RNA–Protein interactions for RNA: ENST00000477696.5

CD40-205, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 771 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-205ENST00000477696 SYT17Q9BSW7 474 aa11.54□□□□□ -0.56
CD40-205ENST00000477696 TFCP2L1Q9NZI6 479 aa11.54□□□□□ -0.56
CD40-205ENST00000477696 CABP4P57796 275 aa11.53□□□□□ -0.56
CD40-205ENST00000477696 AKAP4Q5JQC9 854 aa11.53□□□□□ -0.56
CD40-205ENST00000477696 SLC16A10Q8TF71 515 aa11.53□□□□□ -0.56
CD40-205ENST00000477696 COL5A3P25940 1745 aaPredicted RBP11.52□□□□□ -0.56
CD40-205ENST00000477696 COL3A1P02461 1466 aaPredicted RBP11.52□□□□□ -0.56
CD40-205ENST00000477696 ARXQ96QS3 562 aa11.52□□□□□ -0.57
CD40-205ENST00000477696 VIRMAQ69YN4 1812 aaKnown RBP11.51□□□□□ -0.57
CD40-205ENST00000477696 CICQ96RK0 1608 aaPredicted RBP11.51□□□□□ -0.57
CD40-205ENST00000477696 LOC102724428A0A0B4J2F2 783 aa11.51□□□□□ -0.57
CD40-205ENST00000477696 KCNQ4P56696 695 aa11.51□□□□□ -0.57
CD40-205ENST00000477696 SIK1P57059 783 aa11.51□□□□□ -0.57
CD40-205ENST00000477696 RALBP1Q15311 655 aa11.51□□□□□ -0.57
CD40-205ENST00000477696 FLAD1Q8NFF5 587 aa11.51□□□□□ -0.57
CD40-205ENST00000477696 GAS2L2Q8NHY3 880 aa11.5□□□□□ -0.57
CD40-205ENST00000477696 ATG3Q9NT62 314 aa11.5□□□□□ -0.57
CD40-205ENST00000477696 ASAP1Q9ULH1 1129 aa11.5□□□□□ -0.57
CD40-205ENST00000477696 KDM6AO15550 1401 aaPredicted RBP11.5□□□□□ -0.57
CD40-205ENST00000477696 U2AF1L5P0DN76 240 aaPredicted RBP11.49□□□□□ -0.57
CD40-205ENST00000477696 ATP6V1AP38606 617 aa11.49□□□□□ -0.57
CD40-205ENST00000477696 U2AF1Q01081 240 aaKnown RBP eCLIP11.49□□□□□ -0.57
CD40-205ENST00000477696 DDX10Q13206 875 aaKnown RBP11.49□□□□□ -0.57
CD40-205ENST00000477696 MTHFSDQ2M296 383 aaKnown RBP11.49□□□□□ -0.57
CD40-205ENST00000477696 NFATC2IPQ8NCF5 419 aa11.49□□□□□ -0.57
CD40-205ENST00000477696 AK7Q96M32 723 aa11.49□□□□□ -0.57
CD40-205ENST00000477696 UTRNP46939 3433 aa11.49□□□□□ -0.57
CD40-205ENST00000477696 KIF13BQ9NQT8 1826 aa11.49□□□□□ -0.57
CD40-205ENST00000477696 FCHSD2O94868 740 aa11.48□□□□□ -0.57
CD40-205ENST00000477696 CACNB1Q02641 598 aaPredicted RBP11.48□□□□□ -0.57
CD40-205ENST00000477696 KIAA1551Q9HCM1 1747 aa11.48□□□□□ -0.57
CD40-205ENST00000477696 SCN11AQ9UI33 1791 aa11.48□□□□□ -0.57
CD40-205ENST00000477696 C4AP0C0L4 1744 aa11.47□□□□□ -0.57
CD40-205ENST00000477696 GNAT3A8MTJ3 354 aa11.47□□□□□ -0.57
CD40-205ENST00000477696 RNMTO43148 476 aaKnown RBP11.47□□□□□ -0.57
CD40-205ENST00000477696 NEFMP07197 916 aa11.47□□□□□ -0.57
CD40-205ENST00000477696 POLD1P28340 1107 aa11.47□□□□□ -0.57
CD40-205ENST00000477696 RBM42Q9BTD8 480 aaKnown RBP11.47□□□□□ -0.57
CD40-205ENST00000477696 PNNQ9H307 717 aaKnown RBP11.47□□□□□ -0.57
CD40-205ENST00000477696 SLC52A2Q9HAB3 445 aa11.47□□□□□ -0.57
CD40-205ENST00000477696 PRKAR2BP31323 418 aa11.46□□□□□ -0.57
CD40-205ENST00000477696 RSPH6AQ9H0K4 717 aa11.46□□□□□ -0.57
CD40-205ENST00000477696 SENP3-EIF4A1A0A087X0R7 540 aa11.45□□□□□ -0.58
CD40-205ENST00000477696 SSFA2P28290 1259 aa11.45□□□□□ -0.58
CD40-205ENST00000477696 RC3H1Q5TC82 1133 aaKnown RBP11.45□□□□□ -0.58
CD40-205ENST00000477696 COL23A1Q86Y22 540 aaPredicted RBP11.45□□□□□ -0.58
CD40-205ENST00000477696 LINC00116Q8NCU8 138 aa11.45□□□□□ -0.58
CD40-205ENST00000477696 LGR6Q9HBX8 967 aa11.45□□□□□ -0.58
CD40-205ENST00000477696 TJP1Q07157 1748 aa11.44□□□□□ -0.58
CD40-205ENST00000477696 TEFQ10587 303 aa11.44□□□□□ -0.58
CD40-205ENST00000477696 ITPK1Q13572 414 aa11.44□□□□□ -0.58
CD40-205ENST00000477696 ZNF784Q8NCA9 323 aaPredicted RBP11.44□□□□□ -0.58
CD40-205ENST00000477696 PHACTR3Q96KR7 559 aa11.44□□□□□ -0.58
CD40-205ENST00000477696 BRCA1P38398 1863 aaKnown RBP11.44□□□□□ -0.58
CD40-205ENST00000477696 ADAMTS7Q9UKP4 1686 aa11.43□□□□□ -0.58
CD40-205ENST00000477696 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.43□□□□□ -0.58
CD40-205ENST00000477696 GNPATO15228 680 aa11.43□□□□□ -0.58
CD40-205ENST00000477696 PTCD1O75127 700 aaKnown RBP11.43□□□□□ -0.58
CD40-205ENST00000477696 RTF1Q92541 710 aaKnown RBP11.43□□□□□ -0.58
CD40-205ENST00000477696 RTCBQ9Y3I0 505 aaKnown RBP11.43□□□□□ -0.58
CD40-205ENST00000477696 MRC1P22897 1456 aa11.43□□□□□ -0.58
CD40-205ENST00000477696 MYBBP1AQ9BQG0 1328 aaKnown RBP11.42□□□□□ -0.58
CD40-205ENST00000477696 CNTNAP4Q9C0A0 1308 aa11.42□□□□□ -0.58
CD40-205ENST00000477696 MYH14Q7Z406 1995 aaKnown RBP11.42□□□□□ -0.58
CD40-205ENST00000477696 HTATSF1O43719 755 aaKnown RBP11.42□□□□□ -0.58
CD40-205ENST00000477696 TRAPPC3LQ5T215 181 aa11.42□□□□□ -0.58
CD40-205ENST00000477696 TTC5Q8N0Z6 440 aa11.42□□□□□ -0.58
CD40-205ENST00000477696 NLGN2Q8NFZ4 835 aa11.42□□□□□ -0.58
CD40-205ENST00000477696 PHF14O94880 888 aa11.41□□□□□ -0.58
CD40-205ENST00000477696 IFFO2Q5TF58 517 aa11.41□□□□□ -0.58
CD40-205ENST00000477696 VSIG10Q8N0Z9 540 aa11.41□□□□□ -0.58
CD40-205ENST00000477696 IL17REQ8NFR9 667 aa11.41□□□□□ -0.58
CD40-205ENST00000477696 SLC4A9Q96Q91 983 aa11.41□□□□□ -0.58
CD40-205ENST00000477696 AMIGO3Q86WK7 504 aa11.4□□□□□ -0.58
CD40-205ENST00000477696 TEX13AQ9BXU3 409 aaPredicted RBP11.4□□□□□ -0.58
CD40-205ENST00000477696 CEMIPQ8WUJ3 1361 aa11.4□□□□□ -0.59
CD40-205ENST00000477696 MAPK8IP3Q9UPT6 1336 aa11.39□□□□□ -0.59
CD40-205ENST00000477696 RPS6KA4O75676 772 aa11.39□□□□□ -0.59
CD40-205ENST00000477696 RFC4P35249 363 aa11.39□□□□□ -0.59
CD40-205ENST00000477696 SLC39A6Q13433 755 aa11.39□□□□□ -0.59
CD40-205ENST00000477696 GOLGB1Q14789 3259 aaKnown RBP11.39□□□□□ -0.59
CD40-205ENST00000477696 N4BP2Q86UW6 1770 aaPredicted RBP11.39□□□□□ -0.59
CD40-205ENST00000477696 UBR2Q8IWV8 1755 aa11.39□□□□□ -0.59
CD40-205ENST00000477696 ZNF316A6NFI3 1004 aaPredicted RBP11.38□□□□□ -0.59
CD40-205ENST00000477696 BTBD11A6QL63 1104 aa11.38□□□□□ -0.59
CD40-205ENST00000477696 STARD3NLO95772 234 aa11.38□□□□□ -0.59
CD40-205ENST00000477696 CRKLP46109 303 aaKnown RBP11.38□□□□□ -0.59
CD40-205ENST00000477696 GPR162Q16538 588 aa11.38□□□□□ -0.59
CD40-205ENST00000477696 MSL1Q68DK7 614 aa11.38□□□□□ -0.59
CD40-205ENST00000477696 ZNF790Q6PG37 636 aa11.38□□□□□ -0.59
CD40-205ENST00000477696 KLHL34Q8N239 644 aa11.38□□□□□ -0.59
CD40-205ENST00000477696 NLGN1Q8N2Q7 840 aa11.38□□□□□ -0.59
CD40-205ENST00000477696 PRKRIP1Q9H875 184 aaPredicted RBP11.38□□□□□ -0.59
CD40-205ENST00000477696 CD2APQ9Y5K6 639 aa11.38□□□□□ -0.59
CD40-205ENST00000477696 ARFGEF1Q9Y6D6 1849 aa11.37□□□□□ -0.59
CD40-205ENST00000477696 SIPA1L3O60292 1781 aaPredicted RBP11.37□□□□□ -0.59
CD40-205ENST00000477696 YBX3P16989 372 aaKnown RBP eCLIP11.37□□□□□ -0.59
CD40-205ENST00000477696 C1QTNF8P60827 252 aa11.37□□□□□ -0.59
CD40-205ENST00000477696 NFE2L2Q16236 605 aa11.37□□□□□ -0.59
CD40-205ENST00000477696 DNAJC10Q8IXB1 793 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms