478954 RAD54L2Q9Y4B4 1467 aa9.04□□□□□ -0.96
STRADBP1-201ENST00000478954 USP17L5A8MUK1 530 aa9.04□□□□□ -0.96
STRADBP1-201ENST00000478954 CC2D2BQ6DHV5 1058 aa9.04□□□□□ -0.96
STRADBP1-201ENST00000478954 AGBL1Q96MI9 1066 aa9.04□□□□□ -0.96
STRADBP1-201ENST00000478954 OSBPL3Q9H4L5 887 aa9.04□□□□□ -0.96
STRADBP1-201ENST00000478954 ZNF787Q6DD87 383 aa9.03□□□□□ -0.96
STRADBP1-201ENST00000478954 B4GALNT3Q6L9W6 998 aa9.03□□□□□ -0.96
STRADBP1-201ENST00000478954 NFATC2IPQ8NCF5 419 aa9.03□□□□□ -0.96
STRADBP1-201ENST00000478954 ATP13A2Q9NQ11 1180 aa9.03□□□□□ -0.96
STRADBP1-201ENST00000478954 PPRC1Q5VV67 1664 aaKnown RBP9.03□□□□□ -0.96
STRADBP1-201ENST00000478954 ADH1AP07327 375 aa9.02□□□□□ -0.97
STRADBP1-201ENST00000478954 NCOA4Q13772 614 aa9.02□□□□□ -0.97
STRADBP1-201ENST00000478954 CRTC2Q53ET0 693 aaPredicted RBP9.02□□□□□ -0.97
STRADBP1-201ENST00000478954 MRPL14Q6P1L8 145 aaKnown RBP9.02□□□□□ -0.97
STRADBP1-201ENST00000478954 PLEKHM2Q8IWE5 1019 aa9.02□□□□□ -0.97
STRADBP1-201ENST00000478954 STAU1O95793 577 aaKnown RBP9.01□□□□□ -0.97
STRADBP1-201ENST00000478954 SSFA2P28290 1259 aa9.01□□□□□ -0.97
STRADBP1-201ENST00000478954 MAP7D1Q3KQU3 841 aa9.01□□□□□ -0.97
STRADBP1-201ENST00000478954 CCDC125Q86Z20 511 aa9.01□□□□□ -0.97
STRADBP1-201ENST00000478954 LINC00528Q8N1L1 170 aa9.01□□□□□ -0.97
STRADBP1-201ENST00000478954 CCER1Q8TC90 406 aaPredicted RBP9.01□□□□□ -0.97
STRADBP1-201ENST00000478954 WDR97A6NE52 1622 aa9.01□□□□□ -0.97
STRADBP1-201ENST00000478954 TOP2BQ02880 1626 aa9.01□□□□□ -0.97
STRADBP1-201ENST00000478954 SHROOM2Q13796 1616 aa9.01□□□□□ -0.97
STRADBP1-201ENST00000478954 RELBQ01201 579 aa9□□□□□ -0.97
STRADBP1-201ENST00000478954 PURBQ96QR8 312 aaKnown RBP9□□□□□ -0.97
STRADBP1-201ENST00000478954 RBM47A0AV96 593 aaKnown RBP8.99□□□□□ -0.97
STRADBP1-201ENST00000478954 FAM196BA6NMK8 535 aa8.99□□□□□ -0.97
STRADBP1-201ENST00000478954 USP17L15C9J2P7 530 aa8.99□□□□□ -0.97
STRADBP1-201ENST00000478954 USP17L10C9JJH3 530 aa8.99□□□□□ -0.97
STRADBP1-201ENST00000478954 USP17L13C9JLJ4 530 aa8.99□□□□□ -0.97
STRADBP1-201ENST00000478954 USP17L12C9JPN9 530 aa8.99□□□□□ -0.97
STRADBP1-201ENST00000478954 USP17L11C9JVI0 530 aa8.99□□□□□ -0.97
STRADBP1-201ENST00000478954 USP17L21D6R901 530 aa8.99□□□□□ -0.97
STRADBP1-201ENST00000478954 USP17L18D6R9N7 530 aa8.99□□□□□ -0.97
STRADBP1-201ENST00000478954 USP17L22D6RA61 530 aa8.99□□□□□ -0.97
STRADBP1-201ENST00000478954 USP17L17D6RBQ6 530 aa8.99□□□□□ -0.97
STRADBP1-201ENST00000478954 USP17L19D6RCP7 530 aa8.99□□□□□ -0.97
STRADBP1-201ENST00000478954 USP17L20D6RJB6 530 aa8.99□□□□□ -0.97
STRADBP1-201ENST00000478954 USP17L24Q0WX57 530 aa8.99□□□□□ -0.97
STRADBP1-201ENST00000478954 NOM1Q5C9Z4 860 aaKnown RBP8.99□□□□□ -0.97
STRADBP1-201ENST00000478954 C6orf118Q5T5N4 469 aa8.99□□□□□ -0.97
STRADBP1-201ENST00000478954 DNAJC14Q6Y2X3 702 aaPredicted RBP8.99□□□□□ -0.97
STRADBP1-201ENST00000478954 GMPR2Q9P2T1 348 aaKnown RBP8.99□□□□□ -0.97
STRADBP1-201ENST00000478954 MKRN1Q9UHC7 482 aaKnown RBP8.99□□□□□ -0.97
STRADBP1-201ENST00000478954 COL17A1Q9UMD9 1497 aaPredicted RBP8.99□□□□□ -0.97
STRADBP1-201ENST00000478954 PTK7Q13308 1070 aa8.98□□□□□ -0.97
STRADBP1-201ENST00000478954 EML3Q32P44 896 aa8.98□□□□□ -0.97
STRADBP1-201ENST00000478954 ZFP42Q96MM3 310 aa8.98□□□□□ -0.97
STRADBP1-201ENST00000478954 ZNF395Q9H8N7 513 aaPredicted RBP8.98□□□□□ -0.97
STRADBP1-201ENST00000478954 PBRM1Q86U86 1689 aa8.97□□□□□ -0.97
STRADBP1-201ENST00000478954 GRIN2BQ13224 1484 aa8.97□□□□□ -0.97
STRADBP1-201ENST00000478954 RAB6BQ9NRW1 208 aa8.97□□□□□ -0.97
STRADBP1-201ENST00000478954 ATP5J2-PTCD1G3V325 749 aa8.96□□□□□ -0.98
STRADBP1-201ENST00000478954 MYCP01106 439 aaPredicted RBP8.96□□□□□ -0.98
STRADBP1-201ENST00000478954 ARID4AP29374 1257 aaPredicted RBP8.96□□□□□ -0.98
STRADBP1-201ENST00000478954 PTGIRP43119 386 aa8.96□□□□□ -0.98
STRADBP1-201ENST00000478954 USP4Q13107 963 aa8.96□□□□□ -0.98
STRADBP1-201ENST00000478954 CYP2U1Q7Z449 544 aa8.96□□□□□ -0.98
STRADBP1-201ENST00000478954 TSEN34Q9BSV6 310 aaKnown RBP8.96□□□□□ -0.98
STRADBP1-201ENST00000478954 ARHGEF10LQ9HCE6 1279 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms