RNA–Protein interactions for RNA: ENST00000467076.5

FDPS-206, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene FDPS, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-206ENST00000467076 U2AF1Q01081 240 aaKnown RBP eCLIP16.87■□□□□ 0.29
FDPS-206ENST00000467076 ATG3Q9NT62 314 aa16.87■□□□□ 0.29
FDPS-206ENST00000467076 TFCP2L1Q9NZI6 479 aa16.87■□□□□ 0.29
FDPS-206ENST00000467076 LOC102724428A0A0B4J2F2 783 aa16.86■□□□□ 0.29
FDPS-206ENST00000467076 PRKAR2BP31323 418 aa16.86■□□□□ 0.29
FDPS-206ENST00000467076 SIK1P57059 783 aa16.86■□□□□ 0.29
FDPS-206ENST00000467076 RSPH6AQ9H0K4 717 aa16.86■□□□□ 0.29
FDPS-206ENST00000467076 ATF5Q9Y2D1 282 aaPredicted RBP16.86■□□□□ 0.29
FDPS-206ENST00000467076 PNPLA7Q6ZV29 1317 aa16.86■□□□□ 0.29
FDPS-206ENST00000467076 UBR2Q8IWV8 1755 aa16.86■□□□□ 0.29
FDPS-206ENST00000467076 MYH14Q7Z406 1995 aaKnown RBP16.86■□□□□ 0.29
FDPS-206ENST00000467076 LGR6Q9HBX8 967 aa16.85■□□□□ 0.29
FDPS-206ENST00000467076 PPP1R1BQ9UD71 204 aaPredicted RBP16.85■□□□□ 0.29
FDPS-206ENST00000467076 CICQ96RK0 1608 aaPredicted RBP16.85■□□□□ 0.29
FDPS-206ENST00000467076 RNMTO43148 476 aaKnown RBP16.84■□□□□ 0.29
FDPS-206ENST00000467076 ATP6V1AP38606 617 aa16.84■□□□□ 0.29
FDPS-206ENST00000467076 RALBP1Q15311 655 aa16.84■□□□□ 0.29
FDPS-206ENST00000467076 NFATC2IPQ8NCF5 419 aa16.84■□□□□ 0.29
FDPS-206ENST00000467076 RBM42Q9BTD8 480 aaKnown RBP16.84■□□□□ 0.29
FDPS-206ENST00000467076 MAP3K5Q99683 1374 aa16.84■□□□□ 0.29
FDPS-206ENST00000467076 C4AP0C0L4 1744 aa16.83■□□□□ 0.28
FDPS-206ENST00000467076 LINC00116Q8NCU8 138 aa16.83■□□□□ 0.28
FDPS-206ENST00000467076 GAS2L2Q8NHY3 880 aa16.83■□□□□ 0.28
FDPS-206ENST00000467076 AK7Q96M32 723 aa16.83■□□□□ 0.28
FDPS-206ENST00000467076 MTFR1LQ9H019 292 aa16.83■□□□□ 0.28
FDPS-206ENST00000467076 MSH5O43196 834 aa16.82■□□□□ 0.28
FDPS-206ENST00000467076 ITPK1Q13572 414 aa16.82■□□□□ 0.28
FDPS-206ENST00000467076 PHACTR3Q96KR7 559 aa16.82■□□□□ 0.28
FDPS-206ENST00000467076 SLC52A2Q9HAB3 445 aa16.82■□□□□ 0.28
FDPS-206ENST00000467076 MYBBP1AQ9BQG0 1328 aaKnown RBP16.81■□□□□ 0.28
FDPS-206ENST00000467076 GNAT3A8MTJ3 354 aa16.8■□□□□ 0.28
FDPS-206ENST00000467076 PTCD1O75127 700 aaKnown RBP16.8■□□□□ 0.28
FDPS-206ENST00000467076 PTGER2P43116 358 aa16.8■□□□□ 0.28
FDPS-206ENST00000467076 SLC4A9Q96Q91 983 aa16.8■□□□□ 0.28
FDPS-206ENST00000467076 KCPQ6ZWJ8 1503 aa16.8■□□□□ 0.28
FDPS-206ENST00000467076 FCHSD2O94868 740 aa16.79■□□□□ 0.28
FDPS-206ENST00000467076 PHF14O94880 888 aa16.79■□□□□ 0.28
FDPS-206ENST00000467076 HMGB2P26583 209 aaKnown RBP16.79■□□□□ 0.28
FDPS-206ENST00000467076 SMIM5Q71RC9 77 aa16.79■□□□□ 0.28
FDPS-206ENST00000467076 COL23A1Q86Y22 540 aaPredicted RBP16.79■□□□□ 0.28
FDPS-206ENST00000467076 SLC39A6Q13433 755 aa16.78■□□□□ 0.28
FDPS-206ENST00000467076 AMIGO3Q86WK7 504 aa16.78■□□□□ 0.28
FDPS-206ENST00000467076 GNPATO15228 680 aa16.77■□□□□ 0.28
FDPS-206ENST00000467076 SLC16A10Q8TF71 515 aa16.77■□□□□ 0.28
FDPS-206ENST00000467076 ZNF316A6NFI3 1004 aaPredicted RBP16.76■□□□□ 0.27
FDPS-206ENST00000467076 TEFQ10587 303 aa16.76■□□□□ 0.27
FDPS-206ENST00000467076 IL17REQ8NFR9 667 aa16.76■□□□□ 0.27
FDPS-206ENST00000467076 SGIP1Q9BQI5 828 aa16.76■□□□□ 0.27
FDPS-206ENST00000467076 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.75■□□□□ 0.27
FDPS-206ENST00000467076 NEFMP07197 916 aa16.75■□□□□ 0.27
FDPS-206ENST00000467076 MSL1Q68DK7 614 aa16.75■□□□□ 0.27
FDPS-206ENST00000467076 FLAD1Q8NFF5 587 aa16.75■□□□□ 0.27
FDPS-206ENST00000467076 PRKRIP1Q9H875 184 aaPredicted RBP16.75■□□□□ 0.27
FDPS-206ENST00000467076 SSFA2P28290 1259 aa16.74■□□□□ 0.27
FDPS-206ENST00000467076 CEMIPQ8WUJ3 1361 aa16.74■□□□□ 0.27
FDPS-206ENST00000467076 KDM3BQ7LBC6 1761 aa16.74■□□□□ 0.27
FDPS-206ENST00000467076 CNTNAP4Q9C0A0 1308 aa16.73■□□□□ 0.27
FDPS-206ENST00000467076 POLD1P28340 1107 aa16.73■□□□□ 0.27
FDPS-206ENST00000467076 MCM10Q7L590 875 aa16.73■□□□□ 0.27
FDPS-206ENST00000467076 RTF1Q92541 710 aaKnown RBP16.73■□□□□ 0.27
FDPS-206ENST00000467076 ARXQ96QS3 562 aa16.73■□□□□ 0.27
FDPS-206ENST00000467076 MAPK8IP3Q9UPT6 1336 aa16.72■□□□□ 0.27
FDPS-206ENST00000467076 DCTN1Q14203 1278 aa16.72■□□□□ 0.27
FDPS-206ENST00000467076 TTC5Q8N0Z6 440 aa16.72■□□□□ 0.27
FDPS-206ENST00000467076 KLHL34Q8N239 644 aa16.72■□□□□ 0.27
FDPS-206ENST00000467076 PLEKHF1Q96S99 279 aa16.72■□□□□ 0.27
FDPS-206ENST00000467076 DNAJC10Q8IXB1 793 aa16.71■□□□□ 0.27
FDPS-206ENST00000467076 FHDC1Q9C0D6 1143 aaPredicted RBP16.71■□□□□ 0.27
FDPS-206ENST00000467076 RTCBQ9Y3I0 505 aaKnown RBP16.71■□□□□ 0.27
FDPS-206ENST00000467076 LAMB4A4D0S4 1761 aa16.71■□□□□ 0.27
FDPS-206ENST00000467076 CRKLP46109 303 aaKnown RBP16.7■□□□□ 0.26
FDPS-206ENST00000467076 PNNQ9H307 717 aaKnown RBP16.7■□□□□ 0.26
FDPS-206ENST00000467076 BTBD11A6QL63 1104 aa16.69■□□□□ 0.26
FDPS-206ENST00000467076 RC3H1Q5TC82 1133 aaKnown RBP16.69■□□□□ 0.26
FDPS-206ENST00000467076 RPS6KA4O75676 772 aa16.68■□□□□ 0.26
FDPS-206ENST00000467076 WDR43Q15061 677 aaKnown RBP eCLIP16.68■□□□□ 0.263e-7■■■■□ 25.4
FDPS-206ENST00000467076 NFE2L2Q16236 605 aa16.68■□□□□ 0.26
FDPS-206ENST00000467076 TRAPPC3LQ5T215 181 aa16.68■□□□□ 0.26
FDPS-206ENST00000467076 ZNF790Q6PG37 636 aa16.68■□□□□ 0.26
FDPS-206ENST00000467076 HEG1Q9ULI3 1381 aa16.67■□□□□ 0.26
FDPS-206ENST00000467076 KCNQ3O43525 872 aa16.67■□□□□ 0.26
FDPS-206ENST00000467076 CCDC146Q8IYE0 955 aa16.67■□□□□ 0.26
FDPS-206ENST00000467076 ZNF496Q96IT1 587 aaPredicted RBP16.67■□□□□ 0.26
FDPS-206ENST00000467076 SYT17Q9BSW7 474 aa16.67■□□□□ 0.26
FDPS-206ENST00000467076 HTATSF1O43719 755 aaKnown RBP16.66■□□□□ 0.26
FDPS-206ENST00000467076 VSIG10Q8N0Z9 540 aa16.66■□□□□ 0.26
FDPS-206ENST00000467076 ARHGEF1Q92888 912 aaKnown RBP16.66■□□□□ 0.26
FDPS-206ENST00000467076 CCDC87Q9NVE4 849 aa16.66■□□□□ 0.26
FDPS-206ENST00000467076 KIF13BQ9NQT8 1826 aa16.66■□□□□ 0.26
FDPS-206ENST00000467076 CYP19A1P11511 503 aaPredicted RBP16.65■□□□□ 0.26
FDPS-206ENST00000467076 ADRA2BP18089 450 aa16.65■□□□□ 0.26
FDPS-206ENST00000467076 RFC4P35249 363 aa16.65■□□□□ 0.26
FDPS-206ENST00000467076 INTS5Q6P9B9 1019 aaKnown RBP16.65■□□□□ 0.26
FDPS-206ENST00000467076 FMNL2Q96PY5 1086 aa16.65■□□□□ 0.26
FDPS-206ENST00000467076 SCN7AQ01118 1682 aa16.65■□□□□ 0.26
FDPS-206ENST00000467076 AFDNP55196 1824 aaKnown RBP16.64■□□□□ 0.25
FDPS-206ENST00000467076 THUMPD2Q9BTF0 503 aaKnown RBP16.64■□□□□ 0.25
FDPS-206ENST00000467076 ZBTB1Q9Y2K1 713 aa16.64■□□□□ 0.25
FDPS-206ENST00000467076 CHD4Q14839 1912 aa16.64■□□□□ 0.25
FDPS-206ENST00000467076 BCORQ6W2J9 1755 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms