RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 PCDHGA10Q9Y5H3 936 aa3.85□□□□□ -1.79
HMGN4-202ENST00000477243 COL4A3BPQ9Y5P4 624 aa3.85□□□□□ -1.79
HMGN4-202ENST00000477243 BCL9LQ86UU0 1499 aa3.85□□□□□ -1.79
HMGN4-202ENST00000477243 CREB3O43889 395 aa3.84□□□□□ -1.79
HMGN4-202ENST00000477243 DNAJC6O75061 913 aa3.84□□□□□ -1.79
HMGN4-202ENST00000477243 FXR1P51114 621 aaKnown RBP eCLIP3.84□□□□□ -1.79
HMGN4-202ENST00000477243 FANCCQ00597 558 aa3.84□□□□□ -1.79
HMGN4-202ENST00000477243 DPYDQ12882 1025 aa3.84□□□□□ -1.79
HMGN4-202ENST00000477243 SLFNL1Q499Z3 407 aa3.84□□□□□ -1.79
HMGN4-202ENST00000477243 TMC4Q7Z404 712 aa3.84□□□□□ -1.79
HMGN4-202ENST00000477243 APBB1IPQ7Z5R6 666 aaPredicted RBP3.84□□□□□ -1.79
HMGN4-202ENST00000477243 FILIP1Q7Z7B0 1213 aa3.84□□□□□ -1.79
HMGN4-202ENST00000477243 NLGN1Q8N2Q7 840 aa3.84□□□□□ -1.79
HMGN4-202ENST00000477243 VTI1AQ96AJ9 217 aa3.84□□□□□ -1.79
HMGN4-202ENST00000477243 CITED4Q96RK1 184 aa3.84□□□□□ -1.79
HMGN4-202ENST00000477243 SPOCK3Q9BQ16 436 aa3.84□□□□□ -1.79
HMGN4-202ENST00000477243 RBCK1Q9BYM8 510 aa3.84□□□□□ -1.79
HMGN4-202ENST00000477243 PCDH12Q9NPG4 1184 aa3.84□□□□□ -1.79
HMGN4-202ENST00000477243 IFT57Q9NWB7 429 aa3.84□□□□□ -1.79
HMGN4-202ENST00000477243 CXXC1Q9P0U4 656 aaPredicted RBP3.84□□□□□ -1.79
HMGN4-202ENST00000477243 INPP5FQ9Y2H2 1132 aa3.84□□□□□ -1.79
HMGN4-202ENST00000477243 PRKAB1Q9Y478 270 aa3.84□□□□□ -1.79
HMGN4-202ENST00000477243 MEGF6O75095 1541 aa3.84□□□□□ -1.8
HMGN4-202ENST00000477243 LRRC7Q96NW7 1537 aa3.84□□□□□ -1.8
HMGN4-202ENST00000477243 BDP1A6H8Y1 2624 aa3.84□□□□□ -1.8
HMGN4-202ENST00000477243 ZBBXA8MT70 800 aa3.83□□□□□ -1.8
HMGN4-202ENST00000477243 PPP1R3GB7ZBB8 358 aa3.83□□□□□ -1.8
HMGN4-202ENST00000477243 PIK3CDO00329 1044 aa3.83□□□□□ -1.8
HMGN4-202ENST00000477243 U2SURPO15042 1029 aaKnown RBP3.83□□□□□ -1.8
HMGN4-202ENST00000477243 HOXA2O43364 376 aa3.83□□□□□ -1.8
HMGN4-202ENST00000477243 PTCD1O75127 700 aaKnown RBP3.83□□□□□ -1.8
HMGN4-202ENST00000477243 PRPF40AO75400 957 aaKnown RBP3.83□□□□□ -1.8
HMGN4-202ENST00000477243 FMNL1O95466 1100 aaPredicted RBP3.83□□□□□ -1.8
HMGN4-202ENST00000477243 S100BP04271 92 aaPredicted RBP3.83□□□□□ -1.8
HMGN4-202ENST00000477243 P4HBP07237 508 aaKnown RBP3.83□□□□□ -1.8
HMGN4-202ENST00000477243 XRCC5P13010 732 aaKnown RBP3.83□□□□□ -1.8
HMGN4-202ENST00000477243 TIE1P35590 1138 aa3.83□□□□□ -1.8
HMGN4-202ENST00000477243 PRSS12P56730 875 aa3.83□□□□□ -1.8
HMGN4-202ENST00000477243 PLCB3Q01970 1234 aa3.83□□□□□ -1.8
HMGN4-202ENST00000477243 CACNB1Q02641 598 aaPredicted RBP3.83□□□□□ -1.8
HMGN4-202ENST00000477243 ZNF211Q13398 564 aaPredicted RBP3.83□□□□□ -1.8
HMGN4-202ENST00000477243 BIRC2Q13490 618 aa3.83□□□□□ -1.8
HMGN4-202ENST00000477243 NCOA4Q13772 614 aa3.83□□□□□ -1.8
HMGN4-202ENST00000477243 NR6A1Q15406 480 aa3.83□□□□□ -1.8
HMGN4-202ENST00000477243 EML3Q32P44 896 aa3.83□□□□□ -1.8
HMGN4-202ENST00000477243 MAP7D1Q3KQU3 841 aa3.83□□□□□ -1.8
HMGN4-202ENST00000477243 GRIPAP1Q4V328 841 aa3.83□□□□□ -1.8
HMGN4-202ENST00000477243 C6orf132Q5T0Z8 1188 aa3.83□□□□□ -1.8
HMGN4-202ENST00000477243 LDLRAD1Q5T700 205 aa3.83□□□□□ -1.8
HMGN4-202ENST00000477243 DPY19L2Q6NUT2 758 aa3.83□□□□□ -1.8
HMGN4-202ENST00000477243 PPP1R18Q6NYC8 613 aa3.83□□□□□ -1.8
HMGN4-202ENST00000477243 DEPDC4Q8N2C3 294 aa3.83□□□□□ -1.8
HMGN4-202ENST00000477243 OGFOD1Q8N543 542 aa3.83□□□□□ -1.8
HMGN4-202ENST00000477243 EPS8L1Q8TE68 723 aa3.83□□□□□ -1.8
HMGN4-202ENST00000477243 GTF3C2Q8WUA4 911 aaPredicted RBP3.83□□□□□ -1.8
HMGN4-202ENST00000477243 PMM1Q92871 262 aa3.83□□□□□ -1.8
HMGN4-202ENST00000477243 IRF2BPLQ9H1B7 796 aa3.83□□□□□ -1.8
HMGN4-202ENST00000477243 SLKQ9H2G2 1235 aaPredicted RBP3.83□□□□□ -1.8
HMGN4-202ENST00000477243 ACBD3Q9H3P7 528 aa3.83□□□□□ -1.8
HMGN4-202ENST00000477243 CLASP1Q7Z460 1538 aa3.83□□□□□ -1.8
HMGN4-202ENST00000477243 WDR90Q96KV7 1748 aa3.83□□□□□ -1.8
HMGN4-202ENST00000477243 ANKRD11Q6UB99 2663 aaPredicted RBP3.82□□□□□ -1.8
HMGN4-202ENST00000477243 ADAMTS7Q9UKP4 1686 aa3.82□□□□□ -1.8
HMGN4-202ENST00000477243 LAMC3Q9Y6N6 1575 aa3.82□□□□□ -1.8
HMGN4-202ENST00000477243 ATAD2BQ9ULI0 1458 aa3.82□□□□□ -1.8
HMGN4-202ENST00000477243 ENPP3O14638 875 aa3.82□□□□□ -1.8
HMGN4-202ENST00000477243 PRMT3O60678 531 aa3.82□□□□□ -1.8
HMGN4-202ENST00000477243 FAM13AO94988 1023 aa3.82□□□□□ -1.8
HMGN4-202ENST00000477243 DNAJB2P25686 324 aa3.82□□□□□ -1.8
HMGN4-202ENST00000477243 IRX6P78412 446 aaPredicted RBP3.82□□□□□ -1.8
HMGN4-202ENST00000477243 DAB2P98082 770 aa3.82□□□□□ -1.8
HMGN4-202ENST00000477243 ARHGAP4P98171 946 aa3.82□□□□□ -1.8
HMGN4-202ENST00000477243 ATP2B2Q01814 1243 aa3.82□□□□□ -1.8
HMGN4-202ENST00000477243 PSMD2Q13200 908 aa3.82□□□□□ -1.8
HMGN4-202ENST00000477243 PLEKHG6Q3KR16 790 aa3.82□□□□□ -1.8
HMGN4-202ENST00000477243 LONRF3Q496Y0 759 aa3.82□□□□□ -1.8
HMGN4-202ENST00000477243 NBPF6Q5VWK0 638 aa3.82□□□□□ -1.8
HMGN4-202ENST00000477243 CCDC146Q8IYE0 955 aa3.82□□□□□ -1.8
HMGN4-202ENST00000477243 ZNF654Q8IZM8 581 aa3.82□□□□□ -1.8
HMGN4-202ENST00000477243 RDH13Q8NBN7 331 aa3.82□□□□□ -1.8
HMGN4-202ENST00000477243 MKL1Q969V6 931 aa3.82□□□□□ -1.8
HMGN4-202ENST00000477243 NBPF4Q96M43 638 aa3.82□□□□□ -1.8
HMGN4-202ENST00000477243 FRMD6Q96NE9 622 aa3.82□□□□□ -1.8
HMGN4-202ENST00000477243 EYA1Q99502 592 aa3.82□□□□□ -1.8
HMGN4-202ENST00000477243 ANO2Q9NQ90 1003 aa3.82□□□□□ -1.8
HMGN4-202ENST00000477243 TYW1Q9NV66 732 aaKnown RBP3.82□□□□□ -1.8
HMGN4-202ENST00000477243 DNAAF2Q9NVR5 837 aaKnown RBP3.82□□□□□ -1.8
HMGN4-202ENST00000477243 VTI1BQ9UEU0 232 aa3.82□□□□□ -1.8
HMGN4-202ENST00000477243 PARP2Q9UGN5 583 aa3.82□□□□□ -1.8
HMGN4-202ENST00000477243 LAS1LQ9Y4W2 734 aaKnown RBP3.82□□□□□ -1.8
HMGN4-202ENST00000477243 CHD1O14646 1710 aa3.81□□□□□ -1.8
HMGN4-202ENST00000477243 AHDC1Q5TGY3 1603 aaPredicted RBP3.81□□□□□ -1.8
HMGN4-202ENST00000477243 TREHO43280 583 aa3.81□□□□□ -1.8
HMGN4-202ENST00000477243 NDUFB5O43674 189 aa3.81□□□□□ -1.8
HMGN4-202ENST00000477243 SH3BP5O60239 455 aa3.81□□□□□ -1.8
HMGN4-202ENST00000477243 LDHBP07195 334 aaKnown RBP3.81□□□□□ -1.8
HMGN4-202ENST00000477243 GCGRP47871 477 aa3.81□□□□□ -1.8
HMGN4-202ENST00000477243 SEC13P55735 322 aa3.81□□□□□ -1.8
HMGN4-202ENST00000477243 PDE3BQ13370 1112 aa3.81□□□□□ -1.8
HMGN4-202ENST00000477243 BMS1Q14692 1282 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms