RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 TEFQ10587 303 aa19.96■□□□□ 0.79
SNX13-205ENST00000471744 CCDC184Q52MB2 194 aa19.96■□□□□ 0.79
SNX13-205ENST00000471744 NBPF14Q5TI25 921 aa19.96■□□□□ 0.79
SNX13-205ENST00000471744 DIEXFQ68CQ4 756 aaKnown RBP19.96■□□□□ 0.79
SNX13-205ENST00000471744 PROM2Q8N271 834 aa19.96■□□□□ 0.79
SNX13-205ENST00000471744 NFATC2IPQ8NCF5 419 aa19.96■□□□□ 0.79
SNX13-205ENST00000471744 CEMIPQ8WUJ3 1361 aa19.95■□□□□ 0.79
SNX13-205ENST00000471744 SIPA1L3O60292 1781 aaPredicted RBP19.95■□□□□ 0.78
SNX13-205ENST00000471744 IL17REQ8NFR9 667 aa19.94■□□□□ 0.78
SNX13-205ENST00000471744 PNISRQ8TF01 805 aaKnown RBP19.94■□□□□ 0.78
SNX13-205ENST00000471744 LMOD3Q0VAK6 560 aa19.93■□□□□ 0.78
SNX13-205ENST00000471744 ATG3Q9NT62 314 aa19.93■□□□□ 0.78
SNX13-205ENST00000471744 CCNL1Q9UK58 526 aaPredicted RBP19.93■□□□□ 0.78
SNX13-205ENST00000471744 ASAP1Q9ULH1 1129 aa19.93■□□□□ 0.78
SNX13-205ENST00000471744 ZNF831Q5JPB2 1677 aa19.93■□□□□ 0.78
SNX13-205ENST00000471744 TMPOP42166 694 aaKnown RBP19.92■□□□□ 0.78
SNX13-205ENST00000471744 PPP4R3CPQ6ZMV5 832 aa19.92■□□□□ 0.78
SNX13-205ENST00000471744 CCDC146Q8IYE0 955 aa19.92■□□□□ 0.78
SNX13-205ENST00000471744 TAF1LQ8IZX4 1826 aa19.92■□□□□ 0.78
SNX13-205ENST00000471744 PAPPAQ13219 1627 aa19.91■□□□□ 0.78
SNX13-205ENST00000471744 LOC102724428A0A0B4J2F2 783 aa19.9■□□□□ 0.78
SNX13-205ENST00000471744 CCER2I3L3R5 266 aa19.9■□□□□ 0.78
SNX13-205ENST00000471744 SIK1P57059 783 aa19.9■□□□□ 0.78
SNX13-205ENST00000471744 RIPK4P57078 832 aa19.9■□□□□ 0.78
SNX13-205ENST00000471744 C5P01031 1676 aa19.9■□□□□ 0.78
SNX13-205ENST00000471744 MCM10Q7L590 875 aa19.89■□□□□ 0.77
SNX13-205ENST00000471744 LRRC4BQ9NT99 713 aa19.89■□□□□ 0.77
SNX13-205ENST00000471744 STK32BQ9NY57 414 aa19.89■□□□□ 0.77
SNX13-205ENST00000471744 UBR2Q8IWV8 1755 aa19.88■□□□□ 0.77
SNX13-205ENST00000471744 TTC5Q8N0Z6 440 aa19.87■□□□□ 0.77
SNX13-205ENST00000471744 CICQ96RK0 1608 aaPredicted RBP19.87■□□□□ 0.77
SNX13-205ENST00000471744 ATP6V1AP38606 617 aa19.86■□□□□ 0.77
SNX13-205ENST00000471744 DCTN1Q14203 1278 aa19.86■□□□□ 0.77
SNX13-205ENST00000471744 RBM42Q9BTD8 480 aaKnown RBP19.86■□□□□ 0.77
SNX13-205ENST00000471744 QSER1Q2KHR3 1735 aa19.85■□□□□ 0.77
SNX13-205ENST00000471744 BTBD11A6QL63 1104 aa19.85■□□□□ 0.77
SNX13-205ENST00000471744 TAF7Q15545 349 aaPredicted RBP19.85■□□□□ 0.77
SNX13-205ENST00000471744 SLC15A2Q16348 729 aa19.85■□□□□ 0.77
SNX13-205ENST00000471744 APAF1O14727 1248 aa19.84■□□□□ 0.77
SNX13-205ENST00000471744 MAPK8IP2Q13387 824 aaPredicted RBP19.84■□□□□ 0.77
SNX13-205ENST00000471744 NEUROD2Q15784 382 aa19.84■□□□□ 0.77
SNX13-205ENST00000471744 ZNF790Q6PG37 636 aa19.84■□□□□ 0.77
SNX13-205ENST00000471744 ANO8Q9HCE9 1232 aaPredicted RBP19.84■□□□□ 0.77
SNX13-205ENST00000471744 RRP7AQ9Y3A4 280 aaKnown RBP19.84■□□□□ 0.77
SNX13-205ENST00000471744 KCPQ6ZWJ8 1503 aa19.83■□□□□ 0.77
SNX13-205ENST00000471744 C4BP0C0L5 1744 aa19.83■□□□□ 0.77
SNX13-205ENST00000471744 PTCD1O75127 700 aaKnown RBP19.83■□□□□ 0.77
SNX13-205ENST00000471744 KCNQ4P56696 695 aa19.83■□□□□ 0.77
SNX13-205ENST00000471744 SLC39A6Q13433 755 aa19.83■□□□□ 0.77
SNX13-205ENST00000471744 R3HDM1Q15032 1099 aaKnown RBP19.83■□□□□ 0.77
SNX13-205ENST00000471744 FAM9BQ8IZU0 186 aa19.83■□□□□ 0.77
SNX13-205ENST00000471744 VSIG10Q8N0Z9 540 aa19.83■□□□□ 0.77
SNX13-205ENST00000471744 COL5A3P25940 1745 aaPredicted RBP19.82■□□□□ 0.76
SNX13-205ENST00000471744 NCBP3Q53F19 620 aaKnown RBP19.82■□□□□ 0.76
SNX13-205ENST00000471744 AKT1S1Q96B36 256 aa19.82■□□□□ 0.76
SNX13-205ENST00000471744 KDM3BQ7LBC6 1761 aa19.81■□□□□ 0.76
SNX13-205ENST00000471744 BABAM1Q9NWV8 329 aa19.81■□□□□ 0.76
SNX13-205ENST00000471744 TJP1Q07157 1748 aa19.81■□□□□ 0.76
SNX13-205ENST00000471744 PSDA5PKW4 1024 aaPredicted RBP19.8■□□□□ 0.76
SNX13-205ENST00000471744 CALD1Q05682 793 aaKnown RBP19.8■□□□□ 0.76
SNX13-205ENST00000471744 ITPK1Q13572 414 aa19.8■□□□□ 0.76
SNX13-205ENST00000471744 FMNL2Q96PY5 1086 aa19.8■□□□□ 0.76
SNX13-205ENST00000471744 SLC4A9Q96Q91 983 aa19.8■□□□□ 0.76
SNX13-205ENST00000471744 TRIM35Q9UPQ4 493 aa19.8■□□□□ 0.76
SNX13-205ENST00000471744 TUBGCP6Q96RT7 1819 aa19.8■□□□□ 0.76
SNX13-205ENST00000471744 ZNF827Q17R98 1081 aa19.79■□□□□ 0.76
SNX13-205ENST00000471744 NGEFQ8N5V2 710 aa19.79■□□□□ 0.76
SNX13-205ENST00000471744 AK7Q96M32 723 aa19.79■□□□□ 0.76
SNX13-205ENST00000471744 THUMPD2Q9BTF0 503 aaKnown RBP19.79■□□□□ 0.76
SNX13-205ENST00000471744 TEX13AQ9BXU3 409 aaPredicted RBP19.79■□□□□ 0.76
SNX13-205ENST00000471744 TFCP2L1Q9NZI6 479 aa19.79■□□□□ 0.76
SNX13-205ENST00000471744 UBR3Q6ZT12 1888 aa19.79■□□□□ 0.76
SNX13-205ENST00000471744 CCDC27Q2M243 656 aa19.78■□□□□ 0.76
SNX13-205ENST00000471744 RC3H1Q5TC82 1133 aaKnown RBP19.78■□□□□ 0.76
SNX13-205ENST00000471744 LINC00116Q8NCU8 138 aa19.78■□□□□ 0.76
SNX13-205ENST00000471744 FLAD1Q8NFF5 587 aa19.78■□□□□ 0.76
SNX13-205ENST00000471744 HEG1Q9ULI3 1381 aa19.78■□□□□ 0.76
SNX13-205ENST00000471744 CNTNAP4Q9C0A0 1308 aa19.77■□□□□ 0.76
SNX13-205ENST00000471744 MYH14Q7Z406 1995 aaKnown RBP19.77■□□□□ 0.76
SNX13-205ENST00000471744 MIER1Q8N108 512 aa19.77■□□□□ 0.76
SNX13-205ENST00000471744 ZNF496Q96IT1 587 aaPredicted RBP19.77■□□□□ 0.76
SNX13-205ENST00000471744 CASZ1Q86V15 1759 aa19.77■□□□□ 0.76
SNX13-205ENST00000471744 TSPYL4Q9UJ04 414 aa19.75■□□□□ 0.75
SNX13-205ENST00000471744 KCNQ3O43525 872 aa19.74■□□□□ 0.75
SNX13-205ENST00000471744 STARD3NLO95772 234 aa19.74■□□□□ 0.75
SNX13-205ENST00000471744 DNAJC10Q8IXB1 793 aa19.74■□□□□ 0.75
SNX13-205ENST00000471744 GNPATO15228 680 aa19.73■□□□□ 0.75
SNX13-205ENST00000471744 SNRPA1P09661 255 aaKnown RBP19.73■□□□□ 0.75
SNX13-205ENST00000471744 SSFA2P28290 1259 aa19.73■□□□□ 0.75
SNX13-205ENST00000471744 CRKLP46109 303 aaKnown RBP19.73■□□□□ 0.75
SNX13-205ENST00000471744 MIS18AQ9NYP9 233 aa19.73■□□□□ 0.75
SNX13-205ENST00000471744 PNPLA7Q6ZV29 1317 aa19.73■□□□□ 0.75
SNX13-205ENST00000471744 CHL1O00533 1208 aa19.72■□□□□ 0.75
SNX13-205ENST00000471744 CYP19A1P11511 503 aaPredicted RBP19.72■□□□□ 0.75
SNX13-205ENST00000471744 SLC16A10Q8TF71 515 aa19.72■□□□□ 0.75
SNX13-205ENST00000471744 CFAP44Q96MT7 982 aa19.72■□□□□ 0.75
SNX13-205ENST00000471744 RTCBQ9Y3I0 505 aaKnown RBP19.72■□□□□ 0.75
SNX13-205ENST00000471744 SRCAPQ6ZRS2 3230 aa19.71■□□□□ 0.75
SNX13-205ENST00000471744 LAMB4A4D0S4 1761 aa19.71■□□□□ 0.75
SNX13-205ENST00000471744 RPS6KA4O75676 772 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms