RNA–Protein interactions for RNA: ENST00000478848.1

FMR1-211, Transcript of fragile X mental retardation 1, humanhuman

TSL 2

Gene FMR1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-211ENST00000478848 SOX10P56693 466 aa12.52□□□□□ -0.41
FMR1-211ENST00000478848 BEGAINQ9BUH8 593 aa12.52□□□□□ -0.41
FMR1-211ENST00000478848 PASKQ96RG2 1323 aa12.52□□□□□ -0.41
FMR1-211ENST00000478848 NFAT5O94916 1531 aa12.52□□□□□ -0.41
FMR1-211ENST00000478848 LMNB1P20700 586 aa12.51□□□□□ -0.41
FMR1-211ENST00000478848 CACNB1Q02641 598 aaPredicted RBP12.51□□□□□ -0.41
FMR1-211ENST00000478848 DEFB115Q30KQ5 88 aa12.51□□□□□ -0.41
FMR1-211ENST00000478848 ZNF219Q9P2Y4 722 aaPredicted RBP12.51□□□□□ -0.41
FMR1-211ENST00000478848 WDR33Q9C0J8 1336 aaKnown RBP12.51□□□□□ -0.41
FMR1-211ENST00000478848 GNPATO15228 680 aa12.5□□□□□ -0.41
FMR1-211ENST00000478848 DPY19L2Q6NUT2 758 aa12.5□□□□□ -0.41
FMR1-211ENST00000478848 ZCRB1Q8TBF4 217 aaKnown RBP12.5□□□□□ -0.41
FMR1-211ENST00000478848 KDM6AO15550 1401 aaPredicted RBP12.49□□□□□ -0.41
FMR1-211ENST00000478848 TTC21BQ7Z4L5 1316 aa12.49□□□□□ -0.41
FMR1-211ENST00000478848 CHRNA5P30532 468 aa12.49□□□□□ -0.41
FMR1-211ENST00000478848 TMF1P82094 1093 aa12.49□□□□□ -0.41
FMR1-211ENST00000478848 DGKZQ13574 1117 aa12.49□□□□□ -0.41
FMR1-211ENST00000478848 MPRIPQ6WCQ1 1025 aa12.49□□□□□ -0.41
FMR1-211ENST00000478848 NLGN1Q8N2Q7 840 aa12.49□□□□□ -0.41
FMR1-211ENST00000478848 DLL1O00548 723 aa12.48□□□□□ -0.41
FMR1-211ENST00000478848 LINC00116Q8NCU8 138 aa12.48□□□□□ -0.41
FMR1-211ENST00000478848 LTV1Q96GA3 475 aaPredicted RBP12.48□□□□□ -0.41
FMR1-211ENST00000478848 MPHOSPH9Q99550 1183 aa12.48□□□□□ -0.41
FMR1-211ENST00000478848 PARP3Q9Y6F1 533 aa12.48□□□□□ -0.41
FMR1-211ENST00000478848 RASSF10A6NK89 507 aa12.47□□□□□ -0.41
FMR1-211ENST00000478848 CASP8AP2Q9UKL3 1982 aa12.47□□□□□ -0.41
FMR1-211ENST00000478848 GRM1Q13255 1194 aa12.46□□□□□ -0.41
FMR1-211ENST00000478848 GCC1Q96CN9 775 aa12.46□□□□□ -0.41
FMR1-211ENST00000478848 ABT1Q9ULW3 272 aaKnown RBP12.46□□□□□ -0.41
FMR1-211ENST00000478848 HABP4Q5JVS0 413 aaKnown RBP12.45□□□□□ -0.42
FMR1-211ENST00000478848 PAXIP1Q6ZW49 1069 aaPredicted RBP12.45□□□□□ -0.42
FMR1-211ENST00000478848 DCAF11Q8TEB1 546 aa12.45□□□□□ -0.42
FMR1-211ENST00000478848 SMARCC1Q92922 1105 aaPredicted RBP12.45□□□□□ -0.42
FMR1-211ENST00000478848 ITGBL1O95965 494 aaPredicted RBP12.44□□□□□ -0.42
FMR1-211ENST00000478848 C4AP0C0L4 1744 aa12.43□□□□□ -0.42
FMR1-211ENST00000478848 TRAPPC3LQ5T215 181 aa12.43□□□□□ -0.42
FMR1-211ENST00000478848 LDHDQ86WU2 507 aa12.43□□□□□ -0.42
FMR1-211ENST00000478848 TIAM2Q8IVF5 1701 aa12.42□□□□□ -0.42
FMR1-211ENST00000478848 TTC21AQ8NDW8 1320 aa12.42□□□□□ -0.42
FMR1-211ENST00000478848 LOC102724428A0A0B4J2F2 783 aa12.42□□□□□ -0.42
FMR1-211ENST00000478848 GYS1P13807 737 aa12.42□□□□□ -0.42
FMR1-211ENST00000478848 SIK1P57059 783 aa12.42□□□□□ -0.42
FMR1-211ENST00000478848 GPR101Q96P66 508 aaPredicted RBP12.42□□□□□ -0.42
FMR1-211ENST00000478848 A0A0C4DFX4 3053 aa12.41□□□□□ -0.42
FMR1-211ENST00000478848 DDNO94850 711 aaPredicted RBP12.41□□□□□ -0.42
FMR1-211ENST00000478848 ITPK1Q13572 414 aa12.41□□□□□ -0.42
FMR1-211ENST00000478848 PPARGC1BQ86YN6 1023 aaKnown RBP12.41□□□□□ -0.42
FMR1-211ENST00000478848 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.41□□□□□ -0.42
FMR1-211ENST00000478848 CAPNS2Q96L46 248 aa12.41□□□□□ -0.42
FMR1-211ENST00000478848 MEGF6O75095 1541 aa12.41□□□□□ -0.42
FMR1-211ENST00000478848 ERFEQ4G0M1 354 aa12.4□□□□□ -0.42
FMR1-211ENST00000478848 EAPPQ56P03 285 aaPredicted RBP12.4□□□□□ -0.42
FMR1-211ENST00000478848 ZNF692Q9BU19 519 aaPredicted RBP12.4□□□□□ -0.42
FMR1-211ENST00000478848 CCDC88AQ3V6T2 1871 aa12.4□□□□□ -0.42
FMR1-211ENST00000478848 LTN1O94822 1766 aa12.39□□□□□ -0.43
FMR1-211ENST00000478848 NFKBIEO00221 500 aa12.39□□□□□ -0.43
FMR1-211ENST00000478848 ATP6V1AP38606 617 aa12.39□□□□□ -0.43
FMR1-211ENST00000478848 NBPF1Q3BBV0 1214 aa12.39□□□□□ -0.43
FMR1-211ENST00000478848 ARHGEF1Q92888 912 aaKnown RBP12.39□□□□□ -0.43
FMR1-211ENST00000478848 CLEC11AQ9Y240 323 aa12.39□□□□□ -0.43
FMR1-211ENST00000478848 RTCBQ9Y3I0 505 aaKnown RBP12.39□□□□□ -0.43
FMR1-211ENST00000478848 CYP4F22Q6NT55 531 aa12.38□□□□□ -0.43
FMR1-211ENST00000478848 NBPF15Q8N660 670 aa12.38□□□□□ -0.43
FMR1-211ENST00000478848 PIGBQ92521 554 aa12.38□□□□□ -0.43
FMR1-211ENST00000478848 RFC4P35249 363 aa12.37□□□□□ -0.43
FMR1-211ENST00000478848 ECE1P42892 770 aa12.37□□□□□ -0.43
FMR1-211ENST00000478848 TAF1DQ9H5J8 278 aaPredicted RBP12.37□□□□□ -0.43
FMR1-211ENST00000478848 LTBP1Q14766 1721 aa12.37□□□□□ -0.43
FMR1-211ENST00000478848 IQCA1LA6NCM1 817 aa12.36□□□□□ -0.43
FMR1-211ENST00000478848 AOC2O75106 756 aa12.36□□□□□ -0.43
FMR1-211ENST00000478848 FXR1P51114 621 aaKnown RBP eCLIP12.36□□□□□ -0.43
FMR1-211ENST00000478848 DDR1Q08345 913 aa12.36□□□□□ -0.43
FMR1-211ENST00000478848 MAP1SQ66K74 1059 aaPredicted RBP12.36□□□□□ -0.43
FMR1-211ENST00000478848 NME9Q86XW9 330 aa12.36□□□□□ -0.43
FMR1-211ENST00000478848 IP6K1Q92551 441 aa12.36□□□□□ -0.43
FMR1-211ENST00000478848 CENPJQ9HC77 1338 aaPredicted RBP12.36□□□□□ -0.43
FMR1-211ENST00000478848 KTN1Q86UP2 1357 aaKnown RBP12.35□□□□□ -0.43
FMR1-211ENST00000478848 CA12O43570 354 aa12.35□□□□□ -0.43
FMR1-211ENST00000478848 CNTROBQ8N137 903 aa12.35□□□□□ -0.43
FMR1-211ENST00000478848 USHBP1Q8N6Y0 703 aa12.34□□□□□ -0.43
FMR1-211ENST00000478848 SLC17A8Q8NDX2 589 aa12.34□□□□□ -0.43
FMR1-211ENST00000478848 THSD7BQ9C0I4 1608 aa12.33□□□□□ -0.43
FMR1-211ENST00000478848 USP31Q70CQ4 1352 aa12.33□□□□□ -0.44
FMR1-211ENST00000478848 TRIOBPQ9H2D6 2365 aa12.33□□□□□ -0.44
FMR1-211ENST00000478848 MAP2P11137 1827 aaKnown RBP12.33□□□□□ -0.44
FMR1-211ENST00000478848 TTLL6Q8N841 843 aa12.33□□□□□ -0.44
FMR1-211ENST00000478848 RAPGEF4Q8WZA2 1011 aa12.33□□□□□ -0.44
FMR1-211ENST00000478848 ASAP1Q9ULH1 1129 aa12.33□□□□□ -0.44
FMR1-211ENST00000478848 PCDH11XQ9BZA7 1347 aa12.33□□□□□ -0.44
FMR1-211ENST00000478848 PCDH11YQ9BZA8 1340 aa12.33□□□□□ -0.44
FMR1-211ENST00000478848 FAM208AQ9UK61 1670 aaKnown RBP12.32□□□□□ -0.44
FMR1-211ENST00000478848 MAP2K2P36507 400 aa12.32□□□□□ -0.44
FMR1-211ENST00000478848 FKBP8Q14318 412 aa12.32□□□□□ -0.44
FMR1-211ENST00000478848 TATP17735 454 aaPredicted RBP12.31□□□□□ -0.44
FMR1-211ENST00000478848 DDX21Q9NR30 783 aaKnown RBP eCLIP12.31□□□□□ -0.44
FMR1-211ENST00000478848 SRP68Q9UHB9 627 aaKnown RBP12.31□□□□□ -0.44
FMR1-211ENST00000478848 ITGB4P16144 1822 aa12.31□□□□□ -0.44
FMR1-211ENST00000478848 CGNL1Q0VF96 1302 aa12.31□□□□□ -0.44
FMR1-211ENST00000478848 CYP27B1O15528 508 aa12.3□□□□□ -0.44
FMR1-211ENST00000478848 FMR1Q06787 632 aaKnown RBP eCLIP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms