RNA–Protein interactions for RNA: ENST00000477578.5

ZC3HC1-207, Transcript of zinc finger C3HC-type containing 1, humanhuman

TSL 2

Gene ZC3HC1, Length 850 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1-207ENST00000477578 PRKAR2BP31323 418 aa12.89□□□□□ -0.35
ZC3HC1-207ENST00000477578 CABP4P57796 275 aa12.89□□□□□ -0.35
ZC3HC1-207ENST00000477578 U2AF1Q01081 240 aaKnown RBP eCLIP12.89□□□□□ -0.35
ZC3HC1-207ENST00000477578 NFATC2IPQ8NCF5 419 aa12.89□□□□□ -0.35
ZC3HC1-207ENST00000477578 PHACTR3Q96KR7 559 aa12.89□□□□□ -0.35
ZC3HC1-207ENST00000477578 LOC102724428A0A0B4J2F2 783 aa12.87□□□□□ -0.35
ZC3HC1-207ENST00000477578 RNMTO43148 476 aaKnown RBP12.87□□□□□ -0.35
ZC3HC1-207ENST00000477578 SIK1P57059 783 aa12.87□□□□□ -0.35
ZC3HC1-207ENST00000477578 SPON1Q9HCB6 807 aa12.87□□□□□ -0.35
ZC3HC1-207ENST00000477578 GTF3C3Q9Y5Q9 886 aa12.87□□□□□ -0.35
ZC3HC1-207ENST00000477578 C4BP0C0L5 1744 aa12.87□□□□□ -0.35
ZC3HC1-207ENST00000477578 PNPLA7Q6ZV29 1317 aa12.87□□□□□ -0.35
ZC3HC1-207ENST00000477578 FCHSD2O94868 740 aa12.86□□□□□ -0.35
ZC3HC1-207ENST00000477578 ZBTB7AO95365 584 aa12.86□□□□□ -0.35
ZC3HC1-207ENST00000477578 ITPK1Q13572 414 aa12.86□□□□□ -0.35
ZC3HC1-207ENST00000477578 GAS2L2Q8NHY3 880 aa12.86□□□□□ -0.35
ZC3HC1-207ENST00000477578 SLC4A9Q96Q91 983 aa12.86□□□□□ -0.35
ZC3HC1-207ENST00000477578 TFCP2L1Q9NZI6 479 aa12.86□□□□□ -0.35
ZC3HC1-207ENST00000477578 ZNF831Q5JPB2 1677 aa12.86□□□□□ -0.35
ZC3HC1-207ENST00000477578 MYBBP1AQ9BQG0 1328 aaKnown RBP12.86□□□□□ -0.35
ZC3HC1-207ENST00000477578 MRC1P22897 1456 aa12.85□□□□□ -0.35
ZC3HC1-207ENST00000477578 UBR3Q6ZT12 1888 aa12.85□□□□□ -0.35
ZC3HC1-207ENST00000477578 ATP6V1AP38606 617 aa12.85□□□□□ -0.35
ZC3HC1-207ENST00000477578 LINC00116Q8NCU8 138 aa12.85□□□□□ -0.35
ZC3HC1-207ENST00000477578 RBM42Q9BTD8 480 aaKnown RBP12.85□□□□□ -0.35
ZC3HC1-207ENST00000477578 PRKRIP1Q9H875 184 aaPredicted RBP12.85□□□□□ -0.35
ZC3HC1-207ENST00000477578 SLC52A2Q9HAB3 445 aa12.85□□□□□ -0.35
ZC3HC1-207ENST00000477578 ATF5Q9Y2D1 282 aaPredicted RBP12.85□□□□□ -0.35
ZC3HC1-207ENST00000477578 DLG5Q8TDM6 1919 aa12.84□□□□□ -0.35
ZC3HC1-207ENST00000477578 MAP3K5Q99683 1374 aa12.84□□□□□ -0.35
ZC3HC1-207ENST00000477578 GNAT3A8MTJ3 354 aa12.84□□□□□ -0.35
ZC3HC1-207ENST00000477578 IL17REQ8NFR9 667 aa12.84□□□□□ -0.35
ZC3HC1-207ENST00000477578 SIPA1L3O60292 1781 aaPredicted RBP12.84□□□□□ -0.35
ZC3HC1-207ENST00000477578 COL5A3P25940 1745 aaPredicted RBP12.83□□□□□ -0.36
ZC3HC1-207ENST00000477578 CCER2I3L3R5 266 aa12.83□□□□□ -0.36
ZC3HC1-207ENST00000477578 HMGB2P26583 209 aaKnown RBP12.83□□□□□ -0.36
ZC3HC1-207ENST00000477578 PTGER2P43116 358 aa12.83□□□□□ -0.36
ZC3HC1-207ENST00000477578 COL23A1Q86Y22 540 aaPredicted RBP12.83□□□□□ -0.36
ZC3HC1-207ENST00000477578 MTFR1LQ9H019 292 aa12.83□□□□□ -0.36
ZC3HC1-207ENST00000477578 SRCAPQ6ZRS2 3230 aa12.83□□□□□ -0.36
ZC3HC1-207ENST00000477578 COL24A1Q17RW2 1714 aa12.82□□□□□ -0.36
ZC3HC1-207ENST00000477578 MYH14Q7Z406 1995 aaKnown RBP12.82□□□□□ -0.36
ZC3HC1-207ENST00000477578 PTCD1O75127 700 aaKnown RBP12.82□□□□□ -0.36
ZC3HC1-207ENST00000477578 SLC39A6Q13433 755 aa12.82□□□□□ -0.36
ZC3HC1-207ENST00000477578 SMIM5Q71RC9 77 aa12.82□□□□□ -0.36
ZC3HC1-207ENST00000477578 AMIGO3Q86WK7 504 aa12.82□□□□□ -0.36
ZC3HC1-207ENST00000477578 SLC16A10Q8TF71 515 aa12.82□□□□□ -0.36
ZC3HC1-207ENST00000477578 SGIP1Q9BQI5 828 aa12.82□□□□□ -0.36
ZC3HC1-207ENST00000477578 TJP1Q07157 1748 aa12.82□□□□□ -0.36
ZC3HC1-207ENST00000477578 AK7Q96M32 723 aa12.81□□□□□ -0.36
ZC3HC1-207ENST00000477578 PLEKHF1Q96S99 279 aa12.81□□□□□ -0.36
ZC3HC1-207ENST00000477578 CEMIPQ8WUJ3 1361 aa12.81□□□□□ -0.36
ZC3HC1-207ENST00000477578 CICQ96RK0 1608 aaPredicted RBP12.8□□□□□ -0.36
ZC3HC1-207ENST00000477578 UBR2Q8IWV8 1755 aa12.8□□□□□ -0.36
ZC3HC1-207ENST00000477578 KCPQ6ZWJ8 1503 aa12.79□□□□□ -0.36
ZC3HC1-207ENST00000477578 TEFQ10587 303 aa12.79□□□□□ -0.36
ZC3HC1-207ENST00000477578 FLAD1Q8NFF5 587 aa12.79□□□□□ -0.36
ZC3HC1-207ENST00000477578 PPP1R1BQ9UD71 204 aaPredicted RBP12.79□□□□□ -0.36
ZC3HC1-207ENST00000477578 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.78□□□□□ -0.36
ZC3HC1-207ENST00000477578 GNPATO15228 680 aa12.78□□□□□ -0.36
ZC3HC1-207ENST00000477578 PHF14O94880 888 aa12.78□□□□□ -0.36
ZC3HC1-207ENST00000477578 DCTN1Q14203 1278 aa12.78□□□□□ -0.36
ZC3HC1-207ENST00000477578 RC3H1Q5TC82 1133 aaKnown RBP12.78□□□□□ -0.36
ZC3HC1-207ENST00000477578 MCM10Q7L590 875 aa12.78□□□□□ -0.36
ZC3HC1-207ENST00000477578 DNAJC10Q8IXB1 793 aa12.78□□□□□ -0.36
ZC3HC1-207ENST00000477578 HTATSF1O43719 755 aaKnown RBP12.77□□□□□ -0.37
ZC3HC1-207ENST00000477578 NEFMP07197 916 aa12.77□□□□□ -0.37
ZC3HC1-207ENST00000477578 SSFA2P28290 1259 aa12.77□□□□□ -0.37
ZC3HC1-207ENST00000477578 RTF1Q92541 710 aaKnown RBP12.77□□□□□ -0.37
ZC3HC1-207ENST00000477578 PNNQ9H307 717 aaKnown RBP12.77□□□□□ -0.37
ZC3HC1-207ENST00000477578 CNTNAP4Q9C0A0 1308 aa12.77□□□□□ -0.37
ZC3HC1-207ENST00000477578 KCNQ3O43525 872 aa12.76□□□□□ -0.37
ZC3HC1-207ENST00000477578 RPS6KA4O75676 772 aa12.76□□□□□ -0.37
ZC3HC1-207ENST00000477578 NFE2L2Q16236 605 aa12.76□□□□□ -0.37
ZC3HC1-207ENST00000477578 ZNF790Q6PG37 636 aa12.76□□□□□ -0.37
ZC3HC1-207ENST00000477578 CRKLP46109 303 aaKnown RBP12.75□□□□□ -0.37
ZC3HC1-207ENST00000477578 MAPK8IP2Q13387 824 aaPredicted RBP12.75□□□□□ -0.37
ZC3HC1-207ENST00000477578 MSL1Q68DK7 614 aa12.75□□□□□ -0.37
ZC3HC1-207ENST00000477578 TTC5Q8N0Z6 440 aa12.75□□□□□ -0.37
ZC3HC1-207ENST00000477578 VSIG10Q8N0Z9 540 aa12.75□□□□□ -0.37
ZC3HC1-207ENST00000477578 ZNF496Q96IT1 587 aaPredicted RBP12.75□□□□□ -0.37
ZC3HC1-207ENST00000477578 ARXQ96QS3 562 aa12.75□□□□□ -0.37
ZC3HC1-207ENST00000477578 ADAMTS8Q9UP79 889 aa12.75□□□□□ -0.37
ZC3HC1-207ENST00000477578 MAPK8IP3Q9UPT6 1336 aa12.75□□□□□ -0.37
ZC3HC1-207ENST00000477578 RTCBQ9Y3I0 505 aaKnown RBP12.75□□□□□ -0.37
ZC3HC1-207ENST00000477578 C4AP0C0L4 1744 aa12.74□□□□□ -0.37
ZC3HC1-207ENST00000477578 BTBD11A6QL63 1104 aa12.74□□□□□ -0.37
ZC3HC1-207ENST00000477578 CYP19A1P11511 503 aaPredicted RBP12.74□□□□□ -0.37
ZC3HC1-207ENST00000477578 POLD1P28340 1107 aa12.74□□□□□ -0.37
ZC3HC1-207ENST00000477578 WDR43Q15061 677 aaKnown RBP eCLIP12.74□□□□□ -0.37
ZC3HC1-207ENST00000477578 CCDC184Q52MB2 194 aa12.74□□□□□ -0.37
ZC3HC1-207ENST00000477578 TRAPPC3LQ5T215 181 aa12.74□□□□□ -0.37
ZC3HC1-207ENST00000477578 INTS5Q6P9B9 1019 aaKnown RBP12.74□□□□□ -0.37
ZC3HC1-207ENST00000477578 CCDC146Q8IYE0 955 aa12.74□□□□□ -0.37
ZC3HC1-207ENST00000477578 FHDC1Q9C0D6 1143 aaPredicted RBP12.74□□□□□ -0.37
ZC3HC1-207ENST00000477578 HEG1Q9ULI3 1381 aa12.73□□□□□ -0.37
ZC3HC1-207ENST00000477578 ARHGEF1Q92888 912 aaKnown RBP12.73□□□□□ -0.37
ZC3HC1-207ENST00000477578 TMPOP42166 694 aaKnown RBP12.72□□□□□ -0.37
ZC3HC1-207ENST00000477578 RIPK4P57078 832 aa12.72□□□□□ -0.37
ZC3HC1-207ENST00000477578 TAF7Q15545 349 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms