RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 LAPTM4BQ86VI4 370 aa9.09□□□□□ -0.95
VAMP3-202ENST00000470357 PRAM1Q96QH2 718 aa9.09□□□□□ -0.95
VAMP3-202ENST00000470357 POLR3GLQ9BT43 218 aa9.09□□□□□ -0.95
VAMP3-202ENST00000470357 COL22A1Q8NFW1 1626 aaPredicted RBP9.09□□□□□ -0.95
VAMP3-202ENST00000470357 ADGRB2O60241 1585 aa9.08□□□□□ -0.96
VAMP3-202ENST00000470357 MYOM1P52179 1685 aa9.08□□□□□ -0.96
VAMP3-202ENST00000470357 NBPF26B4DH59 902 aa9.08□□□□□ -0.96
VAMP3-202ENST00000470357 WNT2BQ93097 391 aa9.08□□□□□ -0.96
VAMP3-202ENST00000470357 GJD4Q96KN9 370 aaPredicted RBP9.08□□□□□ -0.96
VAMP3-202ENST00000470357 ZFRQ96KR1 1074 aaKnown RBP9.08□□□□□ -0.96
VAMP3-202ENST00000470357 ROBO2Q9HCK4 1378 aa9.08□□□□□ -0.96
VAMP3-202ENST00000470357 ANP32CO43423 234 aa9.07□□□□□ -0.96
VAMP3-202ENST00000470357 FAM98CQ17RN3 349 aaKnown RBP9.07□□□□□ -0.96
VAMP3-202ENST00000470357 DEFB132Q7Z7B7 95 aa9.07□□□□□ -0.96
VAMP3-202ENST00000470357 TULP4Q9NRJ4 1543 aa9.06□□□□□ -0.96
VAMP3-202ENST00000470357 KTN1Q86UP2 1357 aaKnown RBP9.06□□□□□ -0.96
VAMP3-202ENST00000470357 BLMP54132 1417 aaPredicted RBP9.05□□□□□ -0.96
VAMP3-202ENST00000470357 ITSN1Q15811 1721 aa9.05□□□□□ -0.96
VAMP3-202ENST00000470357 GLI3P10071 1580 aa9.05□□□□□ -0.96
VAMP3-202ENST00000470357 PXDNQ92626 1479 aa9.05□□□□□ -0.96
VAMP3-202ENST00000470357 EYA1Q99502 592 aa9.05□□□□□ -0.96
VAMP3-202ENST00000470357 ADGRG1Q9Y653 693 aa9.05□□□□□ -0.96
VAMP3-202ENST00000470357 SLIT2O94813 1529 aa9.05□□□□□ -0.96
VAMP3-202ENST00000470357 MINK1Q8N4C8 1332 aaPredicted RBP9.05□□□□□ -0.96
VAMP3-202ENST00000470357 SRPK2P78362 688 aaKnown RBP9.04□□□□□ -0.96
VAMP3-202ENST00000470357 SAFB2Q14151 953 aaKnown RBP eCLIP9.04□□□□□ -0.96
VAMP3-202ENST00000470357 ANKK1Q8NFD2 765 aa9.04□□□□□ -0.96
VAMP3-202ENST00000470357 LRP5O75197 1615 aa9.03□□□□□ -0.96
VAMP3-202ENST00000470357 PTPN5P54829 565 aa9.03□□□□□ -0.96
VAMP3-202ENST00000470357 WAPLQ7Z5K2 1190 aa9.03□□□□□ -0.96
VAMP3-202ENST00000470357 UNC5CLQ8IV45 518 aa9.03□□□□□ -0.96
VAMP3-202ENST00000470357 NPHP3Q7Z494 1330 aa9.03□□□□□ -0.96
VAMP3-202ENST00000470357 USP32Q8NFA0 1604 aa9.02□□□□□ -0.96
VAMP3-202ENST00000470357 PLEKHH1Q9ULM0 1364 aa9.02□□□□□ -0.97
VAMP3-202ENST00000470357 WASLO00401 505 aaPredicted RBP9.02□□□□□ -0.97
VAMP3-202ENST00000470357 FOXO3O43524 673 aa9.02□□□□□ -0.97
VAMP3-202ENST00000470357 PRKCSHP14314 528 aaPredicted RBP9.02□□□□□ -0.97
VAMP3-202ENST00000470357 BCAMP50895 628 aa9.02□□□□□ -0.97
VAMP3-202ENST00000470357 XPCQ01831 940 aaPredicted RBP9.02□□□□□ -0.97
VAMP3-202ENST00000470357 ESCO1Q5FWF5 840 aa9.02□□□□□ -0.97
VAMP3-202ENST00000470357 THSD4Q6ZMP0 1018 aa9.02□□□□□ -0.97
VAMP3-202ENST00000470357 RBM46Q8TBY0 533 aaKnown RBP9.02□□□□□ -0.97
VAMP3-202ENST00000470357 CDK19Q9BWU1 502 aa9.02□□□□□ -0.97
VAMP3-202ENST00000470357 TERF2IPQ9NYB0 399 aa9.02□□□□□ -0.97
VAMP3-202ENST00000470357 CDC42BPGQ6DT37 1551 aa9.02□□□□□ -0.97
VAMP3-202ENST00000470357 MARF1Q9Y4F3 1742 aaKnown RBP9.02□□□□□ -0.97
VAMP3-202ENST00000470357 ATP7BP35670 1465 aa9.02□□□□□ -0.97
VAMP3-202ENST00000470357 NPC1L1Q9UHC9 1359 aa9.01□□□□□ -0.97
VAMP3-202ENST00000470357 SAMD7Q7Z3H4 446 aa9.01□□□□□ -0.97
VAMP3-202ENST00000470357 SEPT12Q8IYM1 358 aa9.01□□□□□ -0.97
VAMP3-202ENST00000470357 ZC3H15Q8WU90 426 aaKnown RBP9.01□□□□□ -0.97
VAMP3-202ENST00000470357 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.01□□□□□ -0.97
VAMP3-202ENST00000470357 PANK3Q9H999 370 aa9.01□□□□□ -0.97
VAMP3-202ENST00000470357 FMN2Q9NZ56 1722 aa9.01□□□□□ -0.97
VAMP3-202ENST00000470357 KNSTRNQ9Y448 316 aa9.01□□□□□ -0.97
VAMP3-202ENST00000470357 TOPAZ1Q8N9V7 1692 aa9□□□□□ -0.97
VAMP3-202ENST00000470357 ANKRD36BQ8N2N9 1353 aa9□□□□□ -0.97
VAMP3-202ENST00000470357 ANKARQ7Z5J8 1434 aa9□□□□□ -0.97
VAMP3-202ENST00000470357 AKAP12Q02952 1782 aa9□□□□□ -0.97
VAMP3-202ENST00000470357 SOWAHBA6NEL2 793 aa9□□□□□ -0.97
VAMP3-202ENST00000470357 CCER2I3L3R5 266 aa9□□□□□ -0.97
VAMP3-202ENST00000470357 OATP04181 439 aa9□□□□□ -0.97
VAMP3-202ENST00000470357 HDGFL2Q7Z4V5 671 aaPredicted RBP9□□□□□ -0.97
VAMP3-202ENST00000470357 TMC1Q8TDI8 760 aa9□□□□□ -0.97
VAMP3-202ENST00000470357 CDKN2AIPQ9NXV6 580 aaPredicted RBP9□□□□□ -0.97
VAMP3-202ENST00000470357 HCSTQ9UBK5 93 aa9□□□□□ -0.97
VAMP3-202ENST00000470357 BRWD3Q6RI45 1802 aa9□□□□□ -0.97
VAMP3-202ENST00000470357 SPATA31A3Q5VYP0 1347 aa9□□□□□ -0.97
VAMP3-202ENST00000470357 PER1O15534 1290 aaPredicted RBP8.99□□□□□ -0.97
VAMP3-202ENST00000470357 RALBP1Q15311 655 aa8.99□□□□□ -0.97
VAMP3-202ENST00000470357 VPS72Q15906 364 aa8.99□□□□□ -0.97
VAMP3-202ENST00000470357 PXYLP1Q8TE99 480 aa8.99□□□□□ -0.97
VAMP3-202ENST00000470357 LRCH3Q96II8 777 aa8.99□□□□□ -0.97
VAMP3-202ENST00000470357 PRKRIP1Q9H875 184 aaPredicted RBP8.99□□□□□ -0.97
VAMP3-202ENST00000470357 NSD2O96028 1365 aa8.99□□□□□ -0.97
VAMP3-202ENST00000470357 MON2Q7Z3U7 1717 aa8.98□□□□□ -0.97
VAMP3-202ENST00000470357 RCCD1A6NED2 376 aa8.98□□□□□ -0.97
VAMP3-202ENST00000470357 SWT1Q5T5J6 900 aaKnown RBP8.98□□□□□ -0.97
VAMP3-202ENST00000470357 NUDT16Q96DE0 195 aaKnown RBP8.98□□□□□ -0.97
VAMP3-202ENST00000470357 CGNL1Q0VF96 1302 aa8.98□□□□□ -0.97
VAMP3-202ENST00000470357 PPIP5K1Q6PFW1 1433 aa8.97□□□□□ -0.97
VAMP3-202ENST00000470357 ANKRD26Q9UPS8 1709 aa8.97□□□□□ -0.97
VAMP3-202ENST00000470357 RGPD8O14715 1765 aaPredicted RBP8.97□□□□□ -0.97
VAMP3-202ENST00000470357 KIF20BQ96Q89 1820 aa8.97□□□□□ -0.97
VAMP3-202ENST00000470357 KRT27Q7Z3Y8 459 aa8.97□□□□□ -0.97
VAMP3-202ENST00000470357 METTL3Q86U44 580 aaKnown RBP8.97□□□□□ -0.97
VAMP3-202ENST00000470357 KRI1Q8N9T8 703 aaKnown RBP8.97□□□□□ -0.97
VAMP3-202ENST00000470357 SLC12A5Q9H2X9 1139 aa8.97□□□□□ -0.97
VAMP3-202ENST00000470357 IRF6O14896 467 aa8.96□□□□□ -0.98
VAMP3-202ENST00000470357 ZMYND10O75800 440 aa8.96□□□□□ -0.98
VAMP3-202ENST00000470357 DNAJB2P25686 324 aa8.96□□□□□ -0.98
VAMP3-202ENST00000470357 MAP2K5Q13163 448 aa8.96□□□□□ -0.98
VAMP3-202ENST00000470357 SF3B2Q13435 895 aaKnown RBP8.96□□□□□ -0.98
VAMP3-202ENST00000470357 HPS5Q9UPZ3 1129 aa8.96□□□□□ -0.98
VAMP3-202ENST00000470357 PARD3Q8TEW0 1356 aa8.96□□□□□ -0.98
VAMP3-202ENST00000470357 NSD3Q9BZ95 1437 aa8.96□□□□□ -0.98
VAMP3-202ENST00000470357 KIF1AQ12756 1690 aa8.95□□□□□ -0.98
VAMP3-202ENST00000470357 PLEKHG3A1L390 1219 aa8.95□□□□□ -0.98
VAMP3-202ENST00000470357 BARGINQ6ZT62 677 aa8.95□□□□□ -0.98
VAMP3-202ENST00000470357 CABLES1Q8TDN4 633 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms