RNA–Protein interactions for RNA: ENST00000468480.5

RNF6-204, Transcript of ring finger protein 6, humanhuman

TSL 1 (best)

Gene RNF6, Length 1,105 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6-204ENST00000468480 CCDC27Q2M243 656 aa21.6■■□□□ 1.05
RNF6-204ENST00000468480 COL3A1P02461 1466 aaPredicted RBP21.59■■□□□ 1.05
RNF6-204ENST00000468480 GPBP1L1Q9HC44 474 aaPredicted RBP21.59■■□□□ 1.05
RNF6-204ENST00000468480 CCNL1Q9UK58 526 aaPredicted RBP21.59■■□□□ 1.05
RNF6-204ENST00000468480 MEGF6O75095 1541 aa21.59■■□□□ 1.05
RNF6-204ENST00000468480 MAPK8IP3Q9UPT6 1336 aa21.58■■□□□ 1.05
RNF6-204ENST00000468480 MSH5O43196 834 aa21.58■■□□□ 1.05
RNF6-204ENST00000468480 ZNF526Q8TF50 670 aaPredicted RBP21.58■■□□□ 1.05
RNF6-204ENST00000468480 LTV1Q96GA3 475 aaPredicted RBP21.58■■□□□ 1.05
RNF6-204ENST00000468480 IP6K1Q92551 441 aa21.57■■□□□ 1.04
RNF6-204ENST00000468480 UBR3Q6ZT12 1888 aa21.57■■□□□ 1.04
RNF6-204ENST00000468480 U2SURPO15042 1029 aaKnown RBP21.56■■□□□ 1.04
RNF6-204ENST00000468480 WDR63Q8IWG1 891 aa21.56■■□□□ 1.04
RNF6-204ENST00000468480 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.56■■□□□ 1.04
RNF6-204ENST00000468480 ITGB4P16144 1822 aa21.56■■□□□ 1.04
RNF6-204ENST00000468480 RRP1P56182 461 aaKnown RBP21.55■■□□□ 1.04
RNF6-204ENST00000468480 SLFN5Q08AF3 891 aa21.55■■□□□ 1.04
RNF6-204ENST00000468480 POLKQ9UBT6 870 aa21.55■■□□□ 1.04
RNF6-204ENST00000468480 CDCA7LQ96GN5 454 aa21.54■■□□□ 1.04
RNF6-204ENST00000468480 C4BP0C0L5 1744 aa21.53■■□□□ 1.04
RNF6-204ENST00000468480 FCHSD2O94868 740 aa21.53■■□□□ 1.04
RNF6-204ENST00000468480 CD2APQ9Y5K6 639 aa21.53■■□□□ 1.04
RNF6-204ENST00000468480 DUSP27Q5VZP5 1158 aa21.52■■□□□ 1.04
RNF6-204ENST00000468480 WWC1Q8IX03 1113 aa21.51■■□□□ 1.03
RNF6-204ENST00000468480 TRMT2AQ8IZ69 625 aaKnown RBP21.51■■□□□ 1.03
RNF6-204ENST00000468480 ZCRB1Q8TBF4 217 aaKnown RBP21.51■■□□□ 1.03
RNF6-204ENST00000468480 FBLN1P23142 703 aa21.5■■□□□ 1.03
RNF6-204ENST00000468480 AMIGO3Q86WK7 504 aa21.5■■□□□ 1.03
RNF6-204ENST00000468480 WWC3Q9ULE0 1092 aa21.5■■□□□ 1.03
RNF6-204ENST00000468480 KIF3CO14782 793 aa21.49■■□□□ 1.03
RNF6-204ENST00000468480 IRX6P78412 446 aaPredicted RBP21.49■■□□□ 1.03
RNF6-204ENST00000468480 MYH16Q9H6N6 1097 aa21.49■■□□□ 1.03
RNF6-204ENST00000468480 MAP3K19Q56UN5 1328 aa21.49■■□□□ 1.03
RNF6-204ENST00000468480 KIAA1551Q9HCM1 1747 aa21.49■■□□□ 1.03
RNF6-204ENST00000468480 CICQ96RK0 1608 aaPredicted RBP21.48■■□□□ 1.03
RNF6-204ENST00000468480 PPM1GO15355 546 aaPredicted RBP21.48■■□□□ 1.03
RNF6-204ENST00000468480 HOXC9P31274 260 aa21.48■■□□□ 1.03
RNF6-204ENST00000468480 MAP2P11137 1827 aaKnown RBP21.48■■□□□ 1.03
RNF6-204ENST00000468480 IGSF1Q8N6C5 1336 aa21.46■■□□□ 1.03
RNF6-204ENST00000468480 N4BP2Q86UW6 1770 aaPredicted RBP21.46■■□□□ 1.03
RNF6-204ENST00000468480 KIF13BQ9NQT8 1826 aa21.45■■□□□ 1.03
RNF6-204ENST00000468480 PCNTO95613 3336 aa21.45■■□□□ 1.02
RNF6-204ENST00000468480 CALD1Q05682 793 aaKnown RBP21.45■■□□□ 1.02
RNF6-204ENST00000468480 SMIM5Q71RC9 77 aa21.45■■□□□ 1.02
RNF6-204ENST00000468480 IL16Q14005 1332 aa21.45■■□□□ 1.02
RNF6-204ENST00000468480 KIF24Q5T7B8 1368 aa21.45■■□□□ 1.02
RNF6-204ENST00000468480 PLEKHF1Q96S99 279 aa21.44■■□□□ 1.02
RNF6-204ENST00000468480 CT47B1P0C2W7 299 aaPredicted RBP21.43■■□□□ 1.02
RNF6-204ENST00000468480 NBPF6Q5VWK0 638 aa21.43■■□□□ 1.02
RNF6-204ENST00000468480 USHBP1Q8N6Y0 703 aa21.43■■□□□ 1.02
RNF6-204ENST00000468480 NBPF4Q96M43 638 aa21.43■■□□□ 1.02
RNF6-204ENST00000468480 EMILIN1Q9Y6C2 1016 aa21.43■■□□□ 1.02
RNF6-204ENST00000468480 PALLDQ8WX93 1383 aa21.43■■□□□ 1.02
RNF6-204ENST00000468480 WDR90Q96KV7 1748 aa21.43■■□□□ 1.02
RNF6-204ENST00000468480 IL13P35225 146 aa21.42■■□□□ 1.02
RNF6-204ENST00000468480 TMPOP42166 694 aaKnown RBP21.42■■□□□ 1.02
RNF6-204ENST00000468480 LMOD3Q0VAK6 560 aa21.42■■□□□ 1.02
RNF6-204ENST00000468480 NEUROD2Q15784 382 aa21.41■■□□□ 1.02
RNF6-204ENST00000468480 DNAJC5GQ8N7S2 189 aa21.41■■□□□ 1.02
RNF6-204ENST00000468480 PKD1L3Q7Z443 1732 aa21.41■■□□□ 1.02
RNF6-204ENST00000468480 AMPHP49418 695 aa21.4■■□□□ 1.02
RNF6-204ENST00000468480 FLAD1Q8NFF5 587 aa21.4■■□□□ 1.02
RNF6-204ENST00000468480 BRCA1P38398 1863 aaKnown RBP21.4■■□□□ 1.02
RNF6-204ENST00000468480 RSPH6AQ9H0K4 717 aa21.39■■□□□ 1.01
RNF6-204ENST00000468480 RRP7AQ9Y3A4 280 aaKnown RBP21.39■■□□□ 1.01
RNF6-204ENST00000468480 FLT4P35916 1363 aa21.38■■□□□ 1.01
RNF6-204ENST00000468480 PRKAR2BP31323 418 aa21.37■■□□□ 1.01
RNF6-204ENST00000468480 RRS1Q15050 365 aaKnown RBP21.37■■□□□ 1.01
RNF6-204ENST00000468480 CCDC136Q96JN2 1154 aa21.37■■□□□ 1.01
RNF6-204ENST00000468480 RTL1A6NKG5 1358 aa21.36■■□□□ 1.01
RNF6-204ENST00000468480 PHF14O94880 888 aa21.36■■□□□ 1.01
RNF6-204ENST00000468480 APLP1P51693 650 aa21.36■■□□□ 1.01
RNF6-204ENST00000468480 RIPK4P57078 832 aa21.36■■□□□ 1.01
RNF6-204ENST00000468480 NFE2L2Q16236 605 aa21.36■■□□□ 1.01
RNF6-204ENST00000468480 MPRIPQ6WCQ1 1025 aa21.36■■□□□ 1.01
RNF6-204ENST00000468480 AK7Q96M32 723 aa21.35■■□□□ 1.01
RNF6-204ENST00000468480 PXDNLA1KZ92 1463 aa21.34■■□□□ 1.01
RNF6-204ENST00000468480 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.34■■□□□ 1.01
RNF6-204ENST00000468480 CYP27B1O15528 508 aa21.34■■□□□ 1.01
RNF6-204ENST00000468480 RAPGEF4Q8WZA2 1011 aa21.34■■□□□ 1.01
RNF6-204ENST00000468480 PCDH11XQ9BZA7 1347 aa21.33■■□□□ 1.01
RNF6-204ENST00000468480 PCDH11YQ9BZA8 1340 aa21.33■■□□□ 1.01
RNF6-204ENST00000468480 TATP17735 454 aaPredicted RBP21.31■■□□□ 1
RNF6-204ENST00000468480 LINC00116Q8NCU8 138 aa21.31■■□□□ 1
RNF6-204ENST00000468480 SPINK5Q9NQ38 1064 aaPredicted RBP21.31■■□□□ 1
RNF6-204ENST00000468480 ARFGEF1Q9Y6D6 1849 aa21.31■■□□□ 1
RNF6-204ENST00000468480 TOMM70O94826 608 aa21.3■■□□□ 1
RNF6-204ENST00000468480 MS4A1P11836 297 aa21.3■■□□□ 1
RNF6-204ENST00000468480 EIF4A2Q14240 407 aaKnown RBP21.3■■□□□ 1
RNF6-204ENST00000468480 SSFA2P28290 1259 aa21.29■■□□□ 1
RNF6-204ENST00000468480 PIGBQ92521 554 aa21.29■■□□□ 1
RNF6-204ENST00000468480 NMRK2Q9NPI5 230 aa21.29■■□□□ 1
RNF6-204ENST00000468480 TRIM35Q9UPQ4 493 aa21.29■■□□□ 1
RNF6-204ENST00000468480 HMOX1P09601 288 aa21.28■■□□□ 1
RNF6-204ENST00000468480 CANXP27824 592 aaKnown RBP21.28■■□□□ 1
RNF6-204ENST00000468480 AAMPQ13685 434 aa21.28■■□□□ 1
RNF6-204ENST00000468480 HSP90AB2PQ58FF8 381 aa21.28■■□□□ 1
RNF6-204ENST00000468480 B4GALNT3Q6L9W6 998 aa21.28■■□□□ 1
RNF6-204ENST00000468480 ZNF428Q96B54 188 aa21.28■■□□□ 1
RNF6-204ENST00000468480 HTRA3P83110 453 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms