RNA–Protein interactions for RNA: ENST00000468027.5

PTMA-211, Transcript of prothymosin alpha, humanhuman

TSL 1 (best)

Gene PTMA, Length 621 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-211ENST00000468027 UTRNP46939 3433 aa17.46■□□□□ 0.39
PTMA-211ENST00000468027 SMARCC1Q92922 1105 aaPredicted RBP17.45■□□□□ 0.38
PTMA-211ENST00000468027 PHACTR3Q96KR7 559 aa17.45■□□□□ 0.38
PTMA-211ENST00000468027 LGR6Q9HBX8 967 aa17.45■□□□□ 0.38
PTMA-211ENST00000468027 C1orf141Q5JVX7 400 aa17.44■□□□□ 0.38
PTMA-211ENST00000468027 SLC4A9Q96Q91 983 aa17.44■□□□□ 0.38
PTMA-211ENST00000468027 PNPLA7Q6ZV29 1317 aa17.43■□□□□ 0.38
PTMA-211ENST00000468027 C4AP0C0L4 1744 aa17.42■□□□□ 0.38
PTMA-211ENST00000468027 RNMTO43148 476 aaKnown RBP17.42■□□□□ 0.38
PTMA-211ENST00000468027 FCHSD2O94868 740 aa17.42■□□□□ 0.38
PTMA-211ENST00000468027 NFATC2IPQ8NCF5 419 aa17.42■□□□□ 0.38
PTMA-211ENST00000468027 KCPQ6ZWJ8 1503 aa17.42■□□□□ 0.38
PTMA-211ENST00000468027 LOC102724428A0A0B4J2F2 783 aa17.41■□□□□ 0.38
PTMA-211ENST00000468027 PRKAR2BP31323 418 aa17.41■□□□□ 0.38
PTMA-211ENST00000468027 SIK1P57059 783 aa17.41■□□□□ 0.38
PTMA-211ENST00000468027 SGIP1Q9BQI5 828 aa17.41■□□□□ 0.38
PTMA-211ENST00000468027 NUDCQ9Y266 331 aa17.41■□□□□ 0.38
PTMA-211ENST00000468027 CEMIPQ8WUJ3 1361 aa17.4■□□□□ 0.38
PTMA-211ENST00000468027 CABP4P57796 275 aa17.4■□□□□ 0.38
PTMA-211ENST00000468027 ITPK1Q13572 414 aa17.4■□□□□ 0.38
PTMA-211ENST00000468027 AMIGO3Q86WK7 504 aa17.4■□□□□ 0.38
PTMA-211ENST00000468027 PRKRIP1Q9H875 184 aaPredicted RBP17.4■□□□□ 0.38
PTMA-211ENST00000468027 SLC52A2Q9HAB3 445 aa17.4■□□□□ 0.38
PTMA-211ENST00000468027 MYBBP1AQ9BQG0 1328 aaKnown RBP17.4■□□□□ 0.38
PTMA-211ENST00000468027 MAP3K5Q99683 1374 aa17.4■□□□□ 0.38
PTMA-211ENST00000468027 U2AF1L5P0DN76 240 aaPredicted RBP17.39■□□□□ 0.37
PTMA-211ENST00000468027 PTGER2P43116 358 aa17.39■□□□□ 0.37
PTMA-211ENST00000468027 U2AF1Q01081 240 aaKnown RBP eCLIP17.39■□□□□ 0.37
PTMA-211ENST00000468027 LINC00116Q8NCU8 138 aa17.39■□□□□ 0.37
PTMA-211ENST00000468027 IL17REQ8NFR9 667 aa17.39■□□□□ 0.37
PTMA-211ENST00000468027 PLEKHF1Q96S99 279 aa17.39■□□□□ 0.37
PTMA-211ENST00000468027 ZNF316A6NFI3 1004 aaPredicted RBP17.38■□□□□ 0.37
PTMA-211ENST00000468027 GAS2L2Q8NHY3 880 aa17.38■□□□□ 0.37
PTMA-211ENST00000468027 KDM3BQ7LBC6 1761 aa17.38■□□□□ 0.37
PTMA-211ENST00000468027 SPON1Q9HCB6 807 aa17.37■□□□□ 0.37
PTMA-211ENST00000468027 GNAT3A8MTJ3 354 aa17.36■□□□□ 0.37
PTMA-211ENST00000468027 ZBTB7AO95365 584 aa17.36■□□□□ 0.37
PTMA-211ENST00000468027 MTFR1LQ9H019 292 aa17.36■□□□□ 0.37
PTMA-211ENST00000468027 ATP6V1AP38606 617 aa17.35■□□□□ 0.37
PTMA-211ENST00000468027 COL23A1Q86Y22 540 aaPredicted RBP17.35■□□□□ 0.37
PTMA-211ENST00000468027 TFCP2L1Q9NZI6 479 aa17.35■□□□□ 0.37
PTMA-211ENST00000468027 SLC16A10Q8TF71 515 aa17.34■□□□□ 0.37
PTMA-211ENST00000468027 HMGB2P26583 209 aaKnown RBP17.33■□□□□ 0.36
PTMA-211ENST00000468027 ATF5Q9Y2D1 282 aaPredicted RBP17.33■□□□□ 0.36
PTMA-211ENST00000468027 SLC39A6Q13433 755 aa17.32■□□□□ 0.36
PTMA-211ENST00000468027 RC3H1Q5TC82 1133 aaKnown RBP17.31■□□□□ 0.36
PTMA-211ENST00000468027 SMIM5Q71RC9 77 aa17.31■□□□□ 0.36
PTMA-211ENST00000468027 RBM42Q9BTD8 480 aaKnown RBP17.31■□□□□ 0.36
PTMA-211ENST00000468027 KIF13BQ9NQT8 1826 aa17.31■□□□□ 0.36
PTMA-211ENST00000468027 CNTNAP4Q9C0A0 1308 aa17.3■□□□□ 0.36
PTMA-211ENST00000468027 HTATSF1O43719 755 aaKnown RBP17.3■□□□□ 0.36
PTMA-211ENST00000468027 PTCD1O75127 700 aaKnown RBP17.3■□□□□ 0.36
PTMA-211ENST00000468027 SSFA2P28290 1259 aa17.29■□□□□ 0.36
PTMA-211ENST00000468027 LAMB4A4D0S4 1761 aa17.29■□□□□ 0.36
PTMA-211ENST00000468027 FLAD1Q8NFF5 587 aa17.28■□□□□ 0.36
PTMA-211ENST00000468027 AK7Q96M32 723 aa17.28■□□□□ 0.36
PTMA-211ENST00000468027 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.27■□□□□ 0.36
PTMA-211ENST00000468027 MCM10Q7L590 875 aa17.27■□□□□ 0.36
PTMA-211ENST00000468027 VSIG10Q8N0Z9 540 aa17.27■□□□□ 0.36
PTMA-211ENST00000468027 KIAA1551Q9HCM1 1747 aa17.27■□□□□ 0.35
PTMA-211ENST00000468027 DCTN1Q14203 1278 aa17.26■□□□□ 0.35
PTMA-211ENST00000468027 NFE2L2Q16236 605 aa17.26■□□□□ 0.35
PTMA-211ENST00000468027 INTS5Q6P9B9 1019 aaKnown RBP17.26■□□□□ 0.35
PTMA-211ENST00000468027 ZNF790Q6PG37 636 aa17.26■□□□□ 0.35
PTMA-211ENST00000468027 GNPATO15228 680 aa17.25■□□□□ 0.35
PTMA-211ENST00000468027 KCNQ3O43525 872 aa17.25■□□□□ 0.35
PTMA-211ENST00000468027 RPS6KA4O75676 772 aa17.25■□□□□ 0.35
PTMA-211ENST00000468027 TEFQ10587 303 aa17.25■□□□□ 0.35
PTMA-211ENST00000468027 CCDC184Q52MB2 194 aa17.25■□□□□ 0.35
PTMA-211ENST00000468027 DNAJC10Q8IXB1 793 aa17.25■□□□□ 0.35
PTMA-211ENST00000468027 ZNF496Q96IT1 587 aaPredicted RBP17.25■□□□□ 0.35
PTMA-211ENST00000468027 AFDNP55196 1824 aaKnown RBP17.25■□□□□ 0.35
PTMA-211ENST00000468027 HEG1Q9ULI3 1381 aa17.25■□□□□ 0.35
PTMA-211ENST00000468027 CYP19A1P11511 503 aaPredicted RBP17.24■□□□□ 0.35
PTMA-211ENST00000468027 CRKLP46109 303 aaKnown RBP17.24■□□□□ 0.35
PTMA-211ENST00000468027 PNNQ9H307 717 aaKnown RBP17.24■□□□□ 0.35
PTMA-211ENST00000468027 ADAMTS8Q9UP79 889 aa17.24■□□□□ 0.35
PTMA-211ENST00000468027 BCORQ6W2J9 1755 aa17.24■□□□□ 0.35
PTMA-211ENST00000468027 PHF14O94880 888 aa17.23■□□□□ 0.35
PTMA-211ENST00000468027 ARXQ96QS3 562 aa17.23■□□□□ 0.35
PTMA-211ENST00000468027 BRCA1P38398 1863 aaKnown RBP17.22■□□□□ 0.35
PTMA-211ENST00000468027 BTBD11A6QL63 1104 aa17.22■□□□□ 0.35
PTMA-211ENST00000468027 ADRA2BP18089 450 aa17.22■□□□□ 0.35
PTMA-211ENST00000468027 ARHGEF1Q92888 912 aaKnown RBP17.22■□□□□ 0.35
PTMA-211ENST00000468027 RTCBQ9Y3I0 505 aaKnown RBP17.22■□□□□ 0.35
PTMA-211ENST00000468027 SCN7AQ01118 1682 aa17.22■□□□□ 0.35
PTMA-211ENST00000468027 NRXN2Q9P2S2 1712 aa17.21■□□□□ 0.35
PTMA-211ENST00000468027 TMPOP42166 694 aaKnown RBP17.21■□□□□ 0.35
PTMA-211ENST00000468027 RTF1Q92541 710 aaKnown RBP17.21■□□□□ 0.35
PTMA-211ENST00000468027 FHDC1Q9C0D6 1143 aaPredicted RBP17.21■□□□□ 0.35
PTMA-211ENST00000468027 CHD4Q14839 1912 aa17.21■□□□□ 0.35
PTMA-211ENST00000468027 TRAPPC3LQ5T215 181 aa17.2■□□□□ 0.34
PTMA-211ENST00000468027 MSL1Q68DK7 614 aa17.2■□□□□ 0.34
PTMA-211ENST00000468027 SYT17Q9BSW7 474 aa17.2■□□□□ 0.34
PTMA-211ENST00000468027 PPP1R1BQ9UD71 204 aaPredicted RBP17.2■□□□□ 0.34
PTMA-211ENST00000468027 SOS1Q07889 1333 aaPredicted RBP17.2■□□□□ 0.34
PTMA-211ENST00000468027 MAPK8IP3Q9UPT6 1336 aa17.2■□□□□ 0.34
PTMA-211ENST00000468027 MSH5O43196 834 aa17.19■□□□□ 0.34
PTMA-211ENST00000468027 TAF7Q15545 349 aaPredicted RBP17.19■□□□□ 0.34
PTMA-211ENST00000468027 CCDC146Q8IYE0 955 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms