RNA–Protein interactions for RNA: ENST00000468027.5

PTMA-211, Transcript of prothymosin alpha, humanhuman

TSL 1 (best)

Gene PTMA, Length 621 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-211ENST00000468027 EIF4G2P78344 907 aaKnown RBP eCLIP18.19■□□□□ 0.51e-76■□□□□ 9.2
PTMA-211ENST00000468027 CPSF6Q16630 551 aaKnown RBP eCLIP12.18□□□□□ -0.463e-61■□□□□ 9.8
PTMA-211ENST00000468027 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.85■□□□□ 0.778e-58■■■■□ 24.5
PTMA-211ENST00000468027 PUM1Q14671 1186 aaKnown RBP eCLIP13.23□□□□□ -0.294e-45■■□□□ 12.7
PTMA-211ENST00000468027 EIF3DO15371 548 aaKnown RBP eCLIP14.13□□□□□ -0.154e-43■□□□□ 8.7
PTMA-211ENST00000468027 GPKOWQ92917 476 aaPredicted RBP eCLIP14.98□□□□□ -0.013e-39■■□□□ 12.3
PTMA-211ENST00000468027 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.34□□□□□ -0.271e-28■■■■■ 56.4
PTMA-211ENST00000468027 SRSF1Q07955 248 aaKnown RBP eCLIP12.14□□□□□ -0.473e-27■■■■■ 29.3
PTMA-211ENST00000468027 AARSP49588 968 aaKnown RBP eCLIP14.13□□□□□ -0.151e-25■□□□□ 8.5
PTMA-211ENST00000468027 SRSF9Q13242 221 aaKnown RBP eCLIP8.03□□□□□ -1.122e-24■■■■□ 22.1
PTMA-211ENST00000468027 ZNF622Q969S3 477 aaKnown RBP eCLIP16.75■□□□□ 0.275e-24■■■■□ 25.3
PTMA-211ENST00000468027 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.75□□□□□ -0.215e-24■■□□□ 12.3
PTMA-211ENST00000468027 AQRO60306 1485 aaKnown RBP eCLIP22.98■■□□□ 1.274e-20■■■■■ 37.2
PTMA-211ENST00000468027 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.91□□□□□ -0.52e-19■■□□□ 12.6
PTMA-211ENST00000468027 WDR43Q15061 677 aaKnown RBP eCLIP17.17■□□□□ 0.342e-17■■■□□ 15.8
PTMA-211ENST00000468027 LARP4Q71RC2 724 aaKnown RBP eCLIP11.89□□□□□ -0.514e-17■□□□□ 8.1
PTMA-211ENST00000468027 LSM11P83369 360 aaKnown RBP eCLIP11.38□□□□□ -0.594e-17■■■■■ 28.3
PTMA-211ENST00000468027 TRA2AQ13595 282 aaKnown RBP eCLIP12.71□□□□□ -0.372e-16■■■■■ 38.8
PTMA-211ENST00000468027 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.71■□□□□ 0.113e-15■□□□□ 9.5
PTMA-211ENST00000468027 NPM1P06748 294 aaKnown RBP eCLIP21.57■■□□□ 1.043e-14■□□□□ 9
PTMA-211ENST00000468027 SRSF7Q16629 238 aaKnown RBP eCLIP10.29□□□□□ -0.763e-13■■■□□ 17.5
PTMA-211ENST00000468027 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.67■□□□□ 0.426e-13■■■□□ 15.1
PTMA-211ENST00000468027 TARDBPQ13148 414 aaKnown RBP eCLIP12.86□□□□□ -0.356e-13■□□□□ 9.1
PTMA-211ENST00000468027 RBM22Q9NW64 420 aaKnown RBP eCLIP13.06□□□□□ -0.321e-12■■■■■ 52.7
PTMA-211ENST00000468027 AGGF1Q8N302 714 aaeCLIP12.73□□□□□ -0.379e-12■■■□□ 19
PTMA-211ENST00000468027 FXR2P51116 673 aaKnown RBP eCLIP14.54□□□□□ -0.089e-12■■□□□ 13.9
PTMA-211ENST00000468027 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.98□□□□□ -0.491e-11■□□□□ 8.9
PTMA-211ENST00000468027 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.58□□□□□ -0.42e-11■■■■■ 27.1
PTMA-211ENST00000468027 FTOQ9C0B1 505 aaKnown RBP eCLIP14.64□□□□□ -0.073e-11■■■■□ 20.6
PTMA-211ENST00000468027 SND1Q7KZF4 910 aaKnown RBP eCLIP13.37□□□□□ -0.277e-11■■■■■ 40.2
PTMA-211ENST00000468027 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.12□□□□□ -0.153e-10■□□□□ 9.9
PTMA-211ENST00000468027 UPF1Q92900 1129 aaKnown RBP eCLIP18.17■□□□□ 0.53e-10■■□□□ 11.5
PTMA-211ENST00000468027 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.64□□□□□ -0.395e-9■■■□□ 16
PTMA-211ENST00000468027 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.14■□□□□ 0.985e-9■■■■□ 20.9
PTMA-211ENST00000468027 PPIGQ13427 754 aaKnown RBP eCLIP14.77□□□□□ -0.056e-9■■■■■ 32.8
PTMA-211ENST00000468027 FKBP4Q02790 459 aaKnown RBP eCLIP16.62■□□□□ 0.256e-9■■■■■ 44.9
PTMA-211ENST00000468027 TIA1P31483 386 aaKnown RBP eCLIP12.03□□□□□ -0.481e-8■■□□□ 11.8
PTMA-211ENST00000468027 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.79□□□□□ -0.042e-8■■■□□ 17.4
PTMA-211ENST00000468027 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.69□□□□□ -0.222e-8■■□□□ 12
PTMA-211ENST00000468027 RBM15Q96T37 977 aaKnown RBP eCLIP13□□□□□ -0.333e-8■□□□□ 8.9
PTMA-211ENST00000468027 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.83□□□□□ -0.684e-8■■■□□ 15.1
PTMA-211ENST00000468027 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.33■□□□□ 0.045e-8■■■■□ 25.8
PTMA-211ENST00000468027 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.51■□□□□ 0.078e-8■■■■■ 38.3
PTMA-211ENST00000468027 NONOQ15233 471 aaKnown RBP eCLIP14.74□□□□□ -0.058e-8■■■■■ 33.2
PTMA-211ENST00000468027 HNRNPMP52272 730 aaKnown RBP eCLIP20.54■□□□□ 0.889e-8■■■■■ 73
PTMA-211ENST00000468027 SF3A3Q12874 501 aaKnown RBP eCLIP11.57□□□□□ -0.569e-8■■■□□ 19.1
PTMA-211ENST00000468027 ZC3H11AO75152 810 aaKnown RBP eCLIP14.28□□□□□ -0.121e-7■■■■□ 24.3
PTMA-211ENST00000468027 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.05□□□□□ -0.482e-7■■■■□ 21
PTMA-211ENST00000468027 EWSR1Q01844 656 aaKnown RBP eCLIP9.5□□□□□ -0.892e-7■■■■□ 21.5
PTMA-211ENST00000468027 CDC40O60508 579 aaKnown RBP eCLIP11.86□□□□□ -0.512e-7■■■■□ 22.9
PTMA-211ENST00000468027 G3BP1Q13283 466 aaKnown RBP eCLIP16.08■□□□□ 0.163e-7■□□□□ 8.4
PTMA-211ENST00000468027 YBX3P16989 372 aaKnown RBP eCLIP17.01■□□□□ 0.313e-7■□□□□ 8.5
PTMA-211ENST00000468027 NKRFO15226 690 aaKnown RBP eCLIP14.98□□□□□ -0.013e-7■□□□□ 10.4
PTMA-211ENST00000468027 SFPQP23246 707 aaKnown RBP eCLIP14.43□□□□□ -0.13e-7■■□□□ 13.5
PTMA-211ENST00000468027 SF3B4Q15427 424 aaKnown RBP eCLIP11.69□□□□□ -0.543e-7■■■■■ 31.2
PTMA-211ENST00000468027 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.48□□□□□ -0.254e-7■■■□□ 18.2
PTMA-211ENST00000468027 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.36□□□□□ -0.115e-7■■■■□ 24.7
PTMA-211ENST00000468027 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.2□□□□□ -0.625e-7■■■■□ 23.4
PTMA-211ENST00000468027 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.25□□□□□ -0.456e-7■■■■■ 74
PTMA-211ENST00000468027 EFTUD2Q15029 972 aaKnown RBP eCLIP12.41□□□□□ -0.426e-7■■■■■ 32.4
PTMA-211ENST00000468027 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.11■□□□□ 0.816e-7■■■■□ 20.1
PTMA-211ENST00000468027 AATFQ9NY61 560 aaKnown RBP eCLIP15.83■□□□□ 0.126e-7■■■■■ 39.5
PTMA-211ENST00000468027 FUSP35637 526 aaKnown RBP eCLIP8.63□□□□□ -1.036e-7■■■■□ 19.8
PTMA-211ENST00000468027 NCBP2P52298 156 aaKnown RBP eCLIP11.91□□□□□ -0.56e-7■■■■□ 26.3
PTMA-211ENST00000468027 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.95□□□□□ -0.186e-7■■■□□ 18.2
PTMA-211ENST00000468027 SMNDC1O75940 238 aaKnown RBP eCLIP11.54□□□□□ -0.567e-7■■■■□ 24.8
PTMA-211ENST00000468027 METAP2P50579 478 aaKnown RBP eCLIP14.98□□□□□ -0.017e-7■■■■□ 19.8
PTMA-211ENST00000468027 SF3B1O75533 1304 aaKnown RBP eCLIP14.15□□□□□ -0.158e-7■■■■■ 99.3
PTMA-211ENST00000468027 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.9□□□□□ -0.348e-7■■■□□ 19
PTMA-211ENST00000468027 RBFOX2O43251 390 aaKnown RBP eCLIP10.05□□□□□ -0.89e-7■■□□□ 14
PTMA-211ENST00000468027 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.49□□□□□ -0.251e-6■■■■□ 22.4
PTMA-211ENST00000468027 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.27■□□□□ 0.041e-6■■■□□ 17.3
PTMA-211ENST00000468027 RBM5P52756 815 aaKnown RBP eCLIP16■□□□□ 0.152e-6■■□□□ 13.2
PTMA-211ENST00000468027 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.46□□□□□ -0.252e-6■■■■□ 25.9
PTMA-211ENST00000468027 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.83□□□□□ -0.22e-6■■■■■ 86.7
PTMA-211ENST00000468027 GTF2F1P35269 517 aaKnown RBP eCLIP14.29□□□□□ -0.122e-6■□□□□ 8.1
PTMA-211ENST00000468027 TROVE2P10155 538 aaKnown RBP eCLIP11.61□□□□□ -0.552e-6■■■□□ 15.9
PTMA-211ENST00000468027 PRPF4O43172 522 aaKnown RBP eCLIP12.28□□□□□ -0.442e-6■■■□□ 15.8
PTMA-211ENST00000468027 DDX6P26196 483 aaKnown RBP eCLIP13.8□□□□□ -0.23e-6■■■■□ 19.6
PTMA-211ENST00000468027 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.72■□□□□ 0.113e-6■■■□□ 18.3
PTMA-211ENST00000468027 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.28□□□□□ -0.444e-6■■■■■ 49.4
PTMA-211ENST00000468027 AKAP1Q92667 903 aaKnown RBP eCLIP11.35□□□□□ -0.598e-6■■□□□ 14.2
Retrieved 82 of 82 RNA–protein pairs in 28 ms