RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 NEFLP07196 543 aa26.37■■□□□ 1.81
CDHR3-210ENST00000474330 EXOSC9Q06265 439 aaKnown RBP26.37■■□□□ 1.81
CDHR3-210ENST00000474330 ADAMTS7Q9UKP4 1686 aa26.35■■□□□ 1.81
CDHR3-210ENST00000474330 BAG6P46379 1132 aa26.34■■□□□ 1.81
CDHR3-210ENST00000474330 EN1Q05925 392 aaPredicted RBP26.34■■□□□ 1.81
CDHR3-210ENST00000474330 SRCAPQ6ZRS2 3230 aa26.34■■□□□ 1.81
CDHR3-210ENST00000474330 IFNL2Q8IZJ0 200 aa26.33■■□□□ 1.81
CDHR3-210ENST00000474330 LGR6Q9HBX8 967 aa26.33■■□□□ 1.81
CDHR3-210ENST00000474330 TNS2Q63HR2 1409 aa26.33■■□□□ 1.8
CDHR3-210ENST00000474330 RNMTO43148 476 aaKnown RBP26.32■■□□□ 1.8
CDHR3-210ENST00000474330 PHKG2P15735 406 aa26.32■■□□□ 1.8
CDHR3-210ENST00000474330 ZCRB1Q8TBF4 217 aaKnown RBP26.32■■□□□ 1.8
CDHR3-210ENST00000474330 BABAM1Q9NWV8 329 aa26.32■■□□□ 1.8
CDHR3-210ENST00000474330 RRP1P56182 461 aaKnown RBP26.32■■□□□ 1.8
CDHR3-210ENST00000474330 MPRIPQ6WCQ1 1025 aa26.32■■□□□ 1.8
CDHR3-210ENST00000474330 PCDH11XQ9BZA7 1347 aa26.31■■□□□ 1.8
CDHR3-210ENST00000474330 PCDH11YQ9BZA8 1340 aa26.31■■□□□ 1.8
CDHR3-210ENST00000474330 BCL9O00512 1426 aa26.31■■□□□ 1.8
CDHR3-210ENST00000474330 TAF7Q15545 349 aaPredicted RBP26.31■■□□□ 1.8
CDHR3-210ENST00000474330 PTF1AQ7RTS3 328 aa26.31■■□□□ 1.8
CDHR3-210ENST00000474330 SCN11AQ9UI33 1791 aa26.3■■□□□ 1.8
CDHR3-210ENST00000474330 APBA3O96018 575 aa26.3■■□□□ 1.8
CDHR3-210ENST00000474330 CYP27B1O15528 508 aa26.29■■□□□ 1.8
CDHR3-210ENST00000474330 RARSP54136 660 aaKnown RBP26.29■■□□□ 1.8
CDHR3-210ENST00000474330 FKBP8Q14318 412 aa26.29■■□□□ 1.8
CDHR3-210ENST00000474330 CAMKK2Q96RR4 588 aa26.29■■□□□ 1.8
CDHR3-210ENST00000474330 TSPYL4Q9UJ04 414 aa26.28■■□□□ 1.8
CDHR3-210ENST00000474330 HSP90AB1P08238 724 aaKnown RBP26.28■■□□□ 1.8
CDHR3-210ENST00000474330 EZH2Q15910 746 aaKnown RBP26.28■■□□□ 1.8
CDHR3-210ENST00000474330 ZNF428Q96B54 188 aa26.27■■□□□ 1.8
CDHR3-210ENST00000474330 TEFQ10587 303 aa26.26■■□□□ 1.79
CDHR3-210ENST00000474330 MIS18AQ9NYP9 233 aa26.26■■□□□ 1.79
CDHR3-210ENST00000474330 SIPA1L3O60292 1781 aaPredicted RBP26.26■■□□□ 1.79
CDHR3-210ENST00000474330 KDM6AO15550 1401 aaPredicted RBP26.26■■□□□ 1.79
CDHR3-210ENST00000474330 BCAR3O75815 825 aa26.25■■□□□ 1.79
CDHR3-210ENST00000474330 DCAF5Q96JK2 942 aa26.25■■□□□ 1.79
CDHR3-210ENST00000474330 VAMP4O75379 141 aa26.25■■□□□ 1.79
CDHR3-210ENST00000474330 C8orf58Q8NAV2 365 aa26.25■■□□□ 1.79
CDHR3-210ENST00000474330 TSPYL6Q8N831 410 aa26.24■■□□□ 1.79
CDHR3-210ENST00000474330 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.24■■□□□ 1.79
CDHR3-210ENST00000474330 BCL11BQ9C0K0 894 aaPredicted RBP26.24■■□□□ 1.79
CDHR3-210ENST00000474330 IRX6P78412 446 aaPredicted RBP26.23■■□□□ 1.79
CDHR3-210ENST00000474330 TWISTNBQ3B726 338 aaPredicted RBP26.23■■□□□ 1.79
CDHR3-210ENST00000474330 KDM3BQ7LBC6 1761 aa26.22■■□□□ 1.79
CDHR3-210ENST00000474330 NKX1-1Q15270 411 aaPredicted RBP26.22■■□□□ 1.79
CDHR3-210ENST00000474330 DDX54Q8TDD1 881 aaKnown RBP26.22■■□□□ 1.79
CDHR3-210ENST00000474330 RREB1Q92766 1687 aa26.21■■□□□ 1.79
CDHR3-210ENST00000474330 KCNQ2O43526 872 aa26.21■■□□□ 1.79
CDHR3-210ENST00000474330 ALDH1L2Q3SY69 923 aa26.21■■□□□ 1.79
CDHR3-210ENST00000474330 ERICH6BQ5W0A0 696 aa26.21■■□□□ 1.79
CDHR3-210ENST00000474330 PLIN1O60240 522 aa26.2■■□□□ 1.78
CDHR3-210ENST00000474330 KAT6BQ8WYB5 2073 aa26.19■■□□□ 1.78
CDHR3-210ENST00000474330 MRC1P22897 1456 aa26.19■■□□□ 1.78
CDHR3-210ENST00000474330 ELL2O00472 640 aaPredicted RBP26.19■■□□□ 1.78
CDHR3-210ENST00000474330 SLC52A2Q9HAB3 445 aa26.19■■□□□ 1.78
CDHR3-210ENST00000474330 BTBD11A6QL63 1104 aa26.18■■□□□ 1.78
CDHR3-210ENST00000474330 SSH1Q8WYL5 1049 aa26.18■■□□□ 1.78
CDHR3-210ENST00000474330 NHSQ6T4R5 1651 aa26.18■■□□□ 1.78
CDHR3-210ENST00000474330 PLSCR1O15162 318 aa26.17■■□□□ 1.78
CDHR3-210ENST00000474330 KRT24Q2M2I5 525 aa26.17■■□□□ 1.78
CDHR3-210ENST00000474330 TOGARAM1Q9Y4F4 1720 aa26.17■■□□□ 1.78
CDHR3-210ENST00000474330 RGPD3A6NKT7 1758 aaPredicted RBP26.17■■□□□ 1.78
CDHR3-210ENST00000474330 RGPD4Q7Z3J3 1758 aa26.17■■□□□ 1.78
CDHR3-210ENST00000474330 ACSBG1Q96GR2 724 aa26.17■■□□□ 1.78
CDHR3-210ENST00000474330 BCL2L13Q9BXK5 485 aa26.17■■□□□ 1.78
CDHR3-210ENST00000474330 NUP188Q5SRE5 1749 aa26.16■■□□□ 1.78
CDHR3-210ENST00000474330 SMC4Q9NTJ3 1288 aa26.16■■□□□ 1.78
CDHR3-210ENST00000474330 SOS1Q07889 1333 aaPredicted RBP26.15■■□□□ 1.78
CDHR3-210ENST00000474330 BRPF1P55201 1214 aaPredicted RBP26.15■■□□□ 1.78
CDHR3-210ENST00000474330 PROM2Q8N271 834 aa26.14■■□□□ 1.78
CDHR3-210ENST00000474330 DOT1LQ8TEK3 1739 aa26.14■■□□□ 1.78
CDHR3-210ENST00000474330 ITGB4P16144 1822 aa26.14■■□□□ 1.78
CDHR3-210ENST00000474330 ERVV-2B6SEH9 535 aa26.14■■□□□ 1.77
CDHR3-210ENST00000474330 NFATC2IPQ8NCF5 419 aa26.14■■□□□ 1.77
CDHR3-210ENST00000474330 EIF4A1P60842 406 aaKnown RBP26.13■■□□□ 1.77
CDHR3-210ENST00000474330 CABP4P57796 275 aa26.12■■□□□ 1.77
CDHR3-210ENST00000474330 BTAF1O14981 1849 aa26.12■■□□□ 1.77
CDHR3-210ENST00000474330 PSDA5PKW4 1024 aaPredicted RBP26.1■■□□□ 1.77
CDHR3-210ENST00000474330 KCNQ3O43525 872 aa26.1■■□□□ 1.77
CDHR3-210ENST00000474330 FRAT1Q92837 279 aaPredicted RBP26.1■■□□□ 1.77
CDHR3-210ENST00000474330 KIF16BQ96L93 1317 aa26.1■■□□□ 1.77
CDHR3-210ENST00000474330 CANXP27824 592 aaKnown RBP26.1■■□□□ 1.77
CDHR3-210ENST00000474330 PDE3AQ14432 1141 aa26.1■■□□□ 1.77
CDHR3-210ENST00000474330 MRPL50Q8N5N7 158 aaKnown RBP26.1■■□□□ 1.77
CDHR3-210ENST00000474330 C20orf194Q5TEA3 1177 aa26.09■■□□□ 1.77
CDHR3-210ENST00000474330 ZKSCAN2Q63HK3 967 aa26.08■■□□□ 1.77
CDHR3-210ENST00000474330 HEG1Q9ULI3 1381 aa26.08■■□□□ 1.76
CDHR3-210ENST00000474330 HOXB7P09629 217 aa26.07■■□□□ 1.76
CDHR3-210ENST00000474330 ZNF790Q6PG37 636 aa26.07■■□□□ 1.76
CDHR3-210ENST00000474330 R3HDM1Q15032 1099 aaKnown RBP26.06■■□□□ 1.76
CDHR3-210ENST00000474330 IPO8O15397 1037 aaKnown RBP26.06■■□□□ 1.76
CDHR3-210ENST00000474330 PRIM1P49642 420 aaKnown RBP26.06■■□□□ 1.76
CDHR3-210ENST00000474330 NOB1Q9ULX3 412 aaKnown RBP26.06■■□□□ 1.76
CDHR3-210ENST00000474330 CACNA1FO60840 1977 aa26.05■■□□□ 1.76
CDHR3-210ENST00000474330 SLC39A6Q13433 755 aa26.04■■□□□ 1.76
CDHR3-210ENST00000474330 CHMP4AQ9BY43 222 aa26.04■■□□□ 1.76
CDHR3-210ENST00000474330 PAPPAQ13219 1627 aa26.03■■□□□ 1.76
CDHR3-210ENST00000474330 TCERG1O14776 1098 aaKnown RBP26.03■■□□□ 1.76
CDHR3-210ENST00000474330 MS4A1P11836 297 aa26.03■■□□□ 1.76
CDHR3-210ENST00000474330 CCDC30Q5VVM6 783 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms