RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 MPRIPQ6WCQ1 1025 aa20.17■□□□□ 0.82
SEC13-215ENST00000477547 DCAF5Q96JK2 942 aa20.17■□□□□ 0.82
SEC13-215ENST00000477547 ZBTB7AO95365 584 aa20.16■□□□□ 0.82
SEC13-215ENST00000477547 RIPK4P57078 832 aa20.16■□□□□ 0.82
SEC13-215ENST00000477547 LMOD3Q0VAK6 560 aa20.16■□□□□ 0.82
SEC13-215ENST00000477547 PTF1AQ7RTS3 328 aa20.16■□□□□ 0.82
SEC13-215ENST00000477547 RTF1Q92541 710 aaKnown RBP20.16■□□□□ 0.82
SEC13-215ENST00000477547 RGPD3A6NKT7 1758 aaPredicted RBP20.16■□□□□ 0.82
SEC13-215ENST00000477547 RGPD4Q7Z3J3 1758 aa20.16■□□□□ 0.82
SEC13-215ENST00000477547 UBR2Q8IWV8 1755 aa20.15■□□□□ 0.82
SEC13-215ENST00000477547 ACSBG1Q96GR2 724 aa20.14■□□□□ 0.81
SEC13-215ENST00000477547 CEMIPQ8WUJ3 1361 aa20.14■□□□□ 0.81
SEC13-215ENST00000477547 RNMTO43148 476 aaKnown RBP20.13■□□□□ 0.81
SEC13-215ENST00000477547 MCM10Q7L590 875 aa20.13■□□□□ 0.81
SEC13-215ENST00000477547 LY75O60449 1722 aa20.13■□□□□ 0.81
SEC13-215ENST00000477547 PLSCR1O15162 318 aa20.12■□□□□ 0.81
SEC13-215ENST00000477547 HTATSF1O43719 755 aaKnown RBP20.12■□□□□ 0.81
SEC13-215ENST00000477547 PTGER2P43116 358 aa20.12■□□□□ 0.81
SEC13-215ENST00000477547 UTRNP46939 3433 aa20.12■□□□□ 0.81
SEC13-215ENST00000477547 DCTN1Q14203 1278 aa20.12■□□□□ 0.81
SEC13-215ENST00000477547 SYTL4Q96C24 671 aaPredicted RBP20.12■□□□□ 0.81
SEC13-215ENST00000477547 ATF5Q9Y2D1 282 aaPredicted RBP20.12■□□□□ 0.81
SEC13-215ENST00000477547 BCL11BQ9C0K0 894 aaPredicted RBP20.11■□□□□ 0.81
SEC13-215ENST00000477547 LGR6Q9HBX8 967 aa20.11■□□□□ 0.81
SEC13-215ENST00000477547 PROM2Q8N271 834 aa20.1■□□□□ 0.81
SEC13-215ENST00000477547 IL17REQ8NFR9 667 aa20.1■□□□□ 0.81
SEC13-215ENST00000477547 THUMPD2Q9BTF0 503 aaKnown RBP20.1■□□□□ 0.81
SEC13-215ENST00000477547 TRIM35Q9UPQ4 493 aa20.1■□□□□ 0.81
SEC13-215ENST00000477547 ERVV-2B6SEH9 535 aa20.09■□□□□ 0.81
SEC13-215ENST00000477547 TEFQ10587 303 aa20.09■□□□□ 0.81
SEC13-215ENST00000477547 TMOD3Q9NYL9 352 aa20.09■□□□□ 0.81
SEC13-215ENST00000477547 SALL2Q9Y467 1007 aaPredicted RBP20.09■□□□□ 0.81
SEC13-215ENST00000477547 PRIM1P49642 420 aaKnown RBP20.08■□□□□ 0.81
SEC13-215ENST00000477547 CABP4P57796 275 aa20.08■□□□□ 0.81
SEC13-215ENST00000477547 SLC52A2Q9HAB3 445 aa20.08■□□□□ 0.81
SEC13-215ENST00000477547 CCDC27Q2M243 656 aa20.07■□□□□ 0.8
SEC13-215ENST00000477547 NGEFQ8N5V2 710 aa20.07■□□□□ 0.8
SEC13-215ENST00000477547 FHDC1Q9C0D6 1143 aaPredicted RBP20.07■□□□□ 0.8
SEC13-215ENST00000477547 LAMB4A4D0S4 1761 aa20.07■□□□□ 0.8
SEC13-215ENST00000477547 C1QTNF8P60827 252 aa20.06■□□□□ 0.8
SEC13-215ENST00000477547 HNRNPUQ00839 825 aaKnown RBP eCLIP20.06■□□□□ 0.8
SEC13-215ENST00000477547 NCBP3Q53F19 620 aaKnown RBP20.06■□□□□ 0.8
SEC13-215ENST00000477547 SYT17Q9BSW7 474 aa20.06■□□□□ 0.8
SEC13-215ENST00000477547 CICQ96RK0 1608 aaPredicted RBP20.06■□□□□ 0.8
SEC13-215ENST00000477547 C5P01031 1676 aa20.06■□□□□ 0.8
SEC13-215ENST00000477547 ZNF831Q5JPB2 1677 aa20.05■□□□□ 0.8
SEC13-215ENST00000477547 TAF1LQ8IZX4 1826 aa20.05■□□□□ 0.8
SEC13-215ENST00000477547 WWC1Q8IX03 1113 aa20.04■□□□□ 0.8
SEC13-215ENST00000477547 TJP1Q07157 1748 aa20.04■□□□□ 0.8
SEC13-215ENST00000477547 KCPQ6ZWJ8 1503 aa20.04■□□□□ 0.8
SEC13-215ENST00000477547 NFATC2IPQ8NCF5 419 aa20.03■□□□□ 0.8
SEC13-215ENST00000477547 PIGBQ92521 554 aa20.03■□□□□ 0.8
SEC13-215ENST00000477547 CHD4Q14839 1912 aa20.03■□□□□ 0.8
SEC13-215ENST00000477547 COL5A3P25940 1745 aaPredicted RBP20.03■□□□□ 0.8
SEC13-215ENST00000477547 CALD1Q05682 793 aaKnown RBP20.02■□□□□ 0.8
SEC13-215ENST00000477547 STK32BQ9NY57 414 aa20.02■□□□□ 0.8
SEC13-215ENST00000477547 TXNRD1Q16881 649 aa20.02■□□□□ 0.79
SEC13-215ENST00000477547 PALLDQ8WX93 1383 aa20.01■□□□□ 0.79
SEC13-215ENST00000477547 ZNF521Q96K83 1311 aa20.01■□□□□ 0.79
SEC13-215ENST00000477547 SLC15A2Q16348 729 aa20.01■□□□□ 0.79
SEC13-215ENST00000477547 SGIP1Q9BQI5 828 aa20■□□□□ 0.79
SEC13-215ENST00000477547 BTBD11A6QL63 1104 aa19.99■□□□□ 0.79
SEC13-215ENST00000477547 TAF7Q15545 349 aaPredicted RBP19.99■□□□□ 0.79
SEC13-215ENST00000477547 IFFO2Q5TF58 517 aa19.99■□□□□ 0.79
SEC13-215ENST00000477547 ASAP1Q9ULH1 1129 aa19.99■□□□□ 0.79
SEC13-215ENST00000477547 LAS1LQ9Y4W2 734 aaKnown RBP19.99■□□□□ 0.79
SEC13-215ENST00000477547 SLC39A6Q13433 755 aa19.98■□□□□ 0.79
SEC13-215ENST00000477547 TTC5Q8N0Z6 440 aa19.98■□□□□ 0.79
SEC13-215ENST00000477547 MTFR1LQ9H019 292 aa19.98■□□□□ 0.79
SEC13-215ENST00000477547 ATG3Q9NT62 314 aa19.98■□□□□ 0.79
SEC13-215ENST00000477547 IFT57Q9NWB7 429 aa19.98■□□□□ 0.79
SEC13-215ENST00000477547 TSPYL4Q9UJ04 414 aa19.98■□□□□ 0.79
SEC13-215ENST00000477547 IL16Q14005 1332 aa19.97■□□□□ 0.79
SEC13-215ENST00000477547 ZBED9Q6R2W3 1325 aa19.97■□□□□ 0.79
SEC13-215ENST00000477547 WDR63Q8IWG1 891 aa19.97■□□□□ 0.79
SEC13-215ENST00000477547 SMARCC1Q92922 1105 aaPredicted RBP19.97■□□□□ 0.79
SEC13-215ENST00000477547 YTHDC1Q96MU7 727 aaKnown RBP19.97■□□□□ 0.79
SEC13-215ENST00000477547 GNAI1P63096 354 aa19.96■□□□□ 0.79
SEC13-215ENST00000477547 MIS18AQ9NYP9 233 aa19.96■□□□□ 0.79
SEC13-215ENST00000477547 ZNF790Q6PG37 636 aa19.95■□□□□ 0.78
SEC13-215ENST00000477547 CFAP44Q96MT7 982 aa19.95■□□□□ 0.78
SEC13-215ENST00000477547 TUBGCP6Q96RT7 1819 aa19.94■□□□□ 0.78
SEC13-215ENST00000477547 ARXQ96QS3 562 aa19.94■□□□□ 0.78
SEC13-215ENST00000477547 MBIPQ9NS73 344 aa19.94■□□□□ 0.78
SEC13-215ENST00000477547 BABAM1Q9NWV8 329 aa19.94■□□□□ 0.78
SEC13-215ENST00000477547 C4BP0C0L5 1744 aa19.94■□□□□ 0.78
SEC13-215ENST00000477547 CHL1O00533 1208 aa19.93■□□□□ 0.78
SEC13-215ENST00000477547 KCNQ3O43525 872 aa19.93■□□□□ 0.78
SEC13-215ENST00000477547 ZNF853P0CG23 659 aa19.93■□□□□ 0.78
SEC13-215ENST00000477547 GOLGA2Q08379 1002 aa19.93■□□□□ 0.78
SEC13-215ENST00000477547 FANCIQ9NVI1 1328 aa19.93■□□□□ 0.78
SEC13-215ENST00000477547 PTCD1O75127 700 aaKnown RBP19.92■□□□□ 0.78
SEC13-215ENST00000477547 TSR2Q969E8 191 aaKnown RBP19.92■□□□□ 0.78
SEC13-215ENST00000477547 RBM42Q9BTD8 480 aaKnown RBP19.92■□□□□ 0.78
SEC13-215ENST00000477547 HEG1Q9ULI3 1381 aa19.92■□□□□ 0.78
SEC13-215ENST00000477547 ZNF496Q96IT1 587 aaPredicted RBP19.91■□□□□ 0.78
SEC13-215ENST00000477547 LOC102724428A0A0B4J2F2 783 aa19.9■□□□□ 0.78
SEC13-215ENST00000477547 SIK1P57059 783 aa19.9■□□□□ 0.78
SEC13-215ENST00000477547 GPR162Q16538 588 aa19.9■□□□□ 0.78
SEC13-215ENST00000477547 FMNL2Q96PY5 1086 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms