RNA–Protein interactions for RNA: ENST00000471294.1

HDLBP-234, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-234ENST00000471294 TOGARAM1Q9Y4F4 1720 aa15.67■□□□□ 0.1
HDLBP-234ENST00000471294 CABP4P57796 275 aa15.66■□□□□ 0.1
HDLBP-234ENST00000471294 FAM196AQ6ZSG2 479 aa15.66■□□□□ 0.1
HDLBP-234ENST00000471294 ZNF428Q96B54 188 aa15.66■□□□□ 0.1
HDLBP-234ENST00000471294 RGS12O14924 1447 aa15.66■□□□□ 0.1
HDLBP-234ENST00000471294 FANCIQ9NVI1 1328 aa15.66■□□□□ 0.1
HDLBP-234ENST00000471294 KDM3BQ7LBC6 1761 aa15.65■□□□□ 0.1
HDLBP-234ENST00000471294 BTBD11A6QL63 1104 aa15.65■□□□□ 0.1
HDLBP-234ENST00000471294 CDCA7LQ96GN5 454 aa15.65■□□□□ 0.1
HDLBP-234ENST00000471294 CHMP4AQ9BY43 222 aa15.65■□□□□ 0.1
HDLBP-234ENST00000471294 SPINK5Q9NQ38 1064 aaPredicted RBP15.65■□□□□ 0.1
HDLBP-234ENST00000471294 MBIPQ9NS73 344 aa15.65■□□□□ 0.1
HDLBP-234ENST00000471294 TMOD3Q9NYL9 352 aa15.65■□□□□ 0.1
HDLBP-234ENST00000471294 ITGB4P16144 1822 aa15.65■□□□□ 0.1
HDLBP-234ENST00000471294 BRWD3Q6RI45 1802 aa15.65■□□□□ 0.1
HDLBP-234ENST00000471294 CENPBP07199 599 aaPredicted RBP15.64■□□□□ 0.09
HDLBP-234ENST00000471294 NFATC2IPQ8NCF5 419 aa15.64■□□□□ 0.09
HDLBP-234ENST00000471294 TSPYL4Q9UJ04 414 aa15.64■□□□□ 0.09
HDLBP-234ENST00000471294 DOT1LQ8TEK3 1739 aa15.63■□□□□ 0.09
HDLBP-234ENST00000471294 SENP3-EIF4A1A0A087X0R7 540 aa15.63■□□□□ 0.09
HDLBP-234ENST00000471294 HOXB7P09629 217 aa15.63■□□□□ 0.09
HDLBP-234ENST00000471294 PAPPAQ13219 1627 aa15.63■□□□□ 0.09
HDLBP-234ENST00000471294 NHSQ6T4R5 1651 aa15.63■□□□□ 0.09
HDLBP-234ENST00000471294 HEG1Q9ULI3 1381 aa15.62■□□□□ 0.09
HDLBP-234ENST00000471294 ZNF790Q6PG37 636 aa15.62■□□□□ 0.09
HDLBP-234ENST00000471294 SBF2Q86WG5 1849 aa15.61■□□□□ 0.09
HDLBP-234ENST00000471294 PIGBQ92521 554 aa15.61■□□□□ 0.09
HDLBP-234ENST00000471294 UBR2Q8IWV8 1755 aa15.6■□□□□ 0.09
HDLBP-234ENST00000471294 PRIM1P49642 420 aaKnown RBP15.6■□□□□ 0.09
HDLBP-234ENST00000471294 EIF4A1P60842 406 aaKnown RBP15.6■□□□□ 0.09
HDLBP-234ENST00000471294 TTC5Q8N0Z6 440 aa15.6■□□□□ 0.09
HDLBP-234ENST00000471294 VSIG10Q8N0Z9 540 aa15.6■□□□□ 0.09
HDLBP-234ENST00000471294 SMARCC1Q92922 1105 aaPredicted RBP15.6■□□□□ 0.09
HDLBP-234ENST00000471294 LAS1LQ9Y4W2 734 aaKnown RBP15.6■□□□□ 0.09
HDLBP-234ENST00000471294 HMGB2P26583 209 aaKnown RBP15.59■□□□□ 0.09
HDLBP-234ENST00000471294 TSR2Q969E8 191 aaKnown RBP15.59■□□□□ 0.09
HDLBP-234ENST00000471294 BCL11BQ9C0K0 894 aaPredicted RBP15.59■□□□□ 0.09
HDLBP-234ENST00000471294 ZNF831Q5JPB2 1677 aa15.59■□□□□ 0.09
HDLBP-234ENST00000471294 KAT6BQ8WYB5 2073 aa15.58■□□□□ 0.09
HDLBP-234ENST00000471294 FMNL2Q96PY5 1086 aa15.58■□□□□ 0.08
HDLBP-234ENST00000471294 CICQ96RK0 1608 aaPredicted RBP15.57■□□□□ 0.08
HDLBP-234ENST00000471294 EXOSC9Q06265 439 aaKnown RBP15.57■□□□□ 0.08
HDLBP-234ENST00000471294 KCPQ6ZWJ8 1503 aa15.57■□□□□ 0.08
HDLBP-234ENST00000471294 BRPF1P55201 1214 aaPredicted RBP15.56■□□□□ 0.08
HDLBP-234ENST00000471294 TWISTNBQ3B726 338 aaPredicted RBP15.56■□□□□ 0.08
HDLBP-234ENST00000471294 ALDH1L2Q3SY69 923 aa15.56■□□□□ 0.08
HDLBP-234ENST00000471294 TEX13AQ9BXU3 409 aaPredicted RBP15.56■□□□□ 0.08
HDLBP-234ENST00000471294 ATG3Q9NT62 314 aa15.56■□□□□ 0.08
HDLBP-234ENST00000471294 MIS18AQ9NYP9 233 aa15.56■□□□□ 0.08
HDLBP-234ENST00000471294 CACNA1FO60840 1977 aa15.55■□□□□ 0.08
HDLBP-234ENST00000471294 VAMP4O75379 141 aa15.55■□□□□ 0.08
HDLBP-234ENST00000471294 GIGYF1O75420 1035 aaPredicted RBP15.55■□□□□ 0.08
HDLBP-234ENST00000471294 SYTL4Q96C24 671 aaPredicted RBP15.55■□□□□ 0.08
HDLBP-234ENST00000471294 KCNQ2O43526 872 aa15.54■□□□□ 0.08
HDLBP-234ENST00000471294 SNRPA1P09661 255 aaKnown RBP15.54■□□□□ 0.08
HDLBP-234ENST00000471294 SLC39A6Q13433 755 aa15.54■□□□□ 0.08
HDLBP-234ENST00000471294 C8orf58Q8NAV2 365 aa15.54■□□□□ 0.08
HDLBP-234ENST00000471294 ACSBG1Q96GR2 724 aa15.54■□□□□ 0.08
HDLBP-234ENST00000471294 ZNF496Q96IT1 587 aaPredicted RBP15.54■□□□□ 0.08
HDLBP-234ENST00000471294 BTAF1O14981 1849 aa15.54■□□□□ 0.08
HDLBP-234ENST00000471294 ERBB4Q15303 1308 aa15.53■□□□□ 0.08
HDLBP-234ENST00000471294 KCNQ3O43525 872 aa15.53■□□□□ 0.08
HDLBP-234ENST00000471294 ASAP1Q9ULH1 1129 aa15.53■□□□□ 0.08
HDLBP-234ENST00000471294 PALLDQ8WX93 1383 aa15.52■□□□□ 0.08
HDLBP-234ENST00000471294 RCAN3Q9UKA8 241 aa15.52■□□□□ 0.08
HDLBP-234ENST00000471294 RGPD3A6NKT7 1758 aaPredicted RBP15.52■□□□□ 0.07
HDLBP-234ENST00000471294 RGPD4Q7Z3J3 1758 aa15.52■□□□□ 0.07
HDLBP-234ENST00000471294 PLSCR1O15162 318 aa15.51■□□□□ 0.07
HDLBP-234ENST00000471294 CCDC30Q5VVM6 783 aa15.51■□□□□ 0.07
HDLBP-234ENST00000471294 TSPYL6Q8N831 410 aa15.51■□□□□ 0.07
HDLBP-234ENST00000471294 LAMB4A4D0S4 1761 aa15.51■□□□□ 0.07
HDLBP-234ENST00000471294 LY75O60449 1722 aa15.51■□□□□ 0.07
HDLBP-234ENST00000471294 RARSP54136 660 aaKnown RBP15.5■□□□□ 0.07
HDLBP-234ENST00000471294 FAM182BQ5T319 152 aa15.5■□□□□ 0.07
HDLBP-234ENST00000471294 CCDC125Q86Z20 511 aa15.5■□□□□ 0.07
HDLBP-234ENST00000471294 LOC102724428A0A0B4J2F2 783 aa15.49■□□□□ 0.07
HDLBP-234ENST00000471294 SIK1P57059 783 aa15.49■□□□□ 0.07
HDLBP-234ENST00000471294 SLC27A3Q5K4L6 730 aa15.49■□□□□ 0.07
HDLBP-234ENST00000471294 TRIM37O94972 964 aa15.48■□□□□ 0.07
HDLBP-234ENST00000471294 STARD3NLO95772 234 aa15.48■□□□□ 0.07
HDLBP-234ENST00000471294 KRT24Q2M2I5 525 aa15.48■□□□□ 0.07
HDLBP-234ENST00000471294 HDGFL1Q5TGJ6 251 aa15.48■□□□□ 0.07
HDLBP-234ENST00000471294 RNF123Q5XPI4 1314 aa15.47■□□□□ 0.07
HDLBP-234ENST00000471294 EP400Q96L91 3159 aa15.47■□□□□ 0.07
HDLBP-234ENST00000471294 PTCD1O75127 700 aaKnown RBP15.47■□□□□ 0.07
HDLBP-234ENST00000471294 STK31Q9BXU1 1019 aa15.47■□□□□ 0.07
HDLBP-234ENST00000471294 TNS1Q9HBL0 1735 aaKnown RBP15.47■□□□□ 0.07
HDLBP-234ENST00000471294 DBF4Q9UBU7 674 aaPredicted RBP15.47■□□□□ 0.07
HDLBP-234ENST00000471294 C5P01031 1676 aa15.47■□□□□ 0.07
HDLBP-234ENST00000471294 KIF16BQ96L93 1317 aa15.46■□□□□ 0.07
HDLBP-234ENST00000471294 ELL2O00472 640 aaPredicted RBP15.46■□□□□ 0.07
HDLBP-234ENST00000471294 SSH1Q8WYL5 1049 aa15.46■□□□□ 0.07
HDLBP-234ENST00000471294 ARHGAP45Q92619 1136 aa15.46■□□□□ 0.07
HDLBP-234ENST00000471294 SLC4A9Q96Q91 983 aa15.46■□□□□ 0.07
HDLBP-234ENST00000471294 RBM42Q9BTD8 480 aaKnown RBP15.46■□□□□ 0.07
HDLBP-234ENST00000471294 TJP1Q07157 1748 aa15.46■□□□□ 0.06
HDLBP-234ENST00000471294 RC3H1Q5TC82 1133 aaKnown RBP15.45■□□□□ 0.06
HDLBP-234ENST00000471294 PTF1AQ7RTS3 328 aa15.45■□□□□ 0.06
HDLBP-234ENST00000471294 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.45■□□□□ 0.06
HDLBP-234ENST00000471294 DDX21Q9NR30 783 aaKnown RBP eCLIP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms