RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 SLC52A2Q9HAB3 445 aa20.95■□□□□ 0.94
COPS3-207ENST00000477299 CEMIPQ8WUJ3 1361 aa20.95■□□□□ 0.94
COPS3-207ENST00000477299 KCNQ4P56696 695 aa20.94■□□□□ 0.94
COPS3-207ENST00000477299 PROM2Q8N271 834 aa20.94■□□□□ 0.94
COPS3-207ENST00000477299 MRC1P22897 1456 aa20.94■□□□□ 0.94
COPS3-207ENST00000477299 SLC39A6Q13433 755 aa20.93■□□□□ 0.94
COPS3-207ENST00000477299 SF3B2Q13435 895 aaKnown RBP20.93■□□□□ 0.94
COPS3-207ENST00000477299 CCDC125Q86Z20 511 aa20.93■□□□□ 0.94
COPS3-207ENST00000477299 RTF1Q92541 710 aaKnown RBP20.93■□□□□ 0.94
COPS3-207ENST00000477299 CAMKK2Q96RR4 588 aa20.93■□□□□ 0.94
COPS3-207ENST00000477299 ATG3Q9NT62 314 aa20.93■□□□□ 0.94
COPS3-207ENST00000477299 MIS18AQ9NYP9 233 aa20.93■□□□□ 0.94
COPS3-207ENST00000477299 LY75O60449 1722 aa20.92■□□□□ 0.94
COPS3-207ENST00000477299 KCNQ3O43525 872 aa20.92■□□□□ 0.94
COPS3-207ENST00000477299 HTATSF1O43719 755 aaKnown RBP20.92■□□□□ 0.94
COPS3-207ENST00000477299 TEFQ10587 303 aa20.9■□□□□ 0.94
COPS3-207ENST00000477299 PAPPAQ13219 1627 aa20.89■□□□□ 0.94
COPS3-207ENST00000477299 PLSCR1O15162 318 aa20.89■□□□□ 0.93
COPS3-207ENST00000477299 BAG6P46379 1132 aa20.89■□□□□ 0.93
COPS3-207ENST00000477299 SLC4A9Q96Q91 983 aa20.88■□□□□ 0.93
COPS3-207ENST00000477299 LRRC4BQ9NT99 713 aa20.88■□□□□ 0.93
COPS3-207ENST00000477299 PALLDQ8WX93 1383 aa20.87■□□□□ 0.93
COPS3-207ENST00000477299 RREB1Q92766 1687 aa20.87■□□□□ 0.93
COPS3-207ENST00000477299 TXNRD1Q16881 649 aa20.87■□□□□ 0.93
COPS3-207ENST00000477299 RGPD3A6NKT7 1758 aaPredicted RBP20.87■□□□□ 0.93
COPS3-207ENST00000477299 RGPD4Q7Z3J3 1758 aa20.87■□□□□ 0.93
COPS3-207ENST00000477299 TAF1LQ8IZX4 1826 aa20.86■□□□□ 0.93
COPS3-207ENST00000477299 TAF7Q15545 349 aaPredicted RBP20.86■□□□□ 0.93
COPS3-207ENST00000477299 UBR2Q8IWV8 1755 aa20.86■□□□□ 0.93
COPS3-207ENST00000477299 NUP188Q5SRE5 1749 aa20.86■□□□□ 0.93
COPS3-207ENST00000477299 KDM3BQ7LBC6 1761 aa20.85■□□□□ 0.93
COPS3-207ENST00000477299 BTBD11A6QL63 1104 aa20.85■□□□□ 0.93
COPS3-207ENST00000477299 PTCD1O75127 700 aaKnown RBP20.85■□□□□ 0.93
COPS3-207ENST00000477299 RBM42Q9BTD8 480 aaKnown RBP20.85■□□□□ 0.93
COPS3-207ENST00000477299 WWC1Q8IX03 1113 aa20.84■□□□□ 0.93
COPS3-207ENST00000477299 KCPQ6ZWJ8 1503 aa20.83■□□□□ 0.93
COPS3-207ENST00000477299 LMOD3Q0VAK6 560 aa20.83■□□□□ 0.93
COPS3-207ENST00000477299 SMARCC1Q92922 1105 aaPredicted RBP20.83■□□□□ 0.93
COPS3-207ENST00000477299 LAS1LQ9Y4W2 734 aaKnown RBP20.83■□□□□ 0.93
COPS3-207ENST00000477299 ITPK1Q13572 414 aa20.82■□□□□ 0.92
COPS3-207ENST00000477299 ZNF790Q6PG37 636 aa20.82■□□□□ 0.92
COPS3-207ENST00000477299 TJP1Q07157 1748 aa20.81■□□□□ 0.92
COPS3-207ENST00000477299 LOC102724428A0A0B4J2F2 783 aa20.81■□□□□ 0.92
COPS3-207ENST00000477299 SIK1P57059 783 aa20.81■□□□□ 0.92
COPS3-207ENST00000477299 ZNF496Q96IT1 587 aaPredicted RBP20.81■□□□□ 0.92
COPS3-207ENST00000477299 CCNL1Q9UK58 526 aaPredicted RBP20.81■□□□□ 0.92
COPS3-207ENST00000477299 MYH14Q7Z406 1995 aaKnown RBP20.8■□□□□ 0.92
COPS3-207ENST00000477299 CCDC27Q2M243 656 aa20.8■□□□□ 0.92
COPS3-207ENST00000477299 SPINK5Q9NQ38 1064 aaPredicted RBP20.8■□□□□ 0.92
COPS3-207ENST00000477299 C5P01031 1676 aa20.8■□□□□ 0.92
COPS3-207ENST00000477299 PRAMEF22A3QJZ6 481 aa20.79■□□□□ 0.92
COPS3-207ENST00000477299 ATP6V1AP38606 617 aa20.79■□□□□ 0.92
COPS3-207ENST00000477299 CHL1O00533 1208 aa20.78■□□□□ 0.92
COPS3-207ENST00000477299 ANO8Q9HCE9 1232 aaPredicted RBP20.78■□□□□ 0.92
COPS3-207ENST00000477299 COL5A3P25940 1745 aaPredicted RBP20.78■□□□□ 0.92
COPS3-207ENST00000477299 TUBGCP6Q96RT7 1819 aa20.77■□□□□ 0.92
COPS3-207ENST00000477299 ZNF853P0CG23 659 aa20.77■□□□□ 0.92
COPS3-207ENST00000477299 KRT24Q2M2I5 525 aa20.77■□□□□ 0.92
COPS3-207ENST00000477299 SMIM5Q71RC9 77 aa20.77■□□□□ 0.92
COPS3-207ENST00000477299 DNAJC10Q8IXB1 793 aa20.77■□□□□ 0.92
COPS3-207ENST00000477299 TTC5Q8N0Z6 440 aa20.77■□□□□ 0.92
COPS3-207ENST00000477299 LINC00116Q8NCU8 138 aa20.77■□□□□ 0.92
COPS3-207ENST00000477299 TSPYL4Q9UJ04 414 aa20.77■□□□□ 0.92
COPS3-207ENST00000477299 ZNF521Q96K83 1311 aa20.76■□□□□ 0.91
COPS3-207ENST00000477299 ZNF831Q5JPB2 1677 aa20.75■□□□□ 0.91
COPS3-207ENST00000477299 EIF4A1P60842 406 aaKnown RBP20.75■□□□□ 0.91
COPS3-207ENST00000477299 ZNF827Q17R98 1081 aa20.75■□□□□ 0.91
COPS3-207ENST00000477299 NCBP3Q53F19 620 aaKnown RBP20.75■□□□□ 0.91
COPS3-207ENST00000477299 SLC27A3Q5K4L6 730 aa20.75■□□□□ 0.91
COPS3-207ENST00000477299 CFAP44Q96MT7 982 aa20.75■□□□□ 0.91
COPS3-207ENST00000477299 MBIPQ9NS73 344 aa20.75■□□□□ 0.91
COPS3-207ENST00000477299 HNRNPUQ00839 825 aaKnown RBP eCLIP20.74■□□□□ 0.91
COPS3-207ENST00000477299 TSR2Q969E8 191 aaKnown RBP20.74■□□□□ 0.91
COPS3-207ENST00000477299 HEG1Q9ULI3 1381 aa20.73■□□□□ 0.91
COPS3-207ENST00000477299 C4BP0C0L5 1744 aa20.73■□□□□ 0.91
COPS3-207ENST00000477299 AMIGO3Q86WK7 504 aa20.73■□□□□ 0.91
COPS3-207ENST00000477299 USP16Q9Y5T5 823 aa20.73■□□□□ 0.91
COPS3-207ENST00000477299 WDR63Q8IWG1 891 aa20.72■□□□□ 0.91
COPS3-207ENST00000477299 CDCA7LQ96GN5 454 aa20.72■□□□□ 0.91
COPS3-207ENST00000477299 FMNL2Q96PY5 1086 aa20.72■□□□□ 0.91
COPS3-207ENST00000477299 IFT57Q9NWB7 429 aa20.72■□□□□ 0.91
COPS3-207ENST00000477299 CICQ96RK0 1608 aaPredicted RBP20.71■□□□□ 0.91
COPS3-207ENST00000477299 GNAI1P63096 354 aa20.71■□□□□ 0.91
COPS3-207ENST00000477299 AKT1S1Q96B36 256 aa20.71■□□□□ 0.91
COPS3-207ENST00000477299 UBR3Q6ZT12 1888 aa20.71■□□□□ 0.91
COPS3-207ENST00000477299 BABAM1Q9NWV8 329 aa20.7■□□□□ 0.9
COPS3-207ENST00000477299 PSDA5PKW4 1024 aaPredicted RBP20.69■□□□□ 0.9
COPS3-207ENST00000477299 CYP19A1P11511 503 aaPredicted RBP20.69■□□□□ 0.9
COPS3-207ENST00000477299 PIP4K2AP48426 406 aaPredicted RBP20.69■□□□□ 0.9
COPS3-207ENST00000477299 PDGFDQ9GZP0 370 aaPredicted RBP20.69■□□□□ 0.9
COPS3-207ENST00000477299 ELL2O00472 640 aaPredicted RBP20.68■□□□□ 0.9
COPS3-207ENST00000477299 GIGYF1O75420 1035 aaPredicted RBP20.68■□□□□ 0.9
COPS3-207ENST00000477299 CALD1Q05682 793 aaKnown RBP20.68■□□□□ 0.9
COPS3-207ENST00000477299 R3HDM1Q15032 1099 aaKnown RBP20.68■□□□□ 0.9
COPS3-207ENST00000477299 SLC15A2Q16348 729 aa20.68■□□□□ 0.9
COPS3-207ENST00000477299 INTS5Q6P9B9 1019 aaKnown RBP20.68■□□□□ 0.9
COPS3-207ENST00000477299 VSIG10Q8N0Z9 540 aa20.68■□□□□ 0.9
COPS3-207ENST00000477299 NGEFQ8N5V2 710 aa20.68■□□□□ 0.9
COPS3-207ENST00000477299 C8orf58Q8NAV2 365 aa20.68■□□□□ 0.9
COPS3-207ENST00000477299 IL16Q14005 1332 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms