RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 INTS3Q68E01 1043 aaKnown RBP16.71■□□□□ 0.27
HDAC7-221ENST00000477203 KIAA0232Q92628 1395 aa16.71■□□□□ 0.27
HDAC7-221ENST00000477203 GSE1Q14687 1217 aa16.7■□□□□ 0.26
HDAC7-221ENST00000477203 AIMP1Q12904 312 aaKnown RBP16.7■□□□□ 0.26
HDAC7-221ENST00000477203 CEP85Q6P2H3 762 aa16.7■□□□□ 0.26
HDAC7-221ENST00000477203 RAPGEF4Q8WZA2 1011 aa16.7■□□□□ 0.26
HDAC7-221ENST00000477203 RGS12O14924 1447 aa16.69■□□□□ 0.26
HDAC7-221ENST00000477203 NFAT5O94916 1531 aa16.69■□□□□ 0.26
HDAC7-221ENST00000477203 CHMP4BQ9H444 224 aaKnown RBP16.69■□□□□ 0.26
HDAC7-221ENST00000477203 KDM4FA0A1W2PPD8 638 aa16.68■□□□□ 0.26
HDAC7-221ENST00000477203 CADPS2Q86UW7 1296 aa16.68■□□□□ 0.26
HDAC7-221ENST00000477203 RGPD5Q99666 1765 aa16.68■□□□□ 0.26
HDAC7-221ENST00000477203 GCC1Q96CN9 775 aa16.68■□□□□ 0.26
HDAC7-221ENST00000477203 PXDNQ92626 1479 aa16.68■□□□□ 0.26
HDAC7-221ENST00000477203 PTPRCP08575 1304 aa16.68■□□□□ 0.26
HDAC7-221ENST00000477203 ZMYND15Q9H091 742 aa16.68■□□□□ 0.26
HDAC7-221ENST00000477203 PROSER3Q2NL68 480 aa16.67■□□□□ 0.26
HDAC7-221ENST00000477203 EIF4A1P60842 406 aaKnown RBP16.67■□□□□ 0.26
HDAC7-221ENST00000477203 STRN4Q9NRL3 753 aa16.67■□□□□ 0.26
HDAC7-221ENST00000477203 LRRFIP2Q9Y608 721 aaKnown RBP16.67■□□□□ 0.26
HDAC7-221ENST00000477203 RTL1A6NKG5 1358 aa16.67■□□□□ 0.26
HDAC7-221ENST00000477203 RNMTO43148 476 aaKnown RBP16.66■□□□□ 0.26
HDAC7-221ENST00000477203 AKAP4Q5JQC9 854 aa16.66■□□□□ 0.26
HDAC7-221ENST00000477203 C22orf23Q9BZE7 217 aa16.66■□□□□ 0.26
HDAC7-221ENST00000477203 ERBB3P21860 1342 aa16.66■□□□□ 0.26
HDAC7-221ENST00000477203 HTATSF1O43719 755 aaKnown RBP16.66■□□□□ 0.26
HDAC7-221ENST00000477203 ANKRD44Q8N8A2 993 aa16.66■□□□□ 0.26
HDAC7-221ENST00000477203 PI4KAP2A4QPH2 592 aa16.65■□□□□ 0.26
HDAC7-221ENST00000477203 PI4KAP1Q8N8J0 262 aa16.65■□□□□ 0.26
HDAC7-221ENST00000477203 STRCP1A6NGW2 1772 aa16.65■□□□□ 0.26
HDAC7-221ENST00000477203 PNMA6EA0A0J9YXQ4 647 aa16.65■□□□□ 0.26
HDAC7-221ENST00000477203 NFATC2IPQ8NCF5 419 aa16.65■□□□□ 0.26
HDAC7-221ENST00000477203 MST1RQ04912 1400 aa16.65■□□□□ 0.26
HDAC7-221ENST00000477203 KIF24Q5T7B8 1368 aa16.64■□□□□ 0.25
HDAC7-221ENST00000477203 MYL6BP14649 208 aa16.64■□□□□ 0.25
HDAC7-221ENST00000477203 ARXQ96QS3 562 aa16.64■□□□□ 0.25
HDAC7-221ENST00000477203 NPHP3Q7Z494 1330 aa16.64■□□□□ 0.25
HDAC7-221ENST00000477203 TBC1D32Q96NH3 1257 aa16.64■□□□□ 0.25
HDAC7-221ENST00000477203 PRDM11Q9NQV5 511 aa16.64■□□□□ 0.25
HDAC7-221ENST00000477203 BRINP3Q76B58 766 aa16.63■□□□□ 0.25
HDAC7-221ENST00000477203 DCTPP1Q9H773 170 aa16.63■□□□□ 0.25
HDAC7-221ENST00000477203 GNAI2P04899 355 aa16.63■□□□□ 0.25
HDAC7-221ENST00000477203 CCT4P50991 539 aaKnown RBP16.63■□□□□ 0.25
HDAC7-221ENST00000477203 IL1RAPL2Q9NP60 686 aa16.63■□□□□ 0.25
HDAC7-221ENST00000477203 GLIPR1L2Q4G1C9 344 aa16.62■□□□□ 0.25
HDAC7-221ENST00000477203 PLEKHM2Q8IWE5 1019 aa16.62■□□□□ 0.25
HDAC7-221ENST00000477203 JARID2Q92833 1246 aaPredicted RBP16.62■□□□□ 0.25
HDAC7-221ENST00000477203 FOXD4L1Q9NU39 408 aa16.62■□□□□ 0.25
HDAC7-221ENST00000477203 PODXL2Q9NZ53 605 aa16.62■□□□□ 0.25
HDAC7-221ENST00000477203 GSPT1P15170 499 aaKnown RBP16.62■□□□□ 0.25
HDAC7-221ENST00000477203 TATP17735 454 aaPredicted RBP16.61■□□□□ 0.25
HDAC7-221ENST00000477203 AMOTQ4VCS5 1084 aa16.61■□□□□ 0.25
HDAC7-221ENST00000477203 TBC1D9Q6ZT07 1266 aa16.61■□□□□ 0.25
HDAC7-221ENST00000477203 ATP10DQ9P241 1426 aa16.61■□□□□ 0.25
HDAC7-221ENST00000477203 NBPF7P0C2Y1 421 aaPredicted RBP16.61■□□□□ 0.25
HDAC7-221ENST00000477203 TOM1L2Q6ZVM7 507 aa16.61■□□□□ 0.25
HDAC7-221ENST00000477203 UBTFL1P0CB47 393 aaPredicted RBP16.61■□□□□ 0.25
HDAC7-221ENST00000477203 RPAP2Q8IXW5 612 aaPredicted RBP16.61■□□□□ 0.25
HDAC7-221ENST00000477203 SLAIN2Q9P270 581 aa16.61■□□□□ 0.25
HDAC7-221ENST00000477203 DDX54Q8TDD1 881 aaKnown RBP16.6■□□□□ 0.25
HDAC7-221ENST00000477203 USP44Q9H0E7 712 aa16.6■□□□□ 0.25
HDAC7-221ENST00000477203 CWF19L2Q2TBE0 894 aaKnown RBP16.6■□□□□ 0.25
HDAC7-221ENST00000477203 TBC1D2Q9BYX2 928 aa16.6■□□□□ 0.25
HDAC7-221ENST00000477203 NFKBIBQ15653 356 aa16.59■□□□□ 0.25
HDAC7-221ENST00000477203 RBM42Q9BTD8 480 aaKnown RBP16.59■□□□□ 0.25
HDAC7-221ENST00000477203 CEMIPQ8WUJ3 1361 aa16.59■□□□□ 0.25
HDAC7-221ENST00000477203 SRCIN1Q9C0H9 1055 aa16.59■□□□□ 0.25
HDAC7-221ENST00000477203 A0A0G2JS52 829 aa16.58■□□□□ 0.24
HDAC7-221ENST00000477203 HMMRO75330 724 aa16.58■□□□□ 0.24
HDAC7-221ENST00000477203 MAP4K4O95819 1239 aaPredicted RBP16.58■□□□□ 0.24
HDAC7-221ENST00000477203 BECN1Q14457 450 aa16.58■□□□□ 0.24
HDAC7-221ENST00000477203 FRAT2O75474 233 aaPredicted RBP16.58■□□□□ 0.24
HDAC7-221ENST00000477203 MED1Q15648 1581 aaPredicted RBP16.58■□□□□ 0.24
HDAC7-221ENST00000477203 BMP2KLQ5H9B9 411 aa16.58■□□□□ 0.24
HDAC7-221ENST00000477203 MAP3K2Q9Y2U5 619 aa16.58■□□□□ 0.24
HDAC7-221ENST00000477203 VIRMAQ69YN4 1812 aaKnown RBP16.58■□□□□ 0.24
HDAC7-221ENST00000477203 GIGYF1O75420 1035 aaPredicted RBP16.57■□□□□ 0.24
HDAC7-221ENST00000477203 SPATA31A3Q5VYP0 1347 aa16.57■□□□□ 0.24
HDAC7-221ENST00000477203 DNAAF4Q8WXU2 420 aa16.56■□□□□ 0.24
HDAC7-221ENST00000477203 ZNF330Q9Y3S2 320 aaPredicted RBP16.56■□□□□ 0.24
HDAC7-221ENST00000477203 CYP27B1O15528 508 aa16.56■□□□□ 0.24
HDAC7-221ENST00000477203 SURF6O75683 361 aaKnown RBP16.56■□□□□ 0.24
HDAC7-221ENST00000477203 NUTM1Q86Y26 1132 aa16.56■□□□□ 0.24
HDAC7-221ENST00000477203 SRGAP3O43295 1099 aa16.56■□□□□ 0.24
HDAC7-221ENST00000477203 GNAI3P08754 354 aa16.56■□□□□ 0.24
HDAC7-221ENST00000477203 PPP1R42Q7Z4L9 355 aa16.56■□□□□ 0.24
HDAC7-221ENST00000477203 RILPL2Q969X0 211 aa16.55■□□□□ 0.24
HDAC7-221ENST00000477203 ZNF496Q96IT1 587 aaPredicted RBP16.55■□□□□ 0.24
HDAC7-221ENST00000477203 C9orf78Q9NZ63 289 aaPredicted RBP16.55■□□□□ 0.24
HDAC7-221ENST00000477203 EVA1CP58658 441 aa16.55■□□□□ 0.24
HDAC7-221ENST00000477203 TRIM6-TRIM34B2RNG4 842 aa16.54■□□□□ 0.24
HDAC7-221ENST00000477203 PTCD1O75127 700 aaKnown RBP16.54■□□□□ 0.24
HDAC7-221ENST00000477203 PHKG2P15735 406 aa16.54■□□□□ 0.24
HDAC7-221ENST00000477203 SDSP20132 328 aa16.54■□□□□ 0.24
HDAC7-221ENST00000477203 MEGF6O75095 1541 aa16.54■□□□□ 0.24
HDAC7-221ENST00000477203 TRPM3Q9HCF6 1732 aaPredicted RBP16.54■□□□□ 0.24
HDAC7-221ENST00000477203 OS9Q13438 667 aaPredicted RBP16.54■□□□□ 0.24
HDAC7-221ENST00000477203 TTC22Q5TAA0 569 aa16.54■□□□□ 0.24
HDAC7-221ENST00000477203 ZNF790Q6PG37 636 aa16.54■□□□□ 0.24
HDAC7-221ENST00000477203 SPG7Q9UQ90 795 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms