RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 RRP7AQ9Y3A4 280 aaKnown RBP19.02■□□□□ 0.64
CCNL1-217ENST00000476367 TXNRD1Q16881 649 aa19.01■□□□□ 0.63
CCNL1-217ENST00000476367 PALLDQ8WX93 1383 aa19.01■□□□□ 0.63
CCNL1-217ENST00000476367 PAPPAQ13219 1627 aa19■□□□□ 0.63
CCNL1-217ENST00000476367 IL17REQ8NFR9 667 aa19■□□□□ 0.63
CCNL1-217ENST00000476367 TRIM35Q9UPQ4 493 aa19■□□□□ 0.63
CCNL1-217ENST00000476367 NFATC2IPQ8NCF5 419 aa19■□□□□ 0.63
CCNL1-217ENST00000476367 CEMIPQ8WUJ3 1361 aa18.99■□□□□ 0.63
CCNL1-217ENST00000476367 PROM2Q8N271 834 aa18.99■□□□□ 0.63
CCNL1-217ENST00000476367 RTF1Q92541 710 aaKnown RBP18.99■□□□□ 0.63
CCNL1-217ENST00000476367 SLC52A2Q9HAB3 445 aa18.99■□□□□ 0.63
CCNL1-217ENST00000476367 ASAP1Q9ULH1 1129 aa18.99■□□□□ 0.63
CCNL1-217ENST00000476367 C5P01031 1676 aa18.99■□□□□ 0.63
CCNL1-217ENST00000476367 TAF1LQ8IZX4 1826 aa18.98■□□□□ 0.63
CCNL1-217ENST00000476367 KCNQ4P56696 695 aa18.98■□□□□ 0.63
CCNL1-217ENST00000476367 DCTN1Q14203 1278 aa18.98■□□□□ 0.63
CCNL1-217ENST00000476367 MCM10Q7L590 875 aa18.97■□□□□ 0.63
CCNL1-217ENST00000476367 RIPK4P57078 832 aa18.96■□□□□ 0.63
CCNL1-217ENST00000476367 TEFQ10587 303 aa18.96■□□□□ 0.63
CCNL1-217ENST00000476367 SMARCC1Q92922 1105 aaPredicted RBP18.96■□□□□ 0.63
CCNL1-217ENST00000476367 NEUROD2Q15784 382 aa18.96■□□□□ 0.63
CCNL1-217ENST00000476367 THUMPD2Q9BTF0 503 aaKnown RBP18.96■□□□□ 0.63
CCNL1-217ENST00000476367 ATG3Q9NT62 314 aa18.96■□□□□ 0.63
CCNL1-217ENST00000476367 CCNL1Q9UK58 526 aaPredicted RBP18.96■□□□□ 0.63
CCNL1-217ENST00000476367 LRRC4BQ9NT99 713 aa18.95■□□□□ 0.62
CCNL1-217ENST00000476367 UBR2Q8IWV8 1755 aa18.95■□□□□ 0.62
CCNL1-217ENST00000476367 SLC27A3Q5K4L6 730 aa18.93■□□□□ 0.62
CCNL1-217ENST00000476367 ANO8Q9HCE9 1232 aaPredicted RBP18.93■□□□□ 0.62
CCNL1-217ENST00000476367 TUBGCP6Q96RT7 1819 aa18.93■□□□□ 0.62
CCNL1-217ENST00000476367 HTATSF1O43719 755 aaKnown RBP18.92■□□□□ 0.62
CCNL1-217ENST00000476367 SLC39A6Q13433 755 aa18.92■□□□□ 0.62
CCNL1-217ENST00000476367 RBM42Q9BTD8 480 aaKnown RBP18.92■□□□□ 0.62
CCNL1-217ENST00000476367 SRCAPQ6ZRS2 3230 aa18.92■□□□□ 0.62
CCNL1-217ENST00000476367 ZNF521Q96K83 1311 aa18.92■□□□□ 0.62
CCNL1-217ENST00000476367 TJP1Q07157 1748 aa18.92■□□□□ 0.62
CCNL1-217ENST00000476367 PTCD1O75127 700 aaKnown RBP18.92■□□□□ 0.62
CCNL1-217ENST00000476367 KCPQ6ZWJ8 1503 aa18.91■□□□□ 0.62
CCNL1-217ENST00000476367 COL5A3P25940 1745 aaPredicted RBP18.91■□□□□ 0.62
CCNL1-217ENST00000476367 LOC102724428A0A0B4J2F2 783 aa18.91■□□□□ 0.62
CCNL1-217ENST00000476367 PSDA5PKW4 1024 aaPredicted RBP18.91■□□□□ 0.62
CCNL1-217ENST00000476367 SIK1P57059 783 aa18.91■□□□□ 0.62
CCNL1-217ENST00000476367 NCBP3Q53F19 620 aaKnown RBP18.91■□□□□ 0.62
CCNL1-217ENST00000476367 ZNF831Q5JPB2 1677 aa18.91■□□□□ 0.62
CCNL1-217ENST00000476367 C4BP0C0L5 1744 aa18.91■□□□□ 0.62
CCNL1-217ENST00000476367 R3HDM1Q15032 1099 aaKnown RBP18.9■□□□□ 0.62
CCNL1-217ENST00000476367 CCDC27Q2M243 656 aa18.9■□□□□ 0.62
CCNL1-217ENST00000476367 NBPF14Q5TI25 921 aa18.9■□□□□ 0.62
CCNL1-217ENST00000476367 WWC1Q8IX03 1113 aa18.9■□□□□ 0.62
CCNL1-217ENST00000476367 KDM3BQ7LBC6 1761 aa18.9■□□□□ 0.62
CCNL1-217ENST00000476367 LMOD3Q0VAK6 560 aa18.89■□□□□ 0.62
CCNL1-217ENST00000476367 SALL2Q9Y467 1007 aaPredicted RBP18.89■□□□□ 0.62
CCNL1-217ENST00000476367 CICQ96RK0 1608 aaPredicted RBP18.89■□□□□ 0.61
CCNL1-217ENST00000476367 ATP6V1AP38606 617 aa18.89■□□□□ 0.61
CCNL1-217ENST00000476367 BTBD11A6QL63 1104 aa18.88■□□□□ 0.61
CCNL1-217ENST00000476367 ZNF827Q17R98 1081 aa18.88■□□□□ 0.61
CCNL1-217ENST00000476367 TTC5Q8N0Z6 440 aa18.88■□□□□ 0.61
CCNL1-217ENST00000476367 STK32BQ9NY57 414 aa18.88■□□□□ 0.61
CCNL1-217ENST00000476367 ITPK1Q13572 414 aa18.87■□□□□ 0.61
CCNL1-217ENST00000476367 SLC4A9Q96Q91 983 aa18.87■□□□□ 0.61
CCNL1-217ENST00000476367 SPINK5Q9NQ38 1064 aaPredicted RBP18.86■□□□□ 0.61
CCNL1-217ENST00000476367 QSER1Q2KHR3 1735 aa18.86■□□□□ 0.61
CCNL1-217ENST00000476367 UBR3Q6ZT12 1888 aa18.86■□□□□ 0.61
CCNL1-217ENST00000476367 ZNF790Q6PG37 636 aa18.85■□□□□ 0.61
CCNL1-217ENST00000476367 LINC00116Q8NCU8 138 aa18.85■□□□□ 0.61
CCNL1-217ENST00000476367 KCNQ3O43525 872 aa18.85■□□□□ 0.61
CCNL1-217ENST00000476367 TAF7Q15545 349 aaPredicted RBP18.85■□□□□ 0.61
CCNL1-217ENST00000476367 SLC15A2Q16348 729 aa18.85■□□□□ 0.61
CCNL1-217ENST00000476367 MIS18AQ9NYP9 233 aa18.85■□□□□ 0.61
CCNL1-217ENST00000476367 CASZ1Q86V15 1759 aa18.84■□□□□ 0.61
CCNL1-217ENST00000476367 ZNF853P0CG23 659 aa18.84■□□□□ 0.61
CCNL1-217ENST00000476367 MYH14Q7Z406 1995 aaKnown RBP18.84■□□□□ 0.61
CCNL1-217ENST00000476367 AKT1S1Q96B36 256 aa18.83■□□□□ 0.61
CCNL1-217ENST00000476367 ZNF496Q96IT1 587 aaPredicted RBP18.83■□□□□ 0.61
CCNL1-217ENST00000476367 HNRNPUQ00839 825 aaKnown RBP eCLIP18.82■□□□□ 0.6
CCNL1-217ENST00000476367 NGEFQ8N5V2 710 aa18.82■□□□□ 0.6
CCNL1-217ENST00000476367 AK7Q96M32 723 aa18.82■□□□□ 0.6
CCNL1-217ENST00000476367 TFCP2L1Q9NZI6 479 aa18.82■□□□□ 0.6
CCNL1-217ENST00000476367 LAMB4A4D0S4 1761 aa18.81■□□□□ 0.6
CCNL1-217ENST00000476367 CHL1O00533 1208 aa18.81■□□□□ 0.6
CCNL1-217ENST00000476367 DNAJC10Q8IXB1 793 aa18.81■□□□□ 0.6
CCNL1-217ENST00000476367 FMNL2Q96PY5 1086 aa18.81■□□□□ 0.6
CCNL1-217ENST00000476367 HEG1Q9ULI3 1381 aa18.81■□□□□ 0.6
CCNL1-217ENST00000476367 TSPYL4Q9UJ04 414 aa18.8■□□□□ 0.6
CCNL1-217ENST00000476367 LAS1LQ9Y4W2 734 aaKnown RBP18.8■□□□□ 0.6
CCNL1-217ENST00000476367 WDR63Q8IWG1 891 aa18.79■□□□□ 0.6
CCNL1-217ENST00000476367 CFAP44Q96MT7 982 aa18.79■□□□□ 0.6
CCNL1-217ENST00000476367 PDGFDQ9GZP0 370 aaPredicted RBP18.79■□□□□ 0.6
CCNL1-217ENST00000476367 GNPATO15228 680 aa18.78■□□□□ 0.6
CCNL1-217ENST00000476367 CDCA7LQ96GN5 454 aa18.78■□□□□ 0.6
CCNL1-217ENST00000476367 PNPLA7Q6ZV29 1317 aa18.78■□□□□ 0.6
CCNL1-217ENST00000476367 PHF14O94880 888 aa18.78■□□□□ 0.6
CCNL1-217ENST00000476367 HMGB2P26583 209 aaKnown RBP18.78■□□□□ 0.6
CCNL1-217ENST00000476367 MBIPQ9NS73 344 aa18.78■□□□□ 0.6
CCNL1-217ENST00000476367 C4AP0C0L4 1744 aa18.77■□□□□ 0.6
CCNL1-217ENST00000476367 IL16Q14005 1332 aa18.77■□□□□ 0.6
CCNL1-217ENST00000476367 CNTNAP4Q9C0A0 1308 aa18.77■□□□□ 0.6
CCNL1-217ENST00000476367 CRKLP46109 303 aaKnown RBP18.77■□□□□ 0.6
CCNL1-217ENST00000476367 SMIM5Q71RC9 77 aa18.77■□□□□ 0.6
CCNL1-217ENST00000476367 AMIGO3Q86WK7 504 aa18.77■□□□□ 0.6
CCNL1-217ENST00000476367 VSIG10Q8N0Z9 540 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms